Array 1 333015-331036 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABLBO010000120.1 Hungatella hathewayi isolate MGYG-HGUT-01688, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 333014 30 100.0 34 .............................. TGTCCGGCAGCTCCCTGTTTGTCGCCATAATATC 332950 30 100.0 36 .............................. TCAATATCATATGCGTATAAAGAATCCGGTTATAGC 332884 30 100.0 35 .............................. ACTCTTTTAGAGTTAAAGACCAAGATGGACAAACT 332819 30 100.0 34 .............................. TAGGTCTGTCCTTCCTGATTGACACCGGTATACA 332755 30 100.0 34 .............................. GCTATCGGATTGATTAAGAAGACAGACATGCAGT 332691 30 100.0 36 .............................. CACGGAAGCCACCCTTCTAACCGCCATGGAGAATGC 332625 30 100.0 35 .............................. ACATAGCTGCACTCATACCCGCAGCTGATTTCCCT 332560 30 100.0 36 .............................. AATTTCCTGTTTCGGCCAGTTATTTTACCTTGAGAC 332494 30 100.0 36 .............................. GAATCTCCTTCTCCATCGGCATCCCCTCCCTTCTTC 332428 30 96.7 36 ..A........................... TTAAGGATATGACCGGTATAGGGGTACTGGTACCCG 332362 30 100.0 35 .............................. TGCACTATATGGTAAGTTGGTCCGGTGGAAAAGAT 332297 30 100.0 36 .............................. GGTACCGGATGATGATTTTGTTCTGACCCAGGTCCT 332231 30 100.0 36 .............................. ACGAACGGTATTGCAACGCTGTCGGTTATCTTTATC 332165 30 100.0 36 .............................. TCCATGGTAAAGTGCAGGTAAAGAAGTTTCTTAATT 332099 30 100.0 36 .............................. GCAATATTGCGTCTGGAATCAACCAGATTTCAGCAT 332033 30 100.0 35 .............................. GAAAGAGTGTTTGTTGTTGCAGGAGTAAATGAAAA 331968 30 100.0 34 .............................. TCCTTTCTGTTGCGATATCGCAATTTGAGTATAA 331904 30 100.0 35 .............................. TGTAATTTTTTCCCATGATATAAGATGGGTCATCA 331839 30 100.0 35 .............................. AACTACGCAAGATGGATGTGTGGAAACTTTGGAAC 331774 30 100.0 36 .............................. TCTTTGATAAGTTTTGTATTCCTTCGTCGAGGATGT 331708 30 100.0 35 .............................. CCAGTCTCCTCATCGGCGCCGGTCTCCGTCTGTTC 331643 30 100.0 34 .............................. CAACAGTCACTTGAGGAAACAGCGGTTTTCAAAG 331579 30 100.0 34 .............................. AACGGTGCAGCCTCTACCGAGCCATTTGACCATG 331515 30 100.0 34 .............................. TAATACCCCTCTTTATTTTTGTATTTCATATCCT 331451 30 100.0 35 .............................. GTATAATTGCCAACCACCAAGCCGTCCCCATTTTT 331386 30 100.0 35 .............................. TTGCATACAGAAAAATGGTTTCCAGGACCTTATGG 331321 30 100.0 36 .............................. GGAGGTAGCAAAATGAGAACAAAAAGCGAGATATTG 331255 30 100.0 34 .............................. CATTTGAGATGTATGCTGGACTTGGCAGCAATAA 331191 30 100.0 34 .............................. GATAAGGTTTTTGGAGGCATTGTGAAAGGAGCAA 331127 30 100.0 33 .............................. TAGATGCCGTATGGGTCTGCGTTGTCGACATGG 331064 29 96.7 0 .........................-.... | ========== ====== ====== ====== ============================== ==================================== ================== 31 30 99.8 35 GTTGAAGAAGAACAGTAGCTGTATTTAAAT # Left flank : TCCATTTTCTCTGAAGGAGGGAAAGTAGATGGGGAAATCAATGAATTATAATTATGCATTTGTGTTTTATGATGTGGGAGAAAAGCGGGTGCAGAAGGTGTTTAAAATTTGTAAAAAATATTTATCGCATTTTCAGTATTCAGTTTTTAGAGGTGAGATGACTCCATCAAAATTGATTTCTTTAAGGAGCGATTTGAAGAAAGTAATAGATACGAAGGAGGATTTTGTTTGCATTATAAAGTTGATGAATGATAATGTTTTTGGTGAAGAAATATTAGGAGAGGCAAATGGGTTGACTGGGGAAGAGCTTATTCTTTAATGGATTTTACCAGATGGGGAGTTGGAAAGAATTGGCGGAAGCAGCATGGATACTGGTTAAAATGAGAAGATTGGGAGATGATTTGGAAGGAGGGGGAGTGGCTGGTAAAAAAGTTGAAAAGTGTTGATTTTATATAAGGATATGGTATTATTGAGGAATGAAGAATGTAGTAAATGCGTGG # Right flank : AAGTATTTGTGAATGAAGATGACCTTGATAGGTTAAAAAAGTACTAGCATATTTAATTTCTCACAGTATATTATATTTTAGAGAGTTTTAACTGTATTGCTTAAAAGGTATCTCAAATCCTATAATAATTTGAGATACCTTTTATTCTTCTGTTATATCAGGTTCATATACTAGGATTTCTTCGATTCTGCAGTCAAGAATTTCACAAAGTTTGTTTAGGATGATTGTTTTTACGACTTCATTTTTTCTGAGGCGCTGGAGTTGGGCTTTATCGATGCCGTAATCTTTGATGAGTTTATATTGACTGATATTTCTTTTTTTCATGGTTTCCCAAAGGGGGTCATATTTTATCACGATATAAATTCTCCTTTATACTTGTATTTTATAGGTTGAAGCATTATAATAATATGGTGCGTGTACACACCATATTTAAGCGGATTTATATAAGAAAAAGAGAGGTATTTCATGGATAAGGTAAGAGTAGAGTCTAAAAATACAGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGAAGAACAGTAGCTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 343980-343231 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABLBO010000120.1 Hungatella hathewayi isolate MGYG-HGUT-01688, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 343979 28 100.0 38 ............................ TTAAGAAATCGACAGTAACATTAAAATAGTCGGCTAGG 343913 28 96.4 38 .............A.............. GGAGGTTGTATACCGCAATACAGGTGAGCGCCTTCCGG 343847 28 100.0 39 ............................ GATATTGATTGATGATTACAAAGCGAAACAACTTGCAGT 343780 28 96.4 36 .................A.......... GAAATGCTAAAAGCACCACCAGAACAATCAATCCGT 343716 28 100.0 37 ............................ GCTGGTAAGGTGCAGATTGAGTATCACTCTGATGGGT 343651 28 100.0 37 ............................ TCTGCTGTGGAGATGCCTGGGAAATAGGTTGTATGGT 343586 28 96.4 37 ..........T................. ACAACATGGACCCGGACAGTCCCATGGGCGTCGCGGT 343521 28 100.0 39 ............................ TTCATGGCCCGTAGATGCCCGTTGACAGTGGATGTACGT 343454 28 96.4 38 .............A.............. TATAGGCCCTGGAGGAGACAGGGCGGCCATCCGGAGGG 343388 28 96.4 37 .............A.............. TAAATTTTTGCAAGATATACAAGGGCATGGACATTAG 343323 28 100.0 38 ............................ CCTTTGGAATTGGTTATTGTTTCGGTGACCATTCTAGT 343257 27 75.0 0 ....A.....T.A..T-..A...G.... | ========== ====== ====== ====== ============================ ======================================= ================== 12 28 96.4 38 TGAAGAAGAACAGTAGCTGTATTTAAAT # Left flank : CACAGACGGTTGGGTATTTGGCTGGAATCGAAGGATATCCAGAGTCAGAAATACCGGAAGTACTGCCGGTGATTGAGGAGGAGATGCTGGTTATGAGAGGTTTTACCAGCAGGAGGATGGATGAACTGCTGATGAATCTGAGAAAAGCCGGGGTGCCGAAGATTGCGCTGAAGGCTGTGGTGACGGAGAGTAATTGCGGGTGGTCGTTTTATCATTTGTATGAAGAGATTAGGGAAGAGCATAAGAAGATGAGTTTATGATATGGGGATAAAAGTGGAGAATTGCTTTAACAGATACTCTTCATGGGAAATATTTAAATATAAATTTACCAGGCAGAAAAGTCTGGTAAAAGCTGAAAGACTGCATAAATGCTAGTTTCTGAAGGGAATTAGAAGAGATATAATAAAGTGCGGGGACAGCTTGGTAAAAAATTGAGTATATGTTGATATTACTGGGGGATATGGTATTATAAAGGGAAAAAATGCTTTAGATATGTTGGG # Right flank : AAATCACAGGTCTAGAGTATAATATAAATAGTGGACGAGGTGGTTTTGCCTTATTTAGGGAGGTTGGCTATGATTGAGAAATTGATTGCAGAAGCAACTGAGTGTGATTTCAAGGTTGCTCTTGAAACTAGAAGGCCTAAAAGCTGGTTGAAAAGTGTCAGCGCTTTTGCTAATGGTATTGGTGGAACCTTATTTTTTGGTATTGATAATGAGGGTAAAATTACAGGGATTGAGGATATTCAGTCTGACGCAGAAGCGATTAGTCGTTTTATTAAGGAACGTATAACGCCATTGCCTCAATTTGTTCTTACTCCTGTCAGGGAGGGTGATAAAGATATATTGTTGCTGTCAATTGCTGCCGGCCGAACAACGCCATATTATTATAAGGCGGATGGCATAATGGAAGCATATATTCGTGTTGGAAATGAAAGTGTGGTGGCACCGGATTATGTTGTTAATGAATTAATTTTAAAGGGGTCTAATCGCTCCTTTGATACATT # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGAAGAAGAACAGTAGCTGTATTTAAAT # Alternate repeat : TGAAGAAGAACAGAAGCTGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //