Array 1 4496-4263 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFKB01000069.1 Faecalibacterium sp. An192 An192_contig_69, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 4495 36 100.0 29 .................................... ATCTGGACATTATCGCTCCAAAGATAACG 4430 36 100.0 30 .................................... CTCCAGGCCCGCGCCGTATTTGGGGTTGGC 4364 36 100.0 30 .................................... CAAGGCGGCCATACATACTATATTATATAA 4298 36 91.7 0 ..............................C.GC.. | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 97.9 30 GTTTTGGTTCTCTGATGGATATTGATAAACTGATAC # Left flank : ATGCGGGTGCGCTATGCCATTGACCGATATGTACGCAGCCTGACCAGCGCCATCGAAAAGCAGGACGCCGGCCTGCTTCTTTTGCCGGAGCTGATCCGGGATGACCCCCTGTTTGAGGATGAACTGGATGGATGATCGATTTATGCGGCTGATGGTGTTGTTTGATTTGCCGGTGAATACCAAAAAGAGGCGCCGGGATTATGCGCAGTTCCGCAAGGCGCTGATTCAGGACGGTTTTCTGATGCTGCAATACTCGGTTTATGTCCGTCTGGCCCGGAACCACGACGACGCCCAGAAACATCTGCGGATTGTGGAGGATCATCTGCCGCCAGCCGGCTCTGTCCGGGCTATGTTAATTACCGAAAAGCAATATACCCAGATGAAGCTGCTGTGCGGCGAACAGATGAAGGACGAACATTTCCTTGACACCAAAGATCTTCTTGAGATATAATTTAGTAGAAACAATGCTGCCAAAACCGCAGGAACCACTATATCTTGCG # Right flank : GGGATTGAACTGTATGTCAGACCTGGAAAAGGCTTCCTTTGGCAGCTTTCAACCTGCCGGAGGAAGCCTTTTATTCCAGCTCTAACATCCCGAATCCACACAGGCTTCCCCGCAGATCCGGCCGTCACTTGTACTTTACAACCGTATACGGCACCACAATGCCGCCCTCATCTCCCACTGTGTTCAGCAGTTCCACCATACCAGGCAGGCGCTCTGCACAGAAGTCCTTCCGCAGAGGCACCGGGCTGATCCCCAGTTTCTCGAAATTCTTCAAGATGCCGGAGGTATCGTATCGTTTGGCTTCCAGCTTCTCCAGGGCTTTGTCCACAGACTGGACCGTCTTCAGAAGCTCGACCAGTTTGTACATGGCCTCTTTGTTTTTCCTTTTGTAATGGGATGCCCGAATCTTTTCCTGCAGGACCTCGGCCTGATAGTAGCTCACGTCCGGGAAGCATTTGCTGAACTTCTTGACAAGTTCCTCCCGGGTGCATTGGACCAGT # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGTTCTCTGATGGATATTGATAAACTGATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 1074-1529 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFKB01000114.1 Faecalibacterium sp. An192 An192_contig_114, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1074 29 100.0 32 ............................. TCGATGGTCTTGCCGTTGTTGGCGGGGATCGG 1135 29 93.1 32 .............A.......A....... TTGCAATACTGCAGAGTTTCACGCCCGCCCGG 1196 29 93.1 32 ...C........................T TTGACTACCTTTTGACTACTTTCTGCCTCAGG 1257 29 96.6 32 ............................A GAAAGCGGCGTCGAAATCCCCAAAGAGTTTGA 1318 29 93.1 32 ............C.T.............. GGCAACGGCAACAACTATCCCATCGGTATGAT 1379 29 86.2 32 ........T....A...A..........T AGCTACGGCGAGACCTACGACGAAGCAAAAGT 1440 29 96.6 32 .............A............... TTTGAAATGTGGTAGTAGTCGGTCGAGGTGAG 1501 29 86.2 0 .............A............TTA | ========== ====== ====== ====== ============================= ================================ ================== 8 29 93.1 32 CTTTTCCCCGCATGCGCGGGGGTGATCCC # Left flank : TTTATCTCCTGCTACTCAGTGAACAAAAGCCCGACCTGGAAAGTATTTCCGCTCAGTTTGGCCCGGTTTCCGGAACATCAAATTTTGAAACGCGCAATTATACCCAGCTTTTAGAACAGATCGAGCCGGGCAGTGTTTGGCAGTTTCGGCTGACGGCAAATCCCACAAAAAGTTGTTCGGGACATAGCCCCTCCGAAGGGCGAGGGAAAGTTTTGGCACACTGTACAACATCTTATCAACAGCAATGGCTTTTGGAGCGAGCAGAAAAGCATGGATTCCGCCTGTCTGAGTCTTCCTTTATTGTAACTAACTCCCATTGGATTCGTTTTTCAAAACACGGCGATCCCGGACATCCTGTTTCTTTGCTCTCTGTAACCTATGAGGGAGTTCTGCAAGTAACCCAGCCAGAGCTTTTTTGTGCCATGCTTACCCATGGCATTGGTCGAGGCAAAGCCTATGGCCTGGGATTAATGACTGTGATTCATCGGAGGTGACACAAC # Right flank : AAAACCGCCAATTTCTGAAAAAAGCAGGTACAGAAAAGACCGCACCGGTTGCCCGATGCGGCCTCATACCATCACTCAAAGGTGATGTGCAGCGTCTTGCCCATGCAGGACGCCATTTTTTGCAGAAACTCCAACGAAGGGTTGGCATTCCCGTTTTCAAAGCGTGAGATGTTTGCTTGCTTGGTGCCCATCTTTTCAGCCAACTGTTTCTGGGTCAGTCCAGCAGCCTTCCGGCTGGCGATCGCAGCACGAATCACTTCGTACTGCGGTGCCAGGCGGTCATACTCTTCCTTTACTTCCGGGTTTTCTGCAAATACCTCCTTTTTGTAATCGCTGTACCTCATAAATGCACTCCTTTTACAATCTTCTTTACTCCTAATTAACTTTGGTATGAGATACACTTTTATGAATTCCGACGCTTGAAATCATCCATTCGGTTTTGTGCGGTTTCAATTTCCTGTGGCGGTGTCTTTTGTGTCTTTTTTACAAAGCCATGCAGA # Questionable array : NO Score: 3.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCATGCGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 52183-53837 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFKB01000018.1 Faecalibacterium sp. An192 An192_contig_18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 52183 33 100.0 34 ................................. TTTTTGGCTTCCAGTTTCCAGACGCCGCCGTCGG 52250 33 100.0 34 ................................. CGCAACTGCATCGATATCCTGGCCATCCTGCTGG 52317 33 100.0 34 ................................. ATGTGTTCGTCGCCGATCATGGCCGCGGGGGTAA 52384 33 100.0 37 ................................. CTAGAGATGCCACACATCCAAGCCTTACTAAGGGCAG 52454 33 100.0 33 ................................. TGCTGGAAGTCCTCCACCACGGCGCCCCGCTGC 52520 33 100.0 34 ................................. TGATCCATGACAGCTTGGCTCTTGCCGTTGGCGA 52587 33 100.0 35 ................................. ACCGGCACAAGAAATACAAGGTCTTGCGGGCGGTC 52655 33 100.0 35 ................................. TCCTTTTGATTTTAGGCGGCCACAAAGGTGCCGGT 52723 33 100.0 34 ................................. TTGATGGCGGACGCCATGTCCGCATAGGTGGGGG 52790 33 100.0 34 ................................. ATCAGCCGCAGGCTGATGCCAGCGCCCCGCGCTC 52857 33 100.0 36 ................................. TTTTGCAGGCGCATACTGCTTACACGCATATCTGGA 52926 33 100.0 35 ................................. AAACGGGCCTGTGCTTCTTCGTACTGGATAAGCTC 52994 33 100.0 36 ................................. CTCTGTGGCCGGGGTCGGGTTTTCGCCTCTCAACCG 53063 33 97.0 34 ............G.................... CGCCCTGGAACGTCTATCAAGCTCCAGGGCCTGA 53130 33 97.0 33 ............G.................... CATTAGAACATGCCTCCCATAAACATGGTTTCC 53196 33 97.0 37 ............G.................... AGGTTGCCGCCGCGAATAGGCGCACGCAGGCCGGCCG 53266 33 97.0 35 ............G.................... GGGAGATTGGCACAAAAAAAGAGCCCGCTCTCGAA 53334 33 97.0 34 ............G.................... TGGATTTTGCGGACCTGATTTTGCATCCGCTCCA 53401 33 97.0 35 ............G.................... GGTGAAGGATTTCCGCAAGGGCTACGCCCGCAATC 53469 33 97.0 34 ............G.................... ATGGGGCCGCTGCTGAGCGCAGCGGAAAAGGCGG 53536 33 97.0 33 ............G.................... CCGGGTGTGCTGGGCGCTGCGGGCGCGGGCCGC 53602 33 97.0 34 ............G.................... CACTCGGCGGCCCGGGTGCGCTGCTTGAAGGCAG 53669 33 97.0 34 ............G.................... TGGCCCATCTGACTCTGCTCATGGCTGCCGAAGG 53736 33 90.9 36 ...A........G.A.................. TGGTTGATACCCTTGTTATTGATATTCAGACGGCGG 53805 33 93.9 0 ............G...................C | ========== ====== ====== ====== ================================= ===================================== ================== 25 33 98.2 35 GTCGCCCTCCTCACGGAGGGCGTGGATAGAAAT # Left flank : TTGTCACCTATGATGTGAACACCGAGACGGCCGCCGGCCGGCGCCGTCTGCGCAACGTGGCCAAAGCTTGTGTCAATTATGGTCAGCGGGTTCAAAACTCCGTTTTTGAATGTATGCTGGATGCGGCGCAATACGCTCTGTTCAAAGCCGAACTGGCTGCACTGATTGATCCGGAAACGGATAGTCTCCGTTTTTACTGTCTTGGCAATCACTATGCATCCAAGGTGGAGCAGATCGGACTTACGCCCCAATGGCCCCAGGACGGAATCCTTTTAGTGTAAAGGACGGGATTGCTTTCAGCCGCCTCTGTGCGAGCCGGAAGTCCGCAGAACTTTCACGCTTTCCTCGCACCGGATTCTGACTGTTCCTGGATGGTAAAAATATAAAATTGTCTCCTTCATTCATTGCAGGCTGCATAAAATACAGATGTCTTTTTTGTCAGCCTTATCTTTGTGAACAAATGTCAGCGGTTATATTCTCATTTGACCGTCACATTTGCT # Right flank : CACAAAGGCCTGCATCTGCGCCAGGCCATCTGCCGCCCGTGTCTAAAACATAACGCCAATGGGGATGGACGTCCAGGGCGGCAATGCCGTTCATTTCATCCTTGACATCCAGACACAGCGGTGTTACTCGGGCATCCATTCGGCAAAGTAGATCGCCATCTGTGCGTGGATCGTACTCCAGTCCTGCCGCCGTCCGGCCCTCTTTTTGGTAATGTCCATCATGGCCAGATGCAGCATTTTGAGCAGGCTGTCATCGGTGGGGAATACGGACTTGGTTACCTTGCACAGCTGGCGATTAAAGCCCTCAATGTTATTCATGGTAGATCAGCCGCCGGACCTCCTGGGAATACTTGAAGTAGGTACTCAGATTTGCCCAGTTGTCTCTTCAGGACTGGGAGATTTTCGGGTATTTCTTGTCTCAGCGCTCCCCAAAGACGTCGCGACCTGCTCATCCACAACGGCCTGGTGGATGATACAGTTCTGGATCTCGGTCTGAGAGA # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.82, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCTCACGGAGGGCGTGGATAGAAAT # Alternate repeat : GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.30,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //