Array 1 10944-8161 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCMN010000150.1 Flavobacterium psychrophilum strain FPS-R9 Contig_150, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 10943 46 89.1 30 TGC.G...G..................................... AACCAAGTTCACAAGTACAAGACAAATTAT CT,T [10930,10936] 10864 46 100.0 30 .............................................. AAAACAGAAGTGCAAATTAGCAAGGAAGTA 10788 46 100.0 30 .............................................. TGGTTTGTTCCTTCGGATTTATGAGATGGT 10712 46 100.0 30 .............................................. TAAAGAAGGTACTAACGTACCTGTGGGTTT 10636 46 100.0 30 .............................................. ATATATTTGTACCATAAACAAACAAACTCA 10560 46 100.0 30 .............................................. AAAATAAACCAAGCGTGTCAGACGATTTAG 10484 46 100.0 30 .............................................. ATTGAATTAAAAATGCTTCAAGACACCGCT 10408 46 100.0 30 .............................................. CCAAATGAATAACCAAACAACGTTGAACCT 10332 46 100.0 30 .............................................. CTCACGCCTGAAGTTCTCATAGGCATTAAT 10256 46 100.0 30 .............................................. TTACGAGCCAATTAACAGTAAAAAATACTA 10180 46 100.0 29 .............................................. CCTCATTCCTGCTTCATCTGGATCCATAC 10105 46 100.0 30 .............................................. AATATGCAACTTACGGATTGTTTCTTCGTC 10029 46 100.0 30 .............................................. ATTTGAATTATTATTTCAATCTGAAAGAGT 9953 46 100.0 29 .............................................. AATTTTCTAGTTCCGTTAATGCCTCTTTC 9878 46 100.0 30 .............................................. ATAGTTTAAAAAAAATATTTGCAAAACCAA 9802 46 100.0 30 .............................................. GAAGCGGTGGTTATTCCAGAAGTAAAGCCT 9726 46 100.0 30 .............................................. ATGGAGAGAATTACAAACCACACAAACCAA 9650 46 100.0 30 .............................................. CAACGCCAGCAAGCACAACACCAGCACCAC 9574 46 100.0 29 .............................................. ACGTTCAGAATTTCACAACAGAATTGTTG 9499 46 100.0 30 .............................................. TGACAACGGGATAGAAGCAAATGTTTCTAA 9423 46 100.0 30 .............................................. GAACTTCTAAAAAAAGAAACAGAGTACATC 9347 46 100.0 30 .............................................. TCATTAACCGACACCGTTATATTTCCGCCA 9271 46 100.0 30 .............................................. TGTATGCTAAATACCAATCTGAGGGTTACA 9195 46 100.0 30 .............................................. TAGAGGCTAATGCGTGGCATGGTGCTACAG 9119 46 100.0 30 .............................................. TGACTGGGCAAAAGTAGCCGTAATAGACAC 9043 46 100.0 30 .............................................. TGATTTTCTTGAATATAGTATTTAGCACGT 8967 46 100.0 31 .............................................. GGAACCATATTTGTTATTAAATATGTATCAT 8890 46 100.0 30 .............................................. GCTAATATGTGGCTCCTTAATGGCACACGA 8814 46 100.0 30 .............................................. GCAAACCGAGTTAGAAATCGATTCGATGGT 8738 46 100.0 30 .............................................. GAGTTCTCAGTCATCTGTCTTTTGTCGCCA 8662 46 100.0 30 .............................................. GGCATAAAATGATTTATGAAGTCTATTTGA 8586 46 100.0 30 .............................................. ACGCCTGTCACTATGTCGTCGTATATTTCT 8510 46 100.0 30 .............................................. ATTTCATCTATTTGCCTTAACTCACTATCA 8434 46 100.0 30 .............................................. TTACAAAAGCAGAAGAATCTGATTCTTTAT 8358 46 100.0 30 .............................................. GGTTTGCTTGAGCAGTTCTTCTCTGTGAAC 8282 46 100.0 30 .............................................. TTAATTCTGCGAATGGATTATGCCGAATTC 8206 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 37 46 99.7 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : CAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACT # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCATGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //