Array 1 1739968-1742617 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPAI01000016.1 Klebsiella pneumoniae strain JHTS009 tig00000186, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1739968 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 1740029 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 1740090 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 1740151 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 1740213 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 1740274 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 1740335 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 1740396 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 1740457 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 1740518 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 1740579 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 1740640 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 1740701 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 1740762 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 1740823 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 1740884 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 1740945 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 1741006 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 1741067 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 1741128 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 1741189 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 1741250 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 1741311 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 1741372 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 1741433 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 1741494 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 1741555 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 1741616 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 1741677 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 1741738 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 1741799 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 1741860 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1741921 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1741982 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1742043 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1742104 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1742165 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1742226 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1742287 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 1742348 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1742409 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1742470 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1742531 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1742589 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //