Array 1 192378-189361 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAEHO010000005.1 Klebsiella pneumoniae strain BS68-C NODE_5_length_262849_cov_208.748059, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 192377 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 192315 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 192253 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 192192 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 192131 29 100.0 32 ............................. CACCTCGCCTATAAATCGTACCAGCCTGACAG 192070 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 192009 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 191948 29 100.0 32 ............................. ATACGCAGTCATTAATCGCGGGTGTTACGCAA 191887 29 100.0 32 ............................. CCTGCTGTCATTTCCTTCGGCACTACCGGCGC 191826 29 100.0 32 ............................. TTACACAAGAGAAGCACTGACAACCATTCACA 191765 29 100.0 32 ............................. CCTAAATTGCCAATTTTCCTTGAGCGCTGGTA 191704 29 100.0 32 ............................. GTAACAGGTCAACTCTTTATCGCTAACGGCTC 191643 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACCATTTCG 191582 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 191521 29 100.0 32 ............................. CGCACGGTGCATTCACGCCCGCGCGCCTGTTT 191460 29 100.0 32 ............................. CATCGCTTTCCATCGCAGCTTTTTCCAGGCGC 191399 29 100.0 32 ............................. GTGACGCGCTGCAGTTTGCCAAAACCCTGCCA 191338 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 191277 29 100.0 32 ............................. TTTCCGGCAGCGTAGCCAACCCGGCCAACCGT 191216 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 191155 29 100.0 32 ............................. GGTTTATAGAGGCTGAGGTATTCACAATGCGC 191094 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 191033 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 190972 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 190911 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 190850 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 190789 29 100.0 32 ............................. TCGACGCCCCGGAGTGGGAAGACTTTGGCACC 190728 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 190667 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 190606 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 190545 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 190484 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 190423 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 190362 29 100.0 32 ............................. GGCCCAGTAATCCCCGCGAAGTCCTGAAGACG 190301 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 190240 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 190179 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 190118 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 190057 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 189996 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 189935 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 189874 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 189813 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 189752 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 189691 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 189630 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 189569 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 189508 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 189447 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 189389 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 50 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //