Array 1 13236-13602 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PTVU01000043.1 Enterococcus faecalis strain CVM N60392F N60392F_S50_L001_R1_001_contig_43, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	=====================================	=============================	==================
     13236	    37	  97.3	    29	....................................T	GAGCCCATTCTATAACAAGATTGTTATCG	
     13302	    37	 100.0	    29	.....................................	CTTCGTTAAAAATTCAGCTTTCGAGTGAG	
     13368	    37	  97.3	    29	....................................A	TAAAGTGGGGACTGCGGGAACCGGTGGAT	
     13434	    37	  97.3	    29	....................A................	ATGTGAGTCGCTTGTGTGAGCGTGTCGGA	
     13500	    37	  94.6	    29	....................A...............C	TGCCAGATTTCAGAGCGGATGAGCTGCCT	
     13566	    37	  67.6	     0	.........C.........AAA..ACAA..T.TC..C	|                            	
==========	======	======	======	=====================================	=============================	==================
         6	    37	  92.4	    29	GTTTTAGAGTCATGTTGTTTGGAATGGTACCAAAACG	                             	       

# Left flank :   GTATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAGGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTTGCAAGAAAATATCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAATTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGACTACGGAATCATGGAGAAAAAAATAATTCTCCGAG
# Right flank :  CTCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGATGAGCTGCTTCAATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGTTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAATCCAATTTGCGATGACAACAGTTTTCCACTTTTTCTTCGTACCGTTTTCAATAGGATTAGCACTTG

# Questionable array : NO	 Score: 5.43
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.51,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGTCATGTTGTTTGGAATGGTACCAAAACG
# Alternate repeat :   GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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