Array 1 49582-51196 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGQN010000025.1 Klebsiella grimontii strain 4928STDY7071505, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 49582 29 100.0 32 ............................. TACATTGGGTGAATGCATAATAGAACGTCGTG 49643 29 96.6 32 ............T................ GACACCCCGGCAAGTCTGGGGACTGAGCGCCT 49704 29 100.0 32 ............................. GCTACGCTCGCACACATCACAACCGATATTGG 49765 29 100.0 32 ............................. TATTGTGCAATACACATAATTTAGCTGATCTT 49826 29 100.0 32 ............................. GCTGATTTATCAGTATCAACTCCTACAGATGC 49887 29 100.0 32 ............................. CGGTTGGTCAGCATACGAGCGATCACGCGAGC 49948 29 100.0 32 ............................. CGTCGGCGGTCAGTTGGGAAGTCAAATAAGCT 50009 29 100.0 32 ............................. TCTATGCTCAGATAATTGCAATCCAATTTTGG 50070 29 100.0 32 ............................. ACCTTATCGAGCAAGGAGGTACGCTCGCCAGT 50131 29 100.0 32 ............................. TTCATTGAGATACATTAAAGAGCATTAAGACC 50192 29 100.0 32 ............................. ATAACGTGGCCAAGAAAGCCGACGCCTCAGCA 50253 29 100.0 32 ............................. CATTTTTATCCCTTCATGGGGGGTATGAGTTA 50314 29 100.0 32 ............................. TATTTATTGTGGTTTGTGGTTAAATTTTAATC 50375 29 100.0 32 ............................. AACTGCGCCTTTAAACGGGCCGGTCCGTACCT 50436 29 100.0 32 ............................. GGGTTTTATTATCTGTAGTAATCTCTGTTGTA 50497 29 100.0 32 ............................. CGTGATCTGCGTGGGTATATCCGCGAAGCGGC 50558 29 100.0 32 ............................. TGATCAGCAAGTACGGCAAGCCAGCGCAATTG 50619 29 100.0 32 ............................. CTGCCGCTCCTGTCCGGGCCTATCGGGTGGAT 50680 29 100.0 32 ............................. GTGTAGCCTTCTGTCTCCAGTCGAGTCCGTAA 50741 29 100.0 32 ............................. CGGGCGCACGCTCGATACAGACAGCCATTTAA 50802 29 100.0 32 ............................. TCTTTCAGTCCTAGCTGTTTCCGATACGCATC 50863 29 100.0 32 ............................. TGTAACCCGCAATAAACCCACCGCATCACCCC 50924 29 100.0 32 ............................. CCATCCTTAAAAATGAACTGATACCAAAACAC 50985 29 100.0 32 ............................. CAAATGGCGATTGAGTCAAAGGGCGCGTCAAA 51046 29 100.0 32 ............................. GCAGATACCTCCTGCCCGATACTGTCAGTCTT 51107 29 100.0 32 ............................. CTGCTGTGCCTTGGTGTCGGAGCTCTGGATTA 51168 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.9 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTCAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GGTAATATTCTATTAAATTTAATCAGTTAGGTAGTGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 86127-85441 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGQN010000006.1 Klebsiella grimontii strain 4928STDY7071505, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 86126 29 100.0 32 ............................. GTGGTCAACGAGTGGCTAGGAGAAGAGGTGAT 86065 29 100.0 32 ............................. CTCTGGATAGTTAAAACACCCTGGGCGCGTCG 86004 29 100.0 32 ............................. CGAACGTAGGTTTCGTCCCAGGCGTAGCTGGG 85943 29 100.0 32 ............................. TACAACATGCTGGCGCAGCGGCATACCATCAG 85882 29 93.1 19 .........................TG.. CATAGCCTTGATCGCTTTC Deletion [85835] 85834 29 100.0 32 ............................. CGTAACGCAAATTCAGGCAGATTATTTAACCC 85773 28 96.6 32 ............-................ ATTGATCGCGCTTTCTCGCGCATCTCAGAAGA 85713 29 100.0 32 ............................. ATTGTTCAGGTCATCAATCAGCTGATCGTGGC 85652 29 100.0 32 ............................. ATTGTTCAGGTCATCAATCAGCTGATCGTGGC 85591 29 100.0 32 ............................. GACTTATAGCCATCGCCCATGTCGAATACCCA 85530 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 85469 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.6 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACCCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGCGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : CAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCCCCCTTATCCTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTAG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //