Array 1 1623281-1621711 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_011899.1 Halothermothrix orenii H 168, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	=====================================	======================================	==================
   1623280	    37	 100.0	    34	.....................................	ATTATTCTCAAGAGGATTTGGCAAAGATCATTGG    	
   1623209	    37	 100.0	    35	.....................................	ATGAATCGCCAAACATAACAGATGCTTCAACAGAA   	
   1623137	    37	 100.0	    34	.....................................	TTAAGCAAACCTGATAATTGGAAAGTTAATATTA    	
   1623066	    37	  97.3	    38	A....................................	CTCAAAAACATCACCCTTCTAAAATAATTGTGCTATGC	
   1622991	    37	 100.0	    36	.....................................	TATTTTTATATTTTCTTTTTCTTCTGCCGGTTTTAG  	
   1622918	    37	 100.0	    37	.....................................	GAGACTGGTTATCGAGATTGGAGGAGTTCTATGCTAA 	
   1622844	    37	 100.0	    35	.....................................	GTGTTGACTGATCCGCCTTATAATGCTAGTGTTAG   	
   1622772	    37	 100.0	    36	.....................................	TGATAGCTTTTTCCCCTAGTTTTACATTCTTTCCAG  	
   1622699	    37	 100.0	    36	.....................................	CCACGAATAGGCTCAACATAAGTACCTGCTTTCAGA  	
   1622626	    37	 100.0	    36	.....................................	ATGATAGGTTGATGACTATCAAACAAATCACAAATA  	
   1622553	    37	 100.0	    37	.....................................	TTTTTTGTAAGTGGGCCAAAACAATCACCCCTTATTG 	
   1622479	    37	 100.0	    35	.....................................	CAACCAGCTAGTTACGATTTGACTTTAGGTAATCA   	
   1622407	    37	 100.0	    36	.....................................	CAGTCCGGCGCCATCGCCAATTCGGCCACCACTCCA  	
   1622334	    37	 100.0	    34	.....................................	CCCTCAAATGGGAAGATTCAGAAGCTACCGAATG    	
   1622263	    37	 100.0	    37	.....................................	TCTGAAGATATAAGGTGGTTTTCAATAGTTAATCTAG 	
   1622189	    37	 100.0	    38	.....................................	AATGCCCAATAGTTAAATTGGGGTCATGAAAAAGGTTG	
   1622114	    37	 100.0	    35	.....................................	TAACTACCCTGATATCGAAAAACGGTATAAATCGG   	
   1622042	    37	 100.0	    37	.....................................	AGCGGGTCTTTTTTCCTGGTAAATTGTCCGGTAGGCG 	
   1621968	    37	 100.0	    36	.....................................	GATTAAAAGGGACTTTCTAAAGGATTTTCAGGTTGA  	
   1621895	    37	 100.0	    37	.....................................	CTTGAAATAAAGGAGATGTAAGTGTTGCAACATATAA 	
   1621821	    37	 100.0	    37	.....................................	ACAGGGGTATATATGGCAATAACCTATTTTGAGGAGG 	
   1621747	    37	 100.0	     0	.....................................	|                                     	
==========	======	======	======	=====================================	======================================	==================
        22	    37	  99.9	    36	GATTAATTGATACATCCAGCATAAGAAGGATTGAAAC	                                      	       

# Left flank :   AAAAGAACTATAACATATATAAAACTAGAATAGAAGGAGGTACTAAGGATGAAAAAGTAAAATTTTTAAAAAAAATAATTACTGGTAATATTTTAAGCTTTGCTAAAGGAGTAGGTTGGTGGATAGAAGAAAGTATTATTACAGTTCCCAAACTGAGAGAAATTCCTGTGAATTTTAAAAATCAAACGATGATAGGTTTTGTAGGTGAGTTTTATTCGAATGTATTTATTCCAGAATATATTGGTTTAGGGAAGTCTACCAGCAGAGGTTTTGGTACCTTGAGGCGTGAAAAAATAATCTAATTCTGAAGGAAAATTATTAGTGCATAAATATACGAACTTTGACAATTAAATATATATTAATAATTGAACTGATTAATTTTTTGCGGCATTTTGCTGATATTACTTTAATATGAATAATTATAACCATGATTATTGGAGAGTTATGTTCTAGAAAAATACCTTAGATTACTGTTATATAGGTAATTTTAAATTAAAACG
# Right flank :  TTACCTCATATTTGGCAAATTCCTTTATCTCTTTTTGACCTTCCCCCATTTGTCGGACACTGGGTTTAGGTATATAATTAACCCAGGAGGTGCCCCATAATGGGAAGGAAAAAATATTCAGAAGAATTTAAAAGAGAAGCTGTGGAACTTAGTTTTAGCTCGGATAAATCTTGCACAGTTATAGCAAAAGAACTAGGTATAAGTTATCATAATCTAATCAGATGGCGTAGGGAATACAAAAACAAAGGTGACTTAGCTTTCCCAGGCAATGGTAAACAAAAGTTAACCCCTGAACAGGAAGAAATTCAAAGACTAAAAAAAGAATTAAATGATATAAAAATAGAGCGTGATATATTAAAAAAAGCAGTGCGCATCTTCTCAAAGGAACCGAAATAATATATGGTTTCATCCGGGATCACAGTGATGAATTTACTGTGGAAAGGATGTGCCAGGTTTTAAATGTATCCCGGTCAGGATATTACAGCTGGTTAAGTAGAAAA

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GATTAATTGATACATCCAGCATAAGAAGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:67.57%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-3.00,-1.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [60.0-78.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.78,4.77   Confidence: HIGH] 

# Array family : NA
//