Array 1 2845-3897 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBRF010000007.1 Enterobacter cloacae complex sp. P47BA contig_0007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2845 28 100.0 33 ............................ AGCCGCCGCCGCGGGTTGTTTGCGCGGGCATTT 2906 28 100.0 33 ............................ AATTGAAGCCAATAAAACCTGAGCCGCTAAAGT 2967 28 100.0 32 ............................ CATCTGAACGACGGAATTGATGACGCTATTCA 3027 28 100.0 32 ............................ ACGCCGCCAAGTGCCTGTGCTATTCTGGCTGA 3087 28 100.0 32 ............................ CTGGCTGGTTGTCAACTCTTTATGCGGCACGT 3147 28 100.0 32 ............................ AGCCAGTGCGACCACTGCAATGTAACGTCAGT 3207 28 100.0 32 ............................ TCTGCAATTGCCACAACCACTGCGGCGCAAAC 3267 28 100.0 33 ............................ TTTTCAGTTTGTTCTGGCGCGATGCTTAATGGT 3328 28 100.0 33 ............................ TTGGTAAGCTCTCCGGGTCTCGCCCGTCAGGAT 3389 28 100.0 32 ............................ ATGATTGCAGCCCCAGCGCCGCCGACCTGCTC 3449 28 100.0 32 ............................ TGGCCGTCATGGTCGCAGTCCGGGGCCATTTT 3509 28 100.0 32 ............................ GCACGCCCCAGGACTACGCCGCAGCGGTCATA 3569 28 100.0 32 ............................ GCGGCGATGACAATGTCACCGTGCTCAGCTGT 3629 28 100.0 32 ............................ ATCGTCTGAGGCGACCGCCGCCGAGAAGTCAA 3689 28 100.0 32 ............................ TACCTGGGCTTTTCGCCTCAAAAAGTTATTCC 3749 28 92.9 32 ............G.....G......... GCTACGTTGCCCCATCGACTTAAAGCAGGACC 3809 28 96.4 33 ............G............... TAACCAGCGCGTAATCGTGTGGGATCCGGTGAT 3870 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 18 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCGCAAACGCAGCCCGTATGCCGTTGCCTCGGGGCATATCTGGAAGAGGTTAAAACCGGCCTCACGGAATCCATGCGTGATTTTCAGATAGTGGAATTTGAAGACGAAGCGGAACAACCACGACAAAAAGAGTGGCTGCTGGAAGATACAGAAACAAAGTGTGATTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGATATGCTGCCGCATCTTACAGGACTGCTCCATGACATTACGCATTCTATGGCCGCAGATGTTGTTGCGCCTCAACGTGCAGAAACGGTAGTTAACATTATTTCCTGAATGTAGTTTGTGACGTCTAGGGTAGGCTCCTGACGCCATTGGCTTGACCCTTTTTTTTGATGATAATGTAAGGTATTGATTTATATGATGAGAATTTACGTTTCAGAAAAAAGGGTTTCATGCGCGAAGATTGATTATTTTCTTTTCTAACAATAAGATAGCGTGGTTTCCTTTCA # Right flank : AGCCCCTCTGGGCTTTAATGCCGTGGAAATGGCGTTACTGTCCCACAGACAGTACAAGTAAACCCATCCCTCACAAATATTCACCTCGTCTATTTAAAAACGAAATACCATCATCCACACGCTTTCCATTTTCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTATTTGTAAAAATAATACTTTTAAAAAATAATGTGTTTTTGTTTAGTTATCACAGAAATTTCCATTCATTTGATATATATCACACTTGTATTTCTCTCATCTCCGATAACATACCCGCATTCAATACCTTGAAATTAAAGCCGTTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTGAATGGTGGGCGTGTTGAATATGTCACTCAGGAAGGAAAAGAGTCGTTTTACTGGAATATTCCCATCGCGAAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 13451-14556 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBRF010000007.1 Enterobacter cloacae complex sp. P47BA contig_0007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 13451 28 100.0 32 ............................ ATTTTCCACCACTTCTGGCGCGGCTGTTACAA 13511 28 100.0 33 ............................ TGGGAGGCTTTCGCGTCACGCGCAAAAACGCCC 13572 28 100.0 32 ............................ GACGATGTGGAAACACTCAGAACAGTAGCCTT 13632 28 100.0 32 ............................ AAGGAGTTTCATCATCTTTAATCCCGCCACGC 13692 28 100.0 32 ............................ AAAAATGAAAAAATGTTCAAAACGAGAGACTT 13752 28 100.0 32 ............................ GTTCAATATCGCGTTCGATATCGCTGACATCG 13812 28 100.0 32 ............................ CTGCCGCGAAAGCTATGGCTGAGAACTTTGAT 13872 28 100.0 32 ............................ TATATCTACCACAGCCTGCCGGCCAGCCATCA 13932 28 100.0 32 ............................ GACAGCAAAAACAGCACAGCGCCGCTCCCGAT 13992 28 100.0 32 ............................ ATCAGCCACGCCGGAAACGGCAGCAGCGCGGA 14052 28 100.0 32 ............................ AGTAGGAGCCTGAAAGTAAATCTCTTTGTTAA 14112 28 100.0 32 ............................ TGACTACATGGCACGAAAAATCATCGGAGAGG 14172 28 100.0 32 ............................ ACTAAACATACGCGGGATACCCTGCTGATACG 14232 28 100.0 32 ............................ CACTTAAACGCCATGAGGGCTTTTTTTGTATC 14292 28 96.4 32 .....................C...... TGGCTGATGCGGTTGCGGTGGATGGTCAGCCT 14352 28 100.0 32 ............................ GATAGCCGCCCACATTCCGCCCACGATATCGG 14412 28 96.4 32 .......A.................... TACAGGAGCTGAGAGTGCTAGAACCAGTTTCG 14472 28 89.3 28 ...........C...C....T....... ATAGAAAATAAGGTCTCCCCCTTACTCT C [14497] 14529 28 67.9 0 C.A.....T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 19 28 97.4 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGAGCCACGCGCTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCGACGTTACGTTCGTTGATACCTGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGGACACTGACGGGTAATCCCTGATTGAGAAATTCAATCAGCCGCATACCTCGGTTTGCGGGTAAACCCGCGTAACGCCAAAGCGCGTTATCAGCAGGTTTCTGCGCGGGGATCCAGGTTCTCATGTCACCTCCTGAGTAATGTCATTTGTCATAGTTAAGTATAGCCATTTGTCAGGATAGGAGGAATGGGTGTTTTTGTGAGGGTGATAAATGCGAAGAAAGGTGTTTTGACCCTAATTTTTAGCGGTTTTGTAATTTATTGATTTTAAATGAGTTTTCTTGGTGGGTAAAAAAGAGGGTCAGAGAAGATTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : GCAGAAACAAAACCCAAATAATTGTTCAAAAAATCGACTGAAACACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAG # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //