Array 1 50979-50711 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMWR01000010.1 Gilliamella mensalis isolate 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 50978 28 100.0 32 ............................ TGACGGCTACAAAGAGCTTGTTATTGATAAAA 50918 28 100.0 32 ............................ TTCAATTAGTAGAAACCTTCACCGACTATAGT 50858 28 100.0 32 ............................ TACGATGACAGTATGAATATAAACGGGGCGGT 50798 28 100.0 32 ............................ GTGTACGTTTTCGCTCCACACCGTGGTAATAG 50738 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 100.0 32 CTTCAATGCCGTATAGGCAGTTTAGAAA # Left flank : AAAGCAGATATACAGCAAAAATCATCAATTAGCGATTATGCTTTACTGATGCCTATCAAAACCGTACCGACGACGATAAAAGGCTATTTACGTTTTAGCCGAGTTAACCCTAAAGGTCAAAGTGCGTTAAGGCGTGCCGAAAAACGATTAACAGCACAGGGAAAATGGACACCTGAAGTGAAAAATAAAATGATTGAAAAGTGGGGAAGCGTTCATTTGCAATATCCACACCTTCATTTGCATAGTAAAAGTACAGGGCAAAAATTTATTTTGTGGATAAAACAAGAAAAATGCCTAGAGCCAGTACAAGGCAACTTTAATAGCTATGGACTAAGCCAAACCGCAACAGTTCCCGATTTTTAAATTTCTAACCCTTTTTTTGGGGATGATTTTAACATATTGATTATTATTGATATTAAAATAGAGACAAAAAAAGGGTAAAAATTGGGTAAAGTGCAATATGCTCTTTTATAATAAGGAACTATTGAGATAAAATTCTA # Right flank : CGTTGTTATTTTGCGCAGAGTTAATTCGGTAACTTCAATATTTCAATTAAAGCGTGTATCACTTTTTTCGGCTTTCTTAAGCTTGAAACGGTATAGAATCCTGAATATTTTTTACAAAAAATATCACCTAAAAAGTGAACCGTTCAACTTTAACCAAACGTTTAATTCCATAACCGATGGTTTTATCAGGTTCTCACGGGTTAAGGGGGGATAGATAGCTTTCATTGAGCTTTCTTTAGCACGTTATAGATGGTCAAATAACTGACCATAAAACGTTTAGCTAAATCAGTGAAGGTTAGTTTTCTTTATGATATCGCGCCATATCTCTTGTCTGTGATATGGCGTTATTTTGGTTTTTTATCGATATTTATGACCGTATTTTTTCTAATTACTGTAAATAATGCGAGTAATTACTACACATTATTAGCATAAAAGCATTACTATTCAGCACCAACTTGCGAAGTCATTTTTATCTCTCGATTATCGGTAATTTCTAAATT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAATGCCGTATAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched CTTCACTGCCGTATAGGCAGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.80,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 72704-72369 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMWR01000005.1 Gilliamella mensalis isolate 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 72703 29 100.0 32 ............................. TTAGAGCAATTCATAAAAGAATAACGTTTCAA 72642 29 100.0 32 ............................. CGGACAATTGACCAAAATTCACTTTCTCACAT 72581 29 100.0 33 ............................. GTAAAACAATACAAGCCAAACAGATTGAAATGC 72519 29 100.0 32 ............................. TTTTACTTCGTAATCACATGGTAATAAATTCA 72458 29 100.0 32 ............................. GGCAGAAAAATGGGTAAAGGTTCAGGAAAGGC 72397 29 93.1 0 ..........................A.A | ========== ====== ====== ====== ============================= ================================= ================== 6 29 98.9 32 GTGTTCCCTATACACATAGGGATAAACCG # Left flank : ATGGGCCTATGTCGCTATCGGTTTTGCATTAAAAAAGTAGATTTTAAATAGGTTATCTCATTGCTCACAATCTGTTGGTTTCCAATAGGTTATTACCTCTTATTGTGGGCAAAATAAAGAATTGGTTGGTATATTATATTAATCAGCAATGTGAGTTTTGTGAGTGATAATCATGATACCATTATTTTTACTCGTTCCGACAAAGTCCTATTCCTCTTGGTTCAATCTGTAACTAAAAGTTAATCATAACTAAATTATCCATTTCAAAAGAACTAATAATAAATTTTCACCTATCATTTTTCTATAAGTGTAAGAAATTTAAAGATTAGTTGGTAAAATAAGAAAACGGTTAATATGCCATTTTTCATCTTTAAATTTTTATAATAAAAACAATTGTTTATAAGATAATTCATTTTTAAAAAAAGTTAAAAAAAGTTAAAAAAGTTGGTAGAATTTTGTACTTGAATATTTTAATTATAAAACAATATGTTATAATTAGA # Right flank : CATAAAACGATTTTGAGTAAAGCCTTTGATAGGGAGAATCAGATTATTTTAAGTGTAGTGTAAACAATTTAGCTCTTTTTATAACTAAATTTTAACTGTTTGATATAATTTGTTTTTATTGAATCAACGATGGCGTTGATATAATGTGTCTAAAATATATCGTAATTTTTTGACCTCTAATTGGCCGGGTGCCGATGCATTTTTAGCTGCTCCAAAGGTCATTGCTGAACCAAATGTGGAGCCTGCTATGCGGCTAATGATACCAAGATCTGCCATCGACATAGTGATAATGGGTTTTGTGGCGTATTTTTCGTTCATTTCAGTGGTTGCGGCAAGTAACGTTAATACATCATCGGTTGTTTGTGGCATGACGGCAATTTTAGGAATGTCGGCACCCAGATCTTGCATCTTTCTTAATCGATAGATGATATCGCTTTTAGAAGGGGTTTTTTCAAAATCATGGTTTGATGCGACCACAAAGACTCGATTTTTGTGTGCAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTATACACATAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: R [matched GTGTTCCCTATACACATAGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 99367-100353 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMWR01000012.1 Gilliamella mensalis isolate 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 99367 28 100.0 32 ............................ CGAATCAGTGAAAGCCGATTTTTGGGCTAAGA 99427 28 100.0 32 ............................ AACCTGAAAGAAAAGGGTGCAATAACCGATCA 99487 28 100.0 32 ............................ ATGTACATAAAAAAAATAGCGGAGCAGTTTTT 99547 28 100.0 32 ............................ AATTGTAAATTGATTTTTAGTTGACAGAAATT 99607 28 100.0 32 ............................ AAGAAACAGAGTGATTTGTACGCAAATGCGGT 99667 28 100.0 32 ............................ CAGGCGGGGATTACGAAACGCTTGATTCTATG 99727 28 100.0 32 ............................ TCGTACCCATTATTAAAATTGTCATCAATTAC 99787 28 100.0 32 ............................ CCTATAGAAACACTTGTATTTTTCTTAATGAC 99847 28 100.0 32 ............................ GTATTCAAATACTAGAAAAGATTTGATTCAAC 99907 28 96.4 32 .....A...................... TTAACGACAATGTCAGCCGCATTGCCGTTCAT 99967 28 96.4 32 .....A...................... ATGCTGGCGTATCTTCGGCATTAGTTGCATTT 100027 28 96.4 32 .....A...................... TGCCGCCATTTGAGCTATCCAATAGTGTAACA 100087 28 96.4 32 .....A...................... CTCCATCAATGAACACGTATTGGCGTAATTTA 100147 28 96.4 32 .....A...................... ACTCATGTCAAATGGCGGATCGGTGAAAATCA 100207 28 96.4 32 .....A...................... GTTCGAATTCTGTAAATGGAATGGCAAAAAAT 100267 28 96.4 32 .....A...................... TCTTGCCGAGCATTTTTTGATTGGTTCTCCTG 100327 27 89.3 0 .......................-T..T | ========== ====== ====== ====== ============================ ================================ ================== 17 28 97.9 32 GTTCACTGCCGTGTAGGCAGTTTAGAAA # Left flank : TAGGTGCTATATCATAGCTGATTTGTTGTTATTTTTCTATCTGCGGGCTTTTTTATTGCTTTATTTTGAATAAATCTAAGGTTAATAATTTCTTCCATTTTTCACGTATCAAAAAAACATCGATCTGGTCGCGCTCCTTGATTCTATTACTGATTGAAAGTTGTTGATGAACATTATTTAATATCTTTTAAGAAAAATAGAAAGAAAGTTAATTGATATAGGCTATTTTTCTATTTATAGGTAGATAAAATTCGAAAACGCTTAACGCTATTTTTAAGGTTTTTATTAAAAATCTAAGCAAATTGGTCTTTTGAGTTTTAGGTTTGGGTTGTACTACGTCATAATAAAGTCCAAAAACTAAAAACCAGAACCCTTTTTTTTGCCATATTTTAAAAATAAATAAAATCAAATAATTAAAAACGTCCTTCAAAAAAGGGTTTTTAAAGTCTAAATAGCTATTTGCCTTTTTACATACAATATTGATAGTATATTAACTTCTA # Right flank : TTAATCACGAAACGGTATAGAATCCTGAATATTTTTTACAAAAATATAGCCTAAAACGTGACACTTGTGTAACTACTTCATAATGGGCATACAACTTAGTAAAAAATTACGCTGCTTGTTTTTGTGTTGTATATGCAATGGGTATCATGTTAGTTAATGCTTAATTAGGTTTTTGGGTATTATCAATGGTTGGATGACTGACCATAACATGTTTAGCCAAATCAATGACGGTTATTTTTTCTAGGGTATTATCGCCATAGCACTTGTTGATGATACGGCGATAATTTTGTTTTATGTATATTCAGTACAGTCGTTTTTTTACTACTGTAACCGACGCGAGTGATTTCTACACATTATATTAGCTGATTGCTCCCTATTTTGCCATTTTGAGAGTATCTATCTGTTTCACTGATGTAAAATCTATAGCTAATAATTTTTCTAATCGTGCAAGTATCCAATTATACCGATCTTTTAATGCATCTTCATGCCATTGTTGGTTA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGTTTAGAAA # Alternate repeat : GTTCAATGCCGTGTAGGCAGTTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.20,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 48429-48280 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMWR01000001.1 Gilliamella mensalis isolate 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 48428 29 100.0 31 ............................. CAAACATATTTGCAGATTTATTCGCTGGCAG 48368 29 100.0 31 ............................. ATTATATGACACGCACCGACATAATCCCCCG 48308 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= =============================== ================== 3 29 98.9 32 GTTCACCGCCGTATAGGCGGTTTAGAAAA # Left flank : AACCAAAGGGGACGATTTTGAGGGTTATGTTGGTAAAACCATTCTAATCGACTTTCAACAGAAACAGGCTCCGTATCAGCAGTCACTTGGCGACCAGCAATTGTTGAATTATAAACATCGACAATAAAGGGTAAATCTTCTAATGTAGCATCGTGGTAAGTGATCATGTTTTTTGCTGTAAGTGGTTTAAAGAAAAATTATTGTAGTTTTATTATTGATTGTAGGCAATAAGGGATATTTTTATCATCAGGAAAATACGGCGTAGCAATGGTTTACGGTTAAATAAAAAATTCAATAAAATCAATAATCTACTTGGGTGTTTTTTTTACAATAAAATTTACTCATTATCAAAAAATCAAAAATTTAGCTAACCCTTTTTTTTATCAATAAATAAAAATAAATAAAAACAACAAATTAAAATAGCCTTGTAAAAAAGGGTTTTTTAAAACAAAAATCCTATTTGCCTTTTGTCAAACAAGCTTGATAGTATATTGGCTTCT # Right flank : TCCCCTAACCTAGACAATTCATTAAACATAGATTCACCGCCGTACGGCAAGCTTAATCGATTAATTAATATAAATTTTACCGATTACTGTCTTTTAATTTCTCTCTAACACTAAACAAAATTTAACGTTTTCATTTTGTTTTTCTTCTTAAACATGTATTTTATATATATCTTTAATTAAGAAGATAAAATTAGGAGGTATTATGTTTTGTATTCAATGTGAGCAAACAATAACAAAATCAAATAAAAAAGGCTGTAGTTATGTAAAAGGGATGTGTGGTAAAACAGCTGAAGTTTCTGATCTGCAAGATGTTTTAGTTGCAAGTTTACAAAAAATTTCATTTTGGGCTTCTGTTTGCAGAAAATATCAAATTGTAAACCGTGAAATAGATAGATGGTCATGTCAAACTTTTTTTTCAACATTAACTAATGTCAATTTTGATGCAGATAGAATGCTAGCTTATCTTGATCAAGCACAAAAAATTAGCCAACAATTGCAAC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGTATAGGCGGTTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.50,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 228003-227434 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMWR01000014.1 Gilliamella mensalis isolate 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 228002 29 96.6 31 ............................A TTGCTCGACTGAATTTTTTATCTAAAGCATC 227942 29 100.0 31 ............................. ATACCTGCATATTTCGTGAGGCATATTTACT 227882 29 100.0 31 ............................. AACCTAAAACTAAAACTAAAAGGTTTGTTTT 227822 29 100.0 31 ............................. CCGCGGGTAAATAGTAGCGACGTAAGATCAA 227762 29 96.6 31 ............................C GTTAAATGTGCTGAACTGTCTTTATTAAAAT 227702 29 96.6 31 ............................A CAATTACTACACAATCGAAAAATAGGCTTCG 227642 29 100.0 31 ............................. AGGCGGTATGGGGGAGAGGCGGGATTTATTA 227582 29 100.0 31 ............................. AGGCAAATTTTTACAACCGCGAAAAATGAAC 227522 29 100.0 31 ............................. GTAGCCAGTCCAAAATTGTGTTTTTATACAT 227462 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= =============================== ================== 10 29 98.6 31 GTTCACCGCCGCATAGGCGGTTTAGAAAT # Left flank : TACCAATTGTAAAAAAGTATCTAAAAGCTCTGCCGACAGACCATCGGTTTTATAATTATGGAATTGATAAGTTATGTGATGATCATCAAGCCAAGTAAAAGCCTTTTTCATCGTATTGCAGTTTTTAATACCATAGATTATGTACATAATCAGTGATCCAAGTCTGAAAAATATGAGAAGATTATAACAGTTATCAGCATGCAGCAGCAAATCGGAGCTATCTATTAGCTAAGATTTTTTTTAGTTGTTTTTGTCATTAATTTTTCACTGTTTATATTGCCTTAAAAAAATCAAATAAAATCAATTCATTACCTGAATGGTTTTTGCGTAACAAATATACTTAATATCGACATAACCAAAATCCTACCAACCCTTTTTTTTAACTAAAAATAAAATATAATAAAAACAATAAATTATAAAAGCTCCCCAAAAAAGGGTTTTTAAAAACAAAAATCCTATTTGCCTTTTGTAATACAGGGGTTATAGTATGTTCGCTTCTA # Right flank : TCCTTTATTTATTCTAACATCTATCAACAAAGTAATGCATAATACGATTATCGGTTGTTAGTTCGGGATGAAAGGCGCAAACTAAGATGTTATTTTGCTGTGCCATAATACAGTGCTGATCGACAAATGCCAGTTGCTCAATGCCTTTTCCTGCTGTGGCAATATAAGGTGCACGAATAAACACCGCAGGAATTTGTTGCCCAATAGGGGGGATATCTAAATTTGTTTCAAAGCTGTTAACCTGTCGACCAAAACCATTTCGTTCAATACAAATATCGATTAAACCCAACAATTCGACTTCGTTATGGGTTGTTGTTTGCCCACAAAGCACAAGCCCTGCGCAGGTGCCTAAAACACCTTTGCCTTGCTTGGCAAATTGTTTTATAGGCGCTACAAGTCCATTTTGTTTGATTAAACGGCTAATTGTGGTGGATTCGCCTCCGGGGATGATTAAACCGTTTAGCTTGGTTAAATGTTCGGGTTTTTGCACTAAAGTCGCT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGCATAGGCGGTTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 202254-202642 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMWR01000008.1 Gilliamella mensalis isolate 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 202254 28 100.0 32 ............................ TATGAGGAACTTTTAAAAAAAAGCAACAAAAG 202314 28 100.0 32 ............................ CGGGTCGTTGAAGTTTGTTGGTAAAGTGTTTT 202374 28 100.0 32 ............................ GATTTGAGCGATGTTTTCCGCCGGTAGAATTC 202434 28 100.0 32 ............................ AGTCAAGAGCGGCGCACGAATCAGTCTCTACT 202494 28 100.0 32 ............................ AATATCAAAAATATTTCAGCACAAGACCTTTT 202554 28 100.0 32 ............................ AAGCGGTGTATATTTATAATGATGTCCATCTT 202614 27 89.3 0 ...............AT.......-... | AA [202635] ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.5 32 CTTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : ACAAAGCACAAACACGCCAAACATTCCTGCTTGGCGTGTGACCTTATTCTGTTATCGGCACATTCTGACTCAGGAATAACAAAAACAACATGGCCTTGGGTGTTTTTTATGAGTTGCTTTTTTTATTAAAAAACAGTGCATCACTATCCAAAAAACTGTTAGAAAACGCATTGATTTTATTTAAGTTTTTATTTATTGTCAAGCAAAATAAACAGTTTACACAACCATGTCAGGACGCTAGTAACTAATAAATCCGCAAAACCAAAAACAGCATACCCAGATAAAAGCTATTTAACCTAAAAAAGTGTCAGGAAAAATATTAATTTTATTTGATTTATTTTCTGGTTTTTTTGAATACACAATCTTACAAACCCTTTTTTTAACGATGATTTAAAATTCAATAAAATCAAAATATTAAAAAACAGCTCAAAAAAAGGGTTTTCAAAGCCAAAATTGTTGTTTATCTTTATACAGAAAGATTTATCGAATCTTAAGTTCTA # Right flank : ATAATCAGATAATTATAAAAAAATAATAACCCCCCCAAAAAATAATTGGCTATGTTGTTTGTTTTACTTCGCGCGGGCTGGCGCAGGTCACATTTTGCAGTCAAAGCGTGGGTTGTTAGGGAATTTGCTAATTCTATAACTCGGACGTGATCACAATAGTTATTTTGAACACTAAACTGCAAACGTTCGACCTCCAACCCTCCACACTTAATTCATTCTATTTAGCAAAAAAAGGCTTTATTTTTCATCAAAAAATAGTTCAGGAAAGATATTGATTTTATTTAATTTTTTACTTGACTGTTTTGTGGAGAAAACAAACTAAGGTTACGTCGATAGTAAGATAACAGGCAGCATATTTATAATTATAAAAAGTATAAAAGCCATTAAATTATAGAAACCATATCCCCTGATAAAATAGGCAACAGGCGGTGATAAAATTGCGATATGGATGTTGCACGGTGAGCGTAATTGATATTGTTAGGGAATTAATCATTTCTAAT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //