Array 1 296-1932 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXEW01000082.1 Flavobacterium psychrophilum isolate 25-SE117_S10_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 296 46 69.6 29 TAAT.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG 371 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 447 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 523 46 100.0 30 .............................................. AGCGATGGAAAATGCGCACGAGCTTACGCT 599 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 675 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 751 46 100.0 30 .............................................. ATTTAATGTAATTGTACCCGAACCAGCTCC 827 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 903 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 978 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 1054 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 1130 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 1206 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 1282 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 1357 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 1433 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 1509 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 1584 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 1660 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 1735 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 1811 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTTAGC 1887 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 22 46 98.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TTTTTCGACTTCCCGCTAGAAATTCGAAAAATAATCTATACTACAAATTTAATAGAAAAATGAAATGGAAAAATTAGAAAATACACTAAAAATAACATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAAAT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //