Array 1 36214-37462 **** Predicted by CRISPRDetect 2.4 *** >NZ_RZAY01000012.1 Escherichia coli strain URMC_126 NODE_12_length_156341_cov_16.439419, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 36214 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 36275 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 36336 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 36397 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 36458 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 36519 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 36580 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 36641 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 36702 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 36763 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 36824 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 36885 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 36946 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 37007 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 37068 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 37129 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 37190 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 37251 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 37312 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 37373 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 37434 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //