Array 1 39096-39595 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH379024.1 Fusobacterium sp. oral taxon 370 str. F0437 Scfld1321, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 39096 30 100.0 38 .............................. TGGGGTGGTCTTGCAGATGTTTTTGATGAAAATAAAAA 39164 30 100.0 37 .............................. TTTCTTGTGAGAAGCCTAGTTTATCAGCCCAAGACTT 39231 30 100.0 36 .............................. ATATGAATTTAATAGATGACTTAAAAGCAAAATCTC 39297 30 100.0 37 .............................. CAAGGCAAAACAAAAACTTTAAAATCATATCATTTAG 39364 30 100.0 37 .............................. TATGTGGAGGTAATCAACATTCACAGTTTGATAAAGA 39431 30 100.0 38 .............................. TTATAGATTTTTTTATATAAGTCAAAAAGTTCATTATT 39499 30 100.0 37 .............................. CTATTATTTCTACTGCCTCTACCAGTGTTATTCCAGC 39566 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 100.0 37 ATTTAAATTCTAATATAGAAATACATAAAT # Left flank : AATTCTAATATAGAAATACATAAATTTAAAAAGATTTAAAGTTGGAGCTTTATTTATGCAAGCATTTAAATTCTAATATAGAAATACATAAATTCCTAGACTTTTATGGAAATCTTATAAAAATAATTTATTTAAATTCTAATATAGAAATACATAAATTATTATAAATGTTATAATTAATTACAAATTTAAAGATTTAAATTCTAATATAGAAATACATAAATTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA # Right flank : TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTAAATTCTAATATAGAAATACATAAATTTTAAGACATAGTCACGCAAGTTATTTATTATCTAAATTTAAATTCTAATATAGAAATACATAAATTTGATTTTAATTTATAACCATCACACCAACTAACTTTATTTAAATTCTAATATAGAAATACATAAATGCCATTATGTGTTTGCATTAAGTCTATACGATTTATAATTTAAATTCTAATATAGAAATACATAAATGCTCGGCATATTGGTCAGGTGTTATGAACACAACTCTATTTAAATTCTAATATAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCTAATATAGAAATACATAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [3.3-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 40610-39810 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH379024.1 Fusobacterium sp. oral taxon 370 str. F0437 Scfld1321, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 40609 30 100.0 35 .............................. GGAGGGTCAAAGACTACTAACTTAAATGAGTTATC 40544 30 100.0 36 .............................. TTTTAATTGAAACTGGATTTTTAAAAGGCTTTTTCA 40478 30 100.0 37 .............................. TGTTATCTTGTTTATTATGTCTTAGATTCTTAACTAG 40411 30 100.0 12 .............................. TNNNNNNNNNNA Deletion [40370] 40369 30 100.0 35 .............................. GATGATGCTACAGATATCCAAATAGGTGAAAAGAT 40304 30 100.0 35 .............................. GTTAAAAATACATCATCACTACTAGGATATTTTAA 40239 30 100.0 37 .............................. AGAACATCATCTAAGTTCTCTCCAGTTTGTAACACTC 40172 30 100.0 36 .............................. CTATATTTTCCAAAAAATAGAGTATGGAATATTTCA 40106 30 100.0 37 .............................. AGAGTTGTGTTCATAACACCTGACCAATATGCCGAGC 40039 30 100.0 37 .............................. TATAAATCGTATAGACTTAATGCAAACACATAATGGC 39972 30 100.0 37 .............................. AAAGTTAGTTGGTGTGATGGTTATAAATTAAAATCAA 39905 30 100.0 36 .............................. TTAGATAATAAATAACTTGCGTGACTATGTCTTAAA 39839 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 100.0 34 ATTTATGTATTTCTATATTAGAATTTAAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGTATTTCTATATTAGAATTTAAATAATAAAATATAAAAATATTTTTAAAGGAGATGGGGTATTTATGTATTTCTATATTAGAATTTAAATACTGATAAAATTAAAAATAAAATTGCAATAAGTTTTTATTTATGTATTTCTATATTAGAATTTAAATAAGGTATTATTTGCTGATTCAGTTGCAACTTCTAAAATTTATGTATTTCTATATTAGAATTTAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATGTATTTCTATATTAGAATTTAAATAAGGTCTCTGACCTTTCTAACTTCATTATATCCTTTTT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTATGTATTTCTATATTAGAATTTAAATGCTGGAATAACACTGGTAGAGGCAGTAGAAATAATAGATTTATGTATTTCTATATTAGAATTTAAATAATAATGAACTTTTTGACTTATATAAAAAAATCTATAAATTTATGTATTTCTATATTAGAATTTAAATTCTTTATCAAACTGTGAATGTTGATTACCTCCACATAATTTATGTATTTCTATATTAGAATTTAAATCTAAATGATATGATTTTAAAGTTTTTGTTTTGCCTTGATTTATGTATTTCTATA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 41010-40846 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH379024.1 Fusobacterium sp. oral taxon 370 str. F0437 Scfld1321, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 41009 31 100.0 36 ............................... CTGATAAAATTAAAAATAAAATTGCAATAAGTTTTT 40942 31 100.0 35 ............................... AGGTATTATTTGCTGATTCAGTTGCAACTTCTAAA 40876 31 96.8 0 ..............................N | ========== ====== ====== ====== =============================== ==================================== ================== 3 31 98.9 36 ATTTATGTATTTCTATATTAGAATTTAAATA # Left flank : CTAACACAACTTTAAATTTATGTATTTCTATATTAGAATTTAAATTTCGATATGGTGGTACTTGATGAGTGGTCTAGCTTTAATTTATGTATTTCTATATTAGAATTTAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGTATTTCTATATTAGAATTTAAATAATAAAATATAAAAATATTTTTAAAGGAGATGGGGT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATGTATTTCTATATTAGAATTTAAATAAGGTCTCTGACCTTTCTAACTTCATTATATCCTTTTTATTTATGTATTTCTATATTAGAATTTAAATGGAGGGTCAAAGACTACTAACTTAAATGAGTTATCATTTATGTATTTCTATATTAGAATTTAAATTTTTAATTGAAACTGGATTTTTAAAAGGCTTTTTCAATTTATGTATTTCTATATTAGAATTTAAATTGTTATCTTGTTTATTATGTCTTAGATTCTTAACTAGATTTATGTATTTCTATATTAGAATTTAAATTNNNNNNNNNNAATTTATGTATTTCTATATTAGAAT # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.32%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 4 41398-42338 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH379024.1 Fusobacterium sp. oral taxon 370 str. F0437 Scfld1321, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 41398 30 100.0 37 .............................. TAAAGCTAGACCACTCATCAAGTACCACCATATCGAA 41465 30 100.0 35 .............................. TTAAAGTTGTGTTAGGAGGTGATTTTAATGACAAT 41530 30 100.0 38 .............................. GTACTAGATATTAAAGGTGAAAACTATCAGTTGACAAG 41598 30 100.0 37 .............................. CTTTTTTCCCATCTTTATTATATTCAATTTTATATAT 41665 30 100.0 12 .............................. AAANNNNNNNNN Deletion [41707] 41707 30 96.7 39 N............................. AAAAAATAGATTTTGTAACACTATACTTTGTATCTCCTA 41776 30 100.0 36 .............................. TTCTTTGCCATATATAACAAAATTGGAGTAGATAAA 41842 30 100.0 36 .............................. TGTAGAACATTTAGATATTTATGTTATTATTTATCA 41908 30 100.0 38 .............................. CACCCTTTTTTAAACTTTAAGATAATGTAATTCTTTTC 41976 30 100.0 37 .............................. AAATCTGGCGTCAATACTTGATTTTTATTAAAATATA 42043 30 100.0 37 .............................. ATCTATCTCTATCAGTTTTTTCAAAAACATCAGTATC 42110 30 100.0 35 .............................. TTATAATAAATTTCTTCTATTTCTAAAATAAACTC 42175 30 100.0 39 .............................. TCAAAAAGTAATAAGAAATGGAAGAGAAGCTATTAATGG 42244 30 100.0 37 .............................. ATAAACTAATTTCTTTCTACCATTACTATAATTTATT 42311 28 93.3 0 ............................-- | ========== ====== ====== ====== ============================== ======================================= ================== 15 30 99.3 35 ATTTAAATTCTAATATAGAAATACATAAAT # Left flank : AGCAAATAATACCTTATTTAAATTCTAATATAGAAATACATAAATAAAAACTTATTGCAATTTTATTTTTAATTTTATCAGTATTTAAATTCTAATATAGAAATACATAAATACCCCATCTCCTTTAAAAATATTTTTATATTTTATTATTTAAATTCTAATATAGAAATACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : | # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCTAATATAGAAATACATAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 366-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH378957.1 Fusobacterium sp. oral taxon 370 str. F0437 Scfld284, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 365 30 100.0 35 .............................. ACTGAGCTAACTCCCAAAGTGTAGGCACTCGTTAG 300 30 100.0 39 .............................. TATTACAGCAACAAGAGTTGTCATCATAGGTAATCCTTC 231 30 100.0 35 .............................. GCTGATTTAGTTATTTCATCTCTTAATACAGCATT 166 30 100.0 37 .............................. CTGAGAAATGTTAGAGATAATACACTTTTATTTATGC 99 30 100.0 36 .............................. ATTAAAAGAAGTGATAGTATCTTAACAAAGTATATG 33 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 100.0 37 ATTTATGTATTTCTATATTAGAATTTAAAT # Left flank : AATCTTTTCAAATGTGGTGGTGATAAAATGTATGTAGTTGTAGTGTATGATATTTCATTGGATGAAAAAGGTAGTCGGAATTGGAGAAAAATTTTTGGAATTTGTAAAAGATATCTTCACCATATTCAAAATTCTGTCTTTGAAGGAGAATTATCAGAAGTTGATATTCAAAGATTAAAATATGAAGTTTCAAAATATATTAGAGATGATTTAGATTCTTTTATAATTTTTAAATCAAGAAATGAAAGATGGATGGAAAAAGAAATGCTAGGTTTACAAGAAGATAAAACTGATAATTTCTTATAAAATTTATTGTCTACCTTTGATAATGTAAAATTACTGGAAGATTGACAAAAGGGATAAAAGTGTTTATTTATAAGCAAATTTAAGAAAATAAAAAATTGTAAGAAATTAAAGTTTTTTATTTTTTAGTAAAAAAACTTACATTGACAAAAAGATATAAAAAAAGTATTATATAGGAGTAGCTTTTTTAACTATCT # Right flank : TTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //