Array 1 63152-64335 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VEVL01000107.1 Klebsiella pneumoniae strain AHEPA1046 Contigs3_2_len_T:131914, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     63152	    29	  96.6	    32	.............A...............	AGAGGACTGGCACGTCACGCCCTGCTGCGGAC	
     63213	    29	 100.0	    32	.............................	CTCCCCGACGGAATGTACGGCAATGACTTCGT	
     63274	    29	 100.0	    32	.............................	TTGCGGACGTTCAGACGCTGCATGGCGTTCTC	
     63335	    29	 100.0	    32	.............................	TTATCAATGGGGAAAAATCTTCATTTGTAACT	
     63396	    29	  93.1	    32	............CA...............	AATCCTGGAGCTGGAAAGGGAGCTTGCCTCGC	
     63457	    29	  93.1	    32	............CA...............	GCACCCTGGGATGCCTTTTGCACAGTGTCAGG	
     63518	    29	  93.1	    32	............CA...............	GCACCCTCACGGATACCTTTTGCACAGTGTTA	
     63579	    29	  93.1	    32	............CA...............	GAAAGTAGGGGCTACGCCGGAATTCCGAAGAG	
     63640	    29	  96.6	    32	A............................	TTACTTTTTGGCAGTTGGTAAAACACTTTTGC	
     63701	    29	  96.6	    32	..............A..............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
     63762	    29	  96.6	    32	..............A..............	CACTACCAGATCCGAATGGACACCCGTAATGA	
     63823	    29	  93.1	    32	............CC...............	GAATGAGAGCAAAATAATGAAATTAACAGGAC	
     63884	    29	 100.0	    32	.............................	CTAATGAGCGGTATATTTTTTCTAATCTGAAA	
     63945	    29	  93.1	    31	............CT...............	TGACTTTTAAAAAAATCAGCTGAAACAGCCG 	
     64005	    28	  93.1	    32	..........-..C...............	TGCGTGCAGTAAACGAAAATACATCGGTCAAT	
     64065	    28	  96.6	    32	..........-..................	AATGGTGACAGGCAGTGCACCGGCCTAGAGGC	
     64125	    28	  93.1	    32	..........-..C...............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
     64185	    29	 100.0	    32	.............................	TAAAAGCGTTTTACATGCATTCAAAAAAGTTA	
     64246	    29	  96.6	    32	.............C...............	GGCATGAGCGAGAACCACTGCGAGAGTGTGGT	
     64307	    29	  69.0	     0	..........A.CA.........ACCTTC	|                               	
==========	======	======	======	=============================	================================	==================
        20	    29	  94.7	    32	GTATTCCCCCCGTGTGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  CACAAAGTCACAACAACAGTCAGCAAAAACCACGCGATGATCGTTATTGAGGATTTGAAGGTTTCCAGCATGTCAAAATCTGCAGCGGGTACGGTAGATGAGCCGGGGCGCAACGTTGCGGCAAAATCAGGTCTTAACCGGGCGATACTGGATCAGGGCTGGTACGAAATGCGCCGCCAGCTCGAATATAAGCAGCGCTGGCGTGGCGGGGAAGTGCTGGCAGTAAATCCGGCCTACACCAGCCTGAAATGCGCCTGCTGTGGTCATACCGCGAAGGAAAACCGTCAATCGCAGGCAGTATTTGTCTGCGTGGCGTGTGGTTACGAAGCGAATGCTGATGTAAACGGCGCGTGTAATATTTTAGCGGCAGGACATGCCGTACTTGCCTGCGGAGGGACGGTGCAGTCAGTCCGCCCGATGAAGCAGGAACCTGGCACTGAGCGATCAGTCGTCACCCACTAATAATGGGAATCCCCCTCCTGAATCTCGCAGCGTGAAGG

# Questionable array : NO	 Score: 5.44
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.38,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGTGTGCGGGGGTTATCGG
# Alternate repeat :   GTATTCCCCCCGCATGCGGGGGTTATCGG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-10] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-40.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0.74   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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