Array 1 57585-60315 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJODG010000001.1 Phocea massiliensis strain NSJ-153 DNF-D8-22_ctg001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 57585 33 100.0 33 ................................. TCTCTTATGCGAAGAAAGTGGAAGTAAGGGCGG 57651 33 100.0 35 ................................. TCAAATTCTTTGCAATCATCTTCGTACCTTGCCTT 57719 33 100.0 33 ................................. GTGAAGTGTTTATTGTGATCGGGCGCAAGAACG 57785 33 100.0 34 ................................. TCAAACTGTGCGGCGGTCGTCTTGCTTCTGATCC 57852 33 100.0 35 ................................. TTTCTTGCCACGCCCAAACATTGACAAGGCAGAGG 57920 33 100.0 34 ................................. AGTAATGAAAAAATATCAGTTGGGCGCGCTGACC 57987 33 100.0 35 ................................. TCGTATGCCGCTTTACCCTCTGCAACATACTTTTG 58055 33 100.0 35 ................................. CTGTTCAACTTCAAGGACTATGTGCTAAACACCAA 58123 33 100.0 33 ................................. TCAAAACCTATTGACATATACGCATTGAAGGCG 58189 33 100.0 34 ................................. CACCGCCATAGTCCCACCTACTAACGGCAGAAAC 58256 33 100.0 34 ................................. TTATTTGTCGGCTGGCGAAGCCAATGCTCCATAA 58323 33 100.0 35 ................................. ATCCAGAATAAAAAGCTGATACTCCATCAAGGCGT 58391 33 100.0 33 ................................. TTATGCTCTGTACTGAGATACCAATTTCACTAG 58457 33 100.0 35 ................................. GCTATCGTAGTCGTTAAGCATATCTTCCCACGCCT 58525 33 100.0 34 ................................. CTTGGTATCCCACTGGATGCGGTAGATGGGGCTG 58592 33 100.0 34 ................................. CACCAAGGTGCCAGTGCTGCGAGGCTTGACAAAC 58659 33 100.0 34 ................................. TTATTTGTCGGCTGGCGAAGCCAATGCTCCATAA 58726 33 100.0 33 ................................. GTCGGCTCCCATCAGCATATAAGCGGCCTTTGC 58792 33 100.0 36 ................................. CTTTAATCTGCGCCGCCCTCTGCTCGATCTGCTCAA 58861 33 100.0 34 ................................. TTCAAGTCAAAATCTCCTTTCTGCCGCAATTTCT 58928 33 100.0 39 ................................. ATCTAATTACGGTCACCCACTGGATGCCGCTGCCAGAGC 59000 33 100.0 35 ................................. ATCCCGGGACAGGTGGATAAACATCTCCCCCTCAC 59068 33 100.0 34 ................................. TTGACGATCCCGGAGAAGATGCGGGCGGCTCTTT 59135 33 100.0 34 ................................. TCCATCATCAAGGCTTGCACCTGAAAGACAGTAC 59202 33 100.0 33 ................................. CTACACCGTTAGAATAACCTACACCCCTATACG 59268 33 100.0 34 ................................. CCACACGCGCAATTAACGCAATGTTGCGGAATGG 59335 33 100.0 34 ................................. ACCGCCCAGAAGCCGGGGGGAGCCTGCCACCTGC 59402 33 97.0 34 ...G............................. CGGTAGATGGCGCGGGTGACAGCGGCGCCGCCCA 59469 33 97.0 34 ...G............................. TCTACAGCATGCTTCTTATTATAGGAAAGCAGAT 59536 33 97.0 37 ...G............................. ACAGAGAAATGCCATATTGCAGGCCATGTGCTTGTAG 59606 33 97.0 35 ...G............................. ATCTTGCTTACCTCTCAATCATTTACCCCACATCT 59674 33 97.0 33 ...G............................. CTCGCCAGGCCAGTCAATGAGACCGGCCACAAA 59740 33 97.0 35 ...G............................. TCCTCTTTTACTTCTTGGAGCCATTCTGCCGGGGG 59808 33 97.0 35 ...G............................. TTTGCCATGGTCTATCCCTCCTGTCTGGCGAGGTA 59876 33 100.0 35 ................................. ACCGCCCGGCCTGACTGGTACCGGGCCACGGGGAT 59944 33 100.0 35 ................................. TTCCAGTTTTGCGTTGGAGTTCTTCCCGGCTGGTG 60012 33 97.0 36 ...G............................. TGGTAACGGCGCAGACGGAAAAGAACCTGGAACGGC 60081 33 97.0 34 ...G............................. TACCAGCGAAATCTATGTCAAGGACGATGTGGCA 60148 33 97.0 35 ...G............................. GGGTGACAGGCGTATCCCGGACTTCGAGAAGCGGG 60216 33 97.0 34 ...G............................. AGCTCAAAGGACCAGTTGAGGCCGTACCAGATGA 60283 33 97.0 0 ...G............................. | ========== ====== ====== ====== ================================= ======================================= ================== 41 33 99.1 34 GTCACCCTCCGTGAGGAGGGCGTGGATTGAAAT # Left flank : AGCAGCAAAGGGACAGATGTGGACCGGATACAGCTGTGCGCCCAAGCAATGGCTTTAGAGGAGATGTTGGTCTGTGGAATCACCCATGGCTATCTTTACTATGGGGAAACCCGCCGCAGGGAGCAGGTGGAGTTTACCTTGGAACTGCGCAACCAAGTGGAGTCGCTGGCCAAGGAGATGCAAGGATATGCACAGCGGGGATACACCCCCAAAGGGAGGTTGCAAAAGCATTGCAATGCCTGTTCTTTAAAAGACGTCTGTCTCCCCCAGCTGTCCCGAAGCCCCTCTGTTAGGGAGTATATCGAACAAAGGATGGAAGAACTTGTGTGATGTGCGAATCGGAAGCGGTCAGAGAACTCCTGAAGGGTTCGCACCAAATTGATGGAAAAAAAGGAGGACACAAAGCGGAATTTTTTGGATTGTATTCCATAAAAAGTAAAATCAGACAAATGCAGCATATAAATGCTAAAATTAATTGAAATATTTTGTGCAAAGTTGCT # Right flank : TATAAAAGAGAAGCTGGGCATTCAGTATTACGGGCGTCGCCTTCCGCGAGGAGGCAGTGTGGACGCTGCCTAGAAATCCGATTGGAAAGGGGAAGTTATGAAACACCTGCTCAATACCTTATATGTTTTGTCAGAGGATAGTTACCTTTCCCTCAATGGGGAGAACGTAGTGGTCTCCCAGGGGGAAAATCAATTGGGGCGGTTCCCCCTGCACACTTTAGAGAATATCCTTTGCTTCAGTTACAAAGGGGCAAGCCCTGCCCTGTTAGGTGCTTGTGTCAAACGGGGTATACATTTCTGCTTTTTTACCCCCAATGGACGGTTTTTAGCCCGGGTTTGCGGAGAGACATCGGGCAGTGTTCTCCTTCGCCAACAGCAATCCATCGCGTCTATGGACCCAGTGCAGACAGTGCGGTTTGCAAAAAATCTGCTGATGGGAAAAGTATACAATTCCAGATGGGTCTTAGAACGAGCGACAAGGGATCACCCCCAGCGGGTGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCCTCCGTGAGGAGGGCGTGGATTGAAAT # Alternate repeat : GTCGCCCTCCGTGAGGAGGGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA //