Array 1 28801-27433 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUBW01000036.1 Klebsiella pneumoniae strain 188F9 contig_00036, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 28800 29 100.0 32 ............................. CATTTCATAGTGATTCGACTATTTAATTAACA 28739 29 100.0 32 ............................. AGTTCACGACAGGCAAAGTCTTTACGGTATGC 28678 29 100.0 32 ............................. TCTGCTGGTTACAGGAGAAAAAAATGATTGGT 28617 29 100.0 32 ............................. TTATTTCTAAACTAAGTTTTGTTTCATGCAGT 28556 29 100.0 32 ............................. TTTTTTTGACGAAGACGGCAACGAGTTAGAAG 28495 29 100.0 32 ............................. GTCTCTGCCAGTTTTACCTGCTCAGCGGATAA 28434 29 100.0 32 ............................. TATTTTTGAGATGATGGATTGTTGCACACCAG 28373 29 100.0 32 ............................. CGCTTCTCGGCTTCTCTGAATTTATCCGCCCA 28312 29 100.0 32 ............................. ATCCCGACCCGCTCCTCCAGAGCGAATACGAT 28251 29 100.0 32 ............................. TGCTTTATGGCAAATAAGAGAGGATATAACCA 28190 29 100.0 32 ............................. GCGTCCGCCTCCCAAATAGCCAGGCTGTTATT 28129 29 100.0 32 ............................. TAAATCCCAGCTGGTTTGACGTAGTGGCACTG 28068 29 100.0 32 ............................. CAATGAAGGCTTATAAGGGTGAAGAGAGCAGG 28007 29 100.0 32 ............................. CAGTCGGTAACGGCTGGGCGTGACCTCAAAGC 27946 29 100.0 32 ............................. GTGCCATTTTTATTTTGCTTAAAATAAATATC 27885 29 100.0 32 ............................. CCTATTGTGTTCAGTCGTAACAGCTGAATCAG 27824 29 100.0 32 ............................. GGCGCGGCGGAATAACCACTTTATGAGCAGGT 27763 29 100.0 32 ............................. GCGACCATGCCGTAGTCTTCAATGACGTAATC 27702 29 100.0 32 ............................. CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 27641 29 96.6 32 .....A....................... TAACAGGGCCATTTTCCCGGGTTGCCAGACGA 27580 29 100.0 32 ............................. TCACCCTCGTAGCCGATACCACTTTCGCGCAG 27519 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 27461 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 23 29 98.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTTAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGTACCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //