Array 1 28237-29958 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCQG01000028.1 Geobacillus jurassicus NBRC 107829, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================= ================== 28237 30 100.0 35 .............................. ACAAGCGGCACGGCGTCCGGCGCTGTATCTTTCCC 28302 30 100.0 37 .............................. AAAATTGCAGATGCTACGATTACAGATGCTAAAATTG 28369 30 100.0 37 .............................. TTGGTCTTGGCAAAATTCTCGGCTTTTCTTGGGAAGA 28436 30 100.0 36 .............................. GTAAACGTGTCAGTTCAGGTGTTTGTTTGTAAAGGG 28502 30 100.0 34 .............................. TTCGATAATTAAAGGAGATAGTGGCAAATGATTC 28566 30 100.0 36 .............................. TAAAATGCCTTCTCAAGAATACGATAAAATGTCGAC 28632 30 100.0 36 .............................. TTTCCAACAATTACCAAGTTCCTTGTATGACTTTCC 28698 30 100.0 36 .............................. CTGGACAATTGCTACCGTTTCATTGCTTGTGAAGTC 28764 30 100.0 38 .............................. GTGTTTGATTCGGATTGGAGCCAATAGGGCTTCGACAT 28832 30 100.0 36 .............................. GCGGGTAAATCGTCACGTTTTGCACAAATGGGGGGA 28898 30 100.0 35 .............................. TGATCATGGCGGCGGCCGGTGCTATATCACTGTTG 28963 30 100.0 36 .............................. GTTGAAGATGTTACGGATTTACAAGCAGATGCAAAA 29029 30 100.0 37 .............................. ACAAAGCGAAAGATATCGCTCTCGATTTTTGGTCTTA 29096 30 100.0 37 .............................. ATCGATTTCGCTTCCGATATATTCCCAATCCACGCCC 29163 30 100.0 35 .............................. TTCGATTTCAATACTAAAAATCCAGCGGCGCGGCC 29228 30 100.0 35 .............................. ATCCTTGATATTTGAAGCCTTTGATTTCAAAGCTT 29293 30 100.0 34 .............................. CTGTCAGCCCGTCAAAGGCGATGTTTCGGAACAA 29357 30 100.0 35 .............................. TTTGATGTATGAAACTTATTGAAAAATGAGGCGAA 29422 30 100.0 34 .............................. CTGTCAGCCCGTCAAAGGCGATGTTTCGGAACAA 29486 30 100.0 36 .............................. TTTTAAAAAGCCGTATACTACTCCTCCTACTGTTTT 29552 30 100.0 36 .............................. AATGTCATCGTTTCTGGTTCGAGACCTTCAGCTAAC 29618 30 100.0 37 .............................. TTTTTGGCATTGGATTGGGAATATATCGGAAGCGAAG 29685 30 100.0 35 .............................. GATCTTCGAGTGGTCTGTAACCAACTGGCAATATA 29750 30 96.7 38 ..........................G... CCAAGCGTACGTCGACGCGGCGCTGACGATCCTAGTCC 29818 30 100.0 77 .............................. ACAAAAGGAGTAGACTACACAGCGTCATTCAATAACCAGTTTTTATCGTACCTATGTGTTAAAGTTGTCCGAGACGA 29925 30 93.3 0 .......................A...C.. | T,TA,T [29946,29948,29955] ========== ====== ====== ====== ============================== ============================================================================= ================== 26 30 99.6 38 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CAAACAGCCGATCATGGTCGCCCTGCAAAACTTATCCGGCAGCCAAATCGTGCAATGGAACGTGCAAATGGCAGGCGCCTTGCTCGCTGCGCTGCCGACATTGCTCGTATACATCTTCCTCGGCAAATATTTTGTCCGCGGCTTGCTTGCCGGTTCGGTGAAGGGGTAATGAAAGCGAGAAGGTTGAAGTGAAAAAGGAATTTTTGCGCATGCTCGTCCGCCTCGAACTTGCCGAAGCGAGGCAGCGTCTGTTGGTTGGAAGCGTGGAAAGAGTGGGATTGGACGAATCATTTCCACAGCGCGTAAGACAAGCCAAGCTTCCCTTGCCTATTGTCGTCGACCCCCAATCGTGCAAAAAACCTAGGGGATCGACGACAATCTTTTTATGCGCCTAAAGCTTACAGACATCACGGACGAACAGTATTGACAGAATTTTTAAAACGTTGTATTCTGAAGATGCCCCTAAAGGGAAAGCTTGATATTGCGCGCATTGTTTGGGG # Right flank : CCTTTTATTTCAGCACAAAACGGTCATTTTTTTTTTTTTTGCACATTTTTTCAGAACGTCTTCTCTTTCTGAAAGAATGTGCTATGTTTTTTGTGTGCGTTTTCGGATAAGCCGCTCCATTCACTGAAGAGAGATGTGACGCTATGTTTTAGCATCAACATCCAAAGCGGGAAAGCGAATGATGGCCGTTCAGCGAAAACGCGTCTTTCTTCTCACCTGCGTGTGTATGGGATGGAGGGCGCTTGGCATTGCCGTCGGGCTGTTGGGTTCTTTTCTCCGAAAACGTGGTAAGATAACATAAAACATACTATTAATATTTATTTTCTATGAATTAGAGGCGGATGAAAGGGGAGAGAGCCATTGATTCGATTCCAGTATATTGAGAGCGGAGAAGAACGTTTGGCGGTTTCAATTCATGATCCAGCGGTGTCGGCTGATCGTGGGGATGCGCCGGTGGTGGTCATTTGTCACGGGTTTATCGGCACGAGAATCGGCCATTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 7123-3764 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCQG01000072.1 Geobacillus jurassicus NBRC 107829, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 7122 30 100.0 36 .............................. TTCTACAAAGCGAAAACCCGGCGTACAAGCCTATCA 7056 30 100.0 40 .............................. ATTCGTTAATTTTAGCGAACAGATCCTCTTTCGGGATCGG 6986 30 100.0 37 .............................. TTGCCGGTGTTCTCAAAGCATTTCCTGAGGTTAGTTT 6919 30 100.0 34 .............................. GCTGTTGTTAAGAAGGAAGCTGACGAAGCAAAAC 6855 30 100.0 37 .............................. ACCGCCGTCTTTTTTGGCGCCGGACACTCCGCCTGGA 6788 30 100.0 36 .............................. CGGGATACAGAACTCACTCGTTCCGGGAACGAAAAA 6722 30 100.0 36 .............................. CGTGATCGCTGCCGACTACGTATTTCCACCATTGAC 6656 30 100.0 38 .............................. CTGTGACAGTGAAGGAGGTTCCTGTCAAGCCGCTGAAC 6588 30 100.0 36 .............................. TGCTATCCGTGCGGAAACCCATTCGCACGGTCAAGT 6522 30 100.0 35 .............................. AATCATAAATTGTTTCTATGTCGTTTGCGCTTTTC 6457 30 100.0 37 .............................. CATCACATAACTTAACATATTGTGCATATCCATGAAC 6390 30 100.0 36 .............................. TCGACCGCTCCGCTTGAAATCTTTGGATTCGTGATT 6324 30 100.0 35 .............................. TATCGTTGAAGACGGGGATCGTGCTTGGATCGAGT 6259 30 100.0 38 .............................. ATCGGCTGAATGTTAGCCGCACCGAACAGGTTAGCCGC 6191 30 100.0 36 .............................. AAATTAAGGCCCAATCCGTACATGACAAGCAGCGTT 6125 30 100.0 37 .............................. ATCGAAGCGCAAAAACGAAGTGTACGTGCTGGATTGC 6058 30 100.0 37 .............................. CACAATTTCCTCAATCAAGTCATTCAAAAACTCGAAA 5991 30 100.0 36 .............................. AGCAGATTGCGACAAGCCAAAAAGACTTGGTGGATA 5925 30 100.0 36 .............................. ACTTTTGCTTCTGCTAACTTATTTGAAAATACAGAT 5859 30 100.0 35 .............................. ATTGTTCCATCGTTTCTCTCCTCCTCTGCTTGTCC 5794 30 100.0 38 .............................. ACGGAAAGTCTAGCGGCGCTGTTTCGTGGCTCGACGAT 5726 30 100.0 36 .............................. CAATTCGAAATTTACGCGCCGTTAATGGTTGCCCGT 5660 30 100.0 37 .............................. TTAAGAGAAGCGGCTGAAAAAGCTAGACGTACCGGTC 5593 30 100.0 35 .............................. ACGGAATCCCAAACGAACCGAATCAACCATAATAC 5528 30 100.0 37 .............................. CCAAGTACGAAAAGCCGAATGGTAACGTTTGTATTTC 5461 30 100.0 35 .............................. ATCGCCTTGTTAATCGCGAATCGCTTCGTCTTGCC 5396 30 100.0 36 .............................. TCCCGAAAACAGCGCTCGCTATTATCGGCGACGCGA 5330 30 100.0 38 .............................. GTTCCGCCGCGATCAAGCGCTTTTACAACACCGTCAAG 5262 30 100.0 38 .............................. CAAATAGTAGTAAAAGCAATACGAAGCGGGAAAGAGAA 5194 30 100.0 38 .............................. CGCTTAAGTCCGTATTGTTCTGCGATTCCTTTCGCAAT 5126 30 100.0 36 .............................. CGAACAAGCGTATAAAGCAATTTCTGACGCTCTTGC 5060 30 100.0 36 .............................. TTCCGGATAATGAAACTGATATTCTTGACGAGTTCC 4994 30 100.0 35 .............................. ATATCATCCTGCTGGAGAAAGTCGTAGGTTTGAGC 4929 30 100.0 36 .............................. TCTATTGAATTTACGGCGTACATTGCACTTGCTGTC 4863 30 100.0 37 .............................. AACATAGTGGCGAGGAACATATTACAAACGTAGAAAA 4796 30 100.0 34 .............................. CCCCTTGCCCTGCACTTTCTGCGCCTCCTAGAGC 4732 30 100.0 36 .............................. ACGTGAAATGGGAAGAACCGCGCGTGATCGGCGAGT 4666 30 100.0 36 .............................. CTCGCCAAGATGTAGCAGAATTTGAGCGTGTTATGC 4600 30 100.0 37 .............................. CATGGTGTCGAGAAGTTGAAGTTGACGCAAGTTGCGC 4533 30 100.0 35 .............................. TAGAAGCGGCATAACACCCGACATGCGGATCAAAT 4468 30 100.0 37 .............................. ACGGGATGTTATCAAATTGCACGCCTTTCACGCGAAT 4401 30 100.0 38 .............................. CATTCACGCGACAAAAGGAAGTCAGACGCCGATCATTC 4333 30 100.0 35 .............................. CACTGCAAAAGACCGTGACACGTTCGTGCTGGGTA 4268 30 100.0 39 .............................. ATCGATCATCTCAACAATATCCAAAAATACTTCCATACG 4199 30 100.0 35 .............................. TCGACGGGCCGGCTCGAAACCGACCCTGCGCGTGC 4134 30 100.0 36 .............................. AAAATAATTATAAAAGCAACACGAAACGGCAAGGAA 4068 30 100.0 44 .............................. TCTATCGCCTTGACCGCCTCACTCGTTCTGTTCTCGACTTGTAC 3994 30 100.0 40 .............................. GCTTTTCTGCCGCGCAGTCGCTGTCGTTTTGGTTCGGCCG 3924 30 100.0 35 .............................. ATTTTCAATGCTCGTTGAATCCTCTCCACATCTTT 3859 30 100.0 36 .............................. TCTCACCGACCTCCAAAACACAAGGGGGGTAATCAC 3793 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================ ================== 51 30 100.0 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : ACGTATTTGCGGTTGTCCGAAGAGGAGGAAACGAAACTGCGAAACGAGGTGAGCCAAATGGAGACGAAGGAAGCGAAACAAGTGATGGAGCTCATCATCTCATACGAACAGCGGGGAATGGAAAAGGGGATCCAACAAGGAGTCAAACAAGGGATCGAACAAGGAATCAAGCAGGGGCGTCAACAAGGGATTGAGGAAGGGAAGCTCGACGTTGTGAAGAGAATGCTGGCGAAAGGGTACGATGTCGAAACGATTCACGAACTGACCGGGCTGCCGGTTGAGAAGATTGAAAAGGTGAAGGGGTAAACCGCCTCTTCAACCTGACTTCCTATTGTCGTCGACCCCCAATCGTGCCAAAACCCCGGGGGATCGACGACAATTATTTGATGCGCTTGAACCTTACAGCCATCGAGGAAAAAAGGAATTGACAGAATTTTTGGGACGTGATATTCTAAAAACAGCCCCAGCTCAGAAAGCTTGATATAACAAGCTTTTTTGGG # Right flank : CTTTGTGTTTGGTGCGAACCATCGTCGCAATAAACGCTTTTATCATCTCGCACCGATTTATCCCCCACTTCCACGCGTGAGCGTAAGTGGGGGATGAATCGGTGTCTTTCCTCATCGATCTTCCTCTTGCATCAAAAGAACAAAAGTATAAGATAAATAAAAAAACATACGTTCCCTAAATTAGGAGGGAAGGCCATGCACAAAGCCTGCCGATTTCGGCTGTATCCCACCCGAAATCAAGCGGAGCTCATCCACCAAACGATCGGGTGTTGCCGGTTTGTGTACAATCACTTTTTGTCCGAATGGAATCAGGCGTATGAAACAACAGGGGTGGGGCTTAGCGATAACGGGTGCTCCAAGCGGTTGACCGCATTGAAGCAAACGCTCCCGTGGCTGCGGACGCTCGATTGGACCGCCTTGCAAAGCGCGCTGCAGCAGCTGGCCGAGGCGTTTGACCGGTTCTTCGATGGAACGGCGACTCCTCCCCGCTTCAAAAGCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 68043-66893 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCQG01000002.1 Geobacillus jurassicus NBRC 107829, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 68042 30 100.0 37 .............................. ATCTCCCTTTCTTATCACTTTTTCCGCGTCCACATCG 67975 30 100.0 36 .............................. CAAGGAACAGAAAAACAAGTTGCTTGGGCTCTGAAG 67909 30 100.0 36 .............................. TATTCACGAAAAAACGCGTTATTCCGACGCTCATCC 67843 30 100.0 36 .............................. ACCGACACGATGATTAATGACGCAATGCAAAAAATC 67777 30 100.0 36 .............................. AGAAGCACTGACAGGGGATATATGGGCAATTCAGTG 67711 30 100.0 36 .............................. ACGTGTTAACATCGCTTTCTCTATATCGAGTTCGGG 67645 30 100.0 37 .............................. CAGACTCATGGATATACGTGTATCCATGGTCGTTTTC 67578 30 100.0 35 .............................. ACGATCCCGGAAGTGGTCGTCAACCGCATCATGGA 67513 30 100.0 36 .............................. ATGTCTGCCCGTAGGATGACGTTGACATTAAATTTA 67447 30 100.0 35 .............................. GACATTTTCGTCCACCTCCATCATTTTCCATGACC 67382 30 100.0 35 .............................. AAACATCTATTTTCATTCGCCAATTCCCCAATCTC 67317 30 100.0 39 .............................. TTTTCCAACTCTTCCCGCTCTTGTCCAAGAGCGAAGCGA 67248 30 100.0 35 .............................. CTTGAACAACAACCAAATCGGGCAAGCGGAATTTT 67183 30 100.0 35 .............................. AATCAAACGCCGCATCGTATCGTATTTGAATACTT 67118 30 100.0 36 .............................. GATACACCGATCACAGAAGTCAAGGAAATCTATGAG 67052 30 100.0 35 .............................. CTATCATCGCCCAGAAATTCGAGCGATGGCATTGG 66987 30 100.0 35 .............................. GCGTTCATAATTCCAGCAACAAGGTCAGCTTGCAA 66922 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 18 30 100.0 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GAATTAACAAAAGAGGCAACTAAGTTAGCTGATGAGTATGAGCGTATTATGACAGCGAAAAATATGCCTATTTACGAAAAAAAGGCGGTTCTCCGCCGTATAACAACAGCGATGGGCCAATATATGGTTCAAATAAGGGTTAACCGATTGATGAACAGTCAGCTAGCGGAGTTTGTTACTCGTGGAGGTGTCAAGGGGAATTTCTTTTGGGTGCCGCCCAATGAAGTGGATAAATTTTACGACATGCAGACTGGTTTCAAAGACGAAAGTGGAGCGGCGTATTTGTATTAAGGGATGAATAGGTAGAGGGTGACGATTTAAAGTTGTGTTACTGTCGTCGACCTCCAATCGTGCAAAAAACCCGGGGGATCGACGACAATGTTCTTTTGCGTCAAAATCCTACAACCATCACGGCCGAACCGTATTGACAGAATTTTTGAAACGTTATATTCTGGAAACAGCCCAGAGGGAAAAAGCTTGATTTGATGCGCATGGTTTGG # Right flank : TACGGTCCAAGATCCGCGGCTGTGAGTCGTTTGCATGTGTTCCTCGTACCTGCCGACAGGCTAGTTATCTTTTTTTTCCGCTTTTGTTGTCTTTGTTTGAGATGTGAGGGCCTGCCCGTCCCCTCCCATTGAAATCCTCGCCACGGGTCAAGGTGTTTCTTCTCCTGCTTTCTGCTCCCCTCTCGCAGCTGCCTTGTTCGATGCGGTATACTTGATAGAAGGAGCAACGTTGGTTTGCTTCCGGATGGACGTTTGTGGCAAGCAAAGGGAAGAAAGGGGAATGGGGATGCGCTGCAAGCTTCGCGATCTCGGGTTTTCCATCGGTACGCTTCCGGTGGGGAGGCGGAATCAAATCACGGATGTGTCAGGGGTTCGGGTTGGGCATGTGACGATTCGGGAAGATATGGATGAGCGAACGGCGATCCGCACCGGAGTGACGGCGGTGCTGCCGCACGGGGGCAACTGGTTTTTGGAGAAAGTGCCTGCCGCTTGTTTTGTGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 75960-75544 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCQG01000002.1 Geobacillus jurassicus NBRC 107829, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================================================================================================================================================== ================== 75959 30 50.0 222 TG.C.GGGTTGCCAGT.............A AGATGAAGGAATAAGCTGGGGAAGTATGGACAGGCCACCCGAGTCTAACCCGTACGTTGTCGTCGACCCTCAATCGCGCAAAAATCCCGGGGGATCGACGACAATTGTTTTTTACGCCAAATCCCTACAGCCATTACGGACAAAAATTGACGGAATTTTTAAAATATGATATTCTGAAGATAGCCCGAAAAGAAAAAGCTTGATATTATGCGCGGTTTTGGG C [75938] 75706 30 100.0 36 .............................. ATTCTAACAGTGTCGATGTGTGGCAGGATTTAGATT 75640 30 100.0 37 .............................. CCGACAGGAATGGGGAAAACGCTGGCAGGCCTTCACG 75573 30 66.7 0 T.T..ATCGTA.C............A.... | ========== ====== ====== ====== ============================== ============================================================================================================================================================================================================================== ================== 4 30 79.2 99 GTATTTATCGTATCTATGAGGGATTGAAAC # Left flank : TATACTTTTTGGCAATGCTTAAAGCAAGGTGAAGAATGCAGAACAAGTTTTTATCGTACCTATGAGGGATTGAAACAGTGGCAATGGGAAGATAATTCCTATTCGGATGACGAATCGTCAAGATTGTTCTAAAGTGCAGTGCTATGAGTCAGAGCCATTTTATATAGATGCAATTTGAAGCTTTAACATTTGTAGCTTTTACCGAGCATTTGATCGACTGTCGAAGGCAAGCCTGTGGCTTGCCTTCGACAGTCGAAAAATGGACAAGCCACTTTTCCGTCAAGGATATGTTAAACTTTTTCGTTGCATTTATCCTGAAAATACTTAAATTCCAAAATGTATAAAATTAAAATGTTCGACAGAAGGGTATTTTCATCCTTCCGATGGCGCCGAAATTTTTTCGGCATGGGGGTCTATATAGGATATCGTGCACGAAGGAAAAATAGACATCGCGAAGAGAATGTTGGCCAAGGGGCATGATGTGAAGATCTTTCACGAAC # Right flank : CGTTTTTAGGATAGTGGCAGCGAAAAAGGAGATTTTGCGTCATATCTTTCCATCACATCCCTGAAAATGAAATAAGGTATGAATAGTTTGAAGTGCACATATATAATCGTATACATAAACCTGCAAATGTCGGAGGAGGAAACATGCACATCACAATTACGTTGCAAAGTGACACTCCTTGGGAGATTCCAGTCAATTACAACCATTTCCTGCAAGCGGCGATTTATCGCCACCTTAGTCCGGAATTCGCTGAGTTTCTTCACAATCAAGGGTATATCGTAGATCGTCGACGGTTTGCCCTCTTCTCGTTCTCGCGTTTAATAGGCCCTCATGATTATGTCTCTGCATCCAAAATGTTAGTCTTTCAAAACACGGCCAAACTCATGCTGTCCTCACCGATTGAGCAGTTTATACGGGAAATCACCCAAGTTTTGCTCATGGAAGGAATACGCATCGGAAGCCAGTTTTTGCGTGTCACATCCATCCAAACCGAGATTTTT # Questionable array : NO Score: 4.81 # Score Detail : 1:0, 2:3, 3:3, 4:-0.04, 5:0, 6:0.25, 7:-3, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTTATCGTATCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTGTAGGGTACCTATGAGGGATCGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 81218-82371 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCQG01000002.1 Geobacillus jurassicus NBRC 107829, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 81218 36 100.0 29 .................................... AGCTGTTGTGTACATAGCTTTTTTAATTT 81283 36 100.0 30 .................................... CTTCACCTCGTACTCGACAAGACCACGTAT 81349 36 100.0 29 .................................... CCGATTAACCCCCTTTTCAAACCGCCACC 81414 36 100.0 30 .................................... CTTCGCAAGGCTAACACTGAACTAATCGTC 81480 36 100.0 30 .................................... CTCCTATGTTATTTCCTTTTTCTGATTATA 81546 36 100.0 30 .................................... ACCATGTCTGCCTCAAGTTTCGCGACACGC 81612 36 100.0 29 .................................... GCATCCATTTAAATCCCTCTCCGTTCAGA 81677 36 100.0 29 .................................... CTGTCCCACGGAGGACAAGTCAGTACTCC 81742 36 100.0 30 .................................... AATGGCTCACAGTGTCTTTATATTGCTTAT 81808 36 100.0 30 .................................... AATACAAACGCTTCATTGTCGCGCATTTTT 81874 36 100.0 30 .................................... TTGAGGAACCGCGAGTCATTGGTGAGTGCG 81940 36 100.0 30 .................................... ACCGCTTGTATTCCTCAGACATGCACACCT 82006 36 100.0 30 .................................... AGATATGTATGATTTTAATACAAATGAATT 82072 36 100.0 30 .................................... AGATATGTATGATTTTAATACAAATGAATT 82138 36 100.0 30 .................................... CTGATCCAAGGAAACCTGTTCTTAGACTTG 82204 36 100.0 30 .................................... CGACGCCATTCCGTCCACGCCATGACCGCC 82270 36 100.0 30 .................................... TTTAAATTTTACAACGATTGCTCCGATCAA 82336 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 100.0 30 ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Left flank : GCTTCGTCACCGCAAGCCGAAGCCAAGACCCTTCGTTGTTGAAATTGCCGGAACTTCTCCCATTGCAACTGCACGTGTATGAGTAAGTTTATGCGATTGCTCGTCTTTTTTGACCTTCCCGTCGTGACCAATCGGGAGAAGCGCGAATACCGGCGATTTCGCACATTCCTGCTAAACGAAGGGTACGATATGTTGCAGTTTTCGGTCTACAGCCGCGTCTGCCATGGACACGAAGCAACGGACAAACACCTAGCAAGGTTAAAACGCAACTTACCCCCTCGAGGATCGATTCGGGCAATGGTCGTAACGGAAAAGCAGTACGCAAAAATGCAGCTGCTTCTTGGGGAGCCGACAGCACAAGAAAAGAAAATCACATCCACCCAGCTGACGCTTTTTTAAAAAAAACGGGAATGGTTCCCCTTTTTTGCATAAGCACATTTGCATTTTTTGAAAGCAAAAAAGCCTGCGATCCTTGAGATAGCAGGCTTTTTTGGATACGT # Right flank : CGCTTCTTCCATTATCCCCATCCTGCTAAGGAAAGGACTTGTTCGCCCCGTCCTTCTCTATATCCCCCTCCAACCTCCCGATAATCGCCTCTTGATACCCCGCCTTTTTGCGCCGCTTCATCTCTTCTTTCACCGGAAGCAAGTCCTCTGCCGAGATCGATGCGAGTTTGGCGAGCCGCTCAGGTGGAAGTTCGATCGCTGGGTTGGCCGCCACGTAATCGTCCAAGGAAAAGCGCCAGAGTGCGACGGCCGAGCCGTACCGTTCAAGCAATCGTTCGGCCATGGCCAATCCTTCCGGGTCAAAATCGCCGGAGTAAAGCAGGCGCGCGCCAGAGGCAGCGAGCAAATCCAGCAGTTTCATCGTCGCCAAGTTCATTTGCCCGTTTGTGCTCACAAGCGGGGCGCGGGTGTCAAGCAACGTGGAGAAAACACCAGCGTTTTCCACAATGTACACCGTCCCGCCGCGGGCAGGATAGGCGCGCGCAAGCGGCAGCACTTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //