Array 1 16580-16372 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCDE010000012.1 Halomonas glaciei strain DD39 NODE_12_length_125343_cov_40.864792, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 16579 28 100.0 32 ............................ AGCAGCACGCTTGCCCCGCGAAACTCGCGCAG 16519 28 100.0 32 ............................ GAAAAGTGTATCTCGTTCATGCTGAGCTGGTG 16459 28 100.0 32 ............................ TCAGGATTGAGCTTGGTGATCGTGGCGCTTCC 16399 28 89.3 0 ........................T.TT | ========== ====== ====== ====== ============================ ================================ ================== 4 28 97.3 32 GTGAACCGCCGAATAGGCAGCTGAAAAA # Left flank : ATATGGCGAACGAAGGATTTATTGAGGTTAGTGATATCAAAATGGTTCCAGCCATATCAGAAGAAGTGAGATTTATTAGAAACCAGCATGTTGCTAAATCTTTCCCAGGTGAAATTAAGAGAAGACTGGTCCGCAGCAAAAAGCGGGCGGAAAAACGCGGCGAGACGTTCATGCCTAGCAGTTCCGTATCAGATCGCTTCGTTGATCACTGCCACGTAATTCCTATTGATAGCCGATCGTCAGGCCAACGATTCCCGCTGTATGTGCAGTATGAGGCGCTTGGTCAAGAAAGCCCGTGCGATAGCTACAATAGCTACGGATTGGCTACAAAACAGATACACTCTGGCTCTGTGCCAAATCTTAAGCAGATTACCTAAATATTTTCAGAATATATATTGTTATATTTTTCAATGGCTTAATTAAGATACGCCAAAAAGGGTATTTTTAGTATTTTGTACTTATCTTGTTGATGCCTATATTCATACTGCTAGCTAGGTCTA # Right flank : AGGACTGGAAGACAGCAACGGTAATGATACACACCGCCGCAAGGCAGCAATAGTTCTAAACCCTCCAAGATTTCTTGGAGGGTTTTTTGTGGTGCTAGGTGAAGGCTATTTCTGAAGATGAGTTGGTTTGCTCTTAGAGCACCAGCCGGGGTAATAATGAATACCCACCTTCACGTCACACCGCCACACTCCATAGCGAAGAGTAGACGCCGAACCTGTTTTGCTTCGATATCAGTGCCGCATAGCATGACAGGTGCCTGTCCTCCCAGCGCTTCGTTCGAACTAGACATCCAGTTTATCGTAGCCAGCTTGTTCTCGAATACCTCCATTGCGAGGTGACTTACGGTCGCAACCCTATCAAGACGTTCTGATGCCACGGAGTCCAAATTTTTCCTTTCACGTCTGCGGTGGTGAACTGCTGATATGGATACATTAAACAATGCCTTAACCTGCTTATCCTGTAGCTGAAAGGTCTCTTGCACTGTTAGGAATAATGTTGG # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAACCGCCGAATAGGCAGCTGAAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 24244-15257 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCDE010000014.1 Halomonas glaciei strain DD39 NODE_14_length_122219_cov_57.469140, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================================== ================== 24243 28 100.0 33 ............................ CTGGCGGGAACTCTTCTTTTAATAAATCTTCAA 24182 28 100.0 32 ............................ ATTTGGGTGATGGTGGCGGGGGTATGCCACGC 24122 28 100.0 32 ............................ ATCGGCTTTAGCGTCTGGTCTGGAAGCGCCTA 24062 28 100.0 32 ............................ ATTACAATTGGGATATTTGTTTAACAACGCCA 24002 28 100.0 32 ............................ TGTGTCGCATAAAACTGATGCAGATTGCGAAA 23942 28 100.0 32 ............................ TATGGCGACTCGAATGGCTGGCATCCGCATTC 23882 28 100.0 32 ............................ TTAGTAATCGAAAACGTATCGCCCGGATGCGT 23822 28 100.0 32 ............................ GAAGATGAAGCCAAAGCGCTCGACGTTAACGC 23762 28 100.0 32 ............................ AACACTAGAAACTAGTGAAGATCCCAGAACTA 23702 28 100.0 32 ............................ AGACGTACGCTAGGCATTGCTCTGATATTTCG 23642 28 100.0 32 ............................ GTTAATCAGCGAGGCGTAAACCTCATCATCGT 23582 28 100.0 32 ............................ TATCATTGTCATTATGCAGCGGCTTCATGAAG 23522 28 100.0 32 ............................ ATGGATCAACGTTGGCGACACCACGGACGAGA 23462 28 100.0 32 ............................ CGCCAAAATATCTGTCGTTTGCGCTGGATATT 23402 28 100.0 33 ............................ CTGTCGAAAACGAAAGGCCATGCTTTAAATGTG 23341 28 100.0 32 ............................ AGCAAGACGCAGCCTTACACAAACATCAAGGC 23281 28 96.4 32 A........................... CATACCTCTGATGCCCGCTGGTCAGGCTCAAC 23221 28 100.0 32 ............................ TAGAAAATAGCAGTCTGCGCGATACTGCTAGA 23161 28 100.0 32 ............................ TCACCAGCCGCACCAAACTGCGCCATGGCAGA 23101 28 100.0 32 ............................ TCGCCCTCTTCGAGGTCTTCGACTTCCTGCAT 23041 28 100.0 32 ............................ TGCGAAGAACTACGCGTGATTACCGGCTACCA 22981 28 100.0 32 ............................ ATCATCGCCGCCCCCATCGTTAATTGGTTTAC 22921 28 100.0 32 ............................ ATTAAAGCAGGCGTTAACAATATTGGAATAAC 22861 28 100.0 32 ............................ GAGTAACGTTATCTATTGGGCCTTCTGTAAAT 22801 28 100.0 32 ............................ ATCCCCATCATCATCACCCGTACCATCACCGT 22741 28 100.0 32 ............................ TGATAAACAGGGTGTTTGCTGCGGCGGTCGTC 22681 28 100.0 32 ............................ ATAAACAGGAATATGTTCCATATTTTTATGAT 22621 28 100.0 32 ............................ ACCTGGCGCCTCTTCTTCTTATAGAATCGTTT 22561 28 100.0 32 ............................ AGCCGTACCCGCTCCCTTTTACGTTAAACATT 22501 28 100.0 32 ............................ GCCGCCAGAGCCGCCAGAATCCTCGCCACCAT 22441 28 100.0 32 ............................ ATGATATCGAGCTATGCGGGTCAATTGTCGCC 22381 28 100.0 32 ............................ ATGGACGCGCTTGCGATATGATCCTGACCGAT 22321 28 100.0 32 ............................ GTTCTTTTCCGTGAACGTTACACTGGGGTACT 22261 28 100.0 32 ............................ TTGTTCAACCGGCAGGGAGTTCAGCAAATCAA 22201 28 100.0 32 ............................ AGGCACCCGGTAAACTGGTGCTATGAATCTGA 22141 28 100.0 32 ............................ AGTGCCCGTTAGTGACCCACGAACCCCTTTAA 22081 28 100.0 32 ............................ AGAATTGGTTACCGATAGGGGCGGCCATGAAT 22021 28 100.0 32 ............................ TTTCACGCCTCACGAATGAGCTAAGCCAGCCG 21961 28 100.0 32 ............................ ACAGCGGCAAACTGCTTGCCAAACTTTCTGAT 21901 28 100.0 32 ............................ CGGAGGGGTGGCAGGTGGTGCCGCTTGAACCG 21841 28 100.0 32 ............................ TTCCGCGTAGTCGTACAGTTGACCTATGCTCA 21781 28 100.0 32 ............................ CGAAGCAATCGCAATAATGGAGATGGCTCAAT 21721 28 100.0 32 ............................ AAGAGATCAAAGACGCGCTCGAGCATCTTAGC 21661 28 100.0 32 ............................ ATCGCCTAACGATTTTATCGAGCTAGGCAATA 21601 28 100.0 32 ............................ ACGCATTCCAGGCTTTGCTGATTCGCGCTGGA 21541 28 100.0 32 ............................ GCGGTGGATGCGGGCAATTGAAGAGCAGGAGG 21481 28 100.0 32 ............................ ATCAGGTACGTACCACGCTGCAGATTAATCAG 21421 28 100.0 32 ............................ CATGCCACGCAGGCCGTTCTCCATTTCCTGCT 21361 28 100.0 32 ............................ TTCTGAAAAACCAGTCAGCGCTAACGTGCTAG 21301 28 100.0 32 ............................ TTCGATGACTAGCGGGCCAGACCCTGTATGAG 21241 28 100.0 32 ............................ CGTTAGCAGTGTTGCTATCGGTCTCTATCTAT 21181 28 100.0 32 ............................ CTAGTCTTTACGCCTTGCCGCTAGTACCGTGC 21121 28 100.0 32 ............................ ACATTCTCCACTTCCTTCCTCGGGTTAATGGG 21061 28 100.0 32 ............................ AGACATCGGCGACTGCTGGATAGGGACTAGCA 21001 28 100.0 33 ............................ GTTGCCTCCGATATTGTTGGTTGCGTATTTGTC 20940 28 100.0 33 ............................ ACTGATGAAGAGTAAGGGCGCACAGGATTATTG 20879 28 100.0 32 ............................ TGAAGAACTGGTCGGCGAATACGCTAGAAAAC 20819 28 100.0 32 ............................ TGCTGCTGTGCCGCCATCGGGTAAAGCTTTGC 20759 28 100.0 32 ............................ TGATCGAGCAAGGCGTCAAAGTATTCAGGGGT 20699 28 100.0 32 ............................ GTGGCGGGTGTTTTGGCTACATCGTTTTACTT 20639 28 100.0 32 ............................ GTGCTGGGTATCTGTCTGCACAGCCGGGCCAG 20579 28 100.0 32 ............................ GCTTGGACTAATCTCCTGGGTAGAGCGAGTAT 20519 28 100.0 32 ............................ GTAGAGTGGATAGTAAAAAACGTATTGCAACA 20459 28 100.0 32 ............................ AGCGGCGGTCAGGGCCTCTCCAATGCGGAGAC 20399 28 100.0 32 ............................ TCATCCAGCTCGGCACGGCGCTCAACGGTTTT 20339 28 100.0 32 ............................ TTGATCTCATCAAGCAAGGCTTGCGGAATATC 20279 28 100.0 32 ............................ ATGGACGCGCTTGCGATATGATCCTGACCGAT 20219 28 100.0 32 ............................ GTTCTTTTCCGTGAACGTTACACTGGGGTACT 20159 28 100.0 32 ............................ TTGTTCAACCGGCAGGGAGTTCAGCAAATCAA 20099 28 100.0 32 ............................ AGGCACCCGGTAAACTGGTGCTATGAATCTGA 20039 28 100.0 32 ............................ AGTGCCCGTTAGTGACCCACGAACCCCTTTAA 19979 28 100.0 32 ............................ GTAGAGTGGATAGTAAAAAACGTATTGCAACA 19919 28 100.0 32 ............................ GAACATCGCTAGCTCAGTGGTATCAAAGGCCG 19859 28 100.0 32 ............................ ATTAGCTCACACAGCTCGGTGACGACGCCCAC 19799 28 100.0 32 ............................ ATGAAGTACCTGGGCGGCTCCGAAGACCTCGA 19739 28 100.0 32 ............................ GTGATGTCAGCGTACGACGTGGGCGATTCCGC 19679 28 100.0 32 ............................ TCGCCGCCCGCAACGATTCAGGCCAGCAGCGG 19619 28 100.0 32 ............................ TTCAGTGATCCGCACGTTTGAGGGTGCGCCCA 19559 28 100.0 32 ............................ ACAATCGCATAGCGATAGCTCATAAATAACCT 19499 28 100.0 32 ............................ TTTTAGTGTGCGTGCTATGCTTGATATCTATG 19439 28 100.0 32 ............................ ACCAAAACTCAGCATTAATAGCGCGGCGTATG 19379 28 100.0 32 ............................ AGTTAGAGAATCGTGTTAGGTCGGGAAGGAGG 19319 28 100.0 32 ............................ CAGATGTGGAAACAGGCAACGCTGCAGTCTCC 19259 28 100.0 32 ............................ TATCTGGAAGCCACGCCGCGTGAAGCCATCGC 19199 28 100.0 32 ............................ ATACGATGGGCTGACCATCGCGGCGGGCGATC 19139 28 100.0 32 ............................ ATGTCGATGTCATCGTCAGAGATCCCCACCTG 19079 28 100.0 32 ............................ AACTACGGTACCGGCGAAATCGTTCAACCCAT 19019 28 100.0 32 ............................ ATCAACGCTCATGATGACGATATGGCCGGATT 18959 28 100.0 32 ............................ AATCATCATGCTCAGATTGTAGGGTATGTTGG 18899 28 100.0 32 ............................ TGCAAGCCGTGGTGCTGATGCCCGGCGGACTG 18839 28 100.0 32 ............................ ACGATCATTACCTTGGGCTTTTGCGCCGGGGC 18779 28 100.0 32 ............................ TGCTGATAAATCGCTTCAATCTGCACGGGGGT 18719 28 100.0 32 ............................ GGCATCAGCCAGCTAAACACGCTGCTGAACAG 18659 28 100.0 32 ............................ TCTGCATAGAGGTCGTCAACTGTAATACGCCA 18599 28 100.0 32 ............................ AAAACTGCCGGTAAAAATGGCGCGCACCTCCG 18539 28 100.0 32 ............................ CCAGGCAATCGGATATCTAAACGCTAAATAAA 18479 28 100.0 32 ............................ TAACCCCAGTACAAACAGACTTACTAGCCGAT 18419 28 100.0 32 ............................ GATACCGATACTCCAGCTAGGCAAAACATCAA 18359 28 100.0 32 ............................ AATCCGGAATTTCAGAATCATCATTAAATAAA 18299 28 100.0 32 ............................ GATGAAACTCATAGAGATTTCTCCTTTACGCC 18239 28 100.0 32 ............................ CCGCAGCGAAACGCCAGCGTATTCAGCGGGAT 18179 28 100.0 32 ............................ TCAGCGATTGCCAGCACAAAAGGCGCGAGCTC 18119 28 100.0 32 ............................ ATCACGGCGGTACCGCCATCCCAGCCGTACAT 18059 28 100.0 32 ............................ ACGGCCAAGAGCTCATGACCATGGAATGGACG 17999 28 100.0 32 ............................ CTAAAGCCACCGAGGGCGAAGACGTGCTAACG 17939 28 100.0 32 ............................ TGATTGAAAATCAGGTATATCAACCTGTTCAG 17879 28 100.0 32 ............................ ATCAGGAAGCTTATAATTAGAAAAGAGGGCAA 17819 28 100.0 32 ............................ TTCGCTAATAAAGAAGGGGTTCAGATGACTGT 17759 28 100.0 32 ............................ AATATTCATTTTGTCAAACCTCTCATCTGCTA 17699 28 100.0 32 ............................ GATCTGCCCGTCTGTGAGTGTTGGTTCCTTGA 17639 28 100.0 32 ............................ AGCCGAAATGACGTTAATTTGTGTAGCTAGAG 17579 28 100.0 33 ............................ AAACAACGAGTCTGTATTCATTGGCACCAACTC 17518 28 100.0 32 ............................ AAACCGCGATTAAAGGCACTAACGATCGCATC 17458 28 100.0 32 ............................ AGTGCCGCGTATAGATTAAATAAAGCAGCGTT 17398 28 100.0 32 ............................ ACTACCGTGATTTCAGTATCAGTCGAAACTAA 17338 28 100.0 32 ............................ GTCAGCCGGGTTCGTGAACTTAGAACCGTCCA 17278 28 100.0 32 ............................ AACAATAGATCCCGTATAACCGCTATTATTAA 17218 28 100.0 32 ............................ TGAGCACACCGCTATTGAGCGTTCGCCAGTAG 17158 28 100.0 32 ............................ CACCTCGCCGCTTTGTGAAAATAGATTCCCTG 17098 28 100.0 32 ............................ ATTAACGTCCAAGAGAAGCTCACTCCGTCGTC 17038 28 100.0 32 ............................ AAAACAGCTTACAGCGTTACCCTTCGCGGCCA 16978 28 100.0 32 ............................ ATACGGAAACATGCCCGCCCGGTGTGCGTACT 16918 28 100.0 32 ............................ AATGGGATATAAAATTGCAGTGGTCAGCCAGA 16858 28 100.0 32 ............................ GTTTAAGCATTTCAATCATGCCGGGCTTTTCA 16798 28 100.0 32 ............................ CCGGCGCGGTGGCCAACCGCGTTGAGACGATC 16738 28 100.0 32 ............................ ATTTGACGCAATTTGTCCGCGGCTTCTGCAAT 16678 28 100.0 31 ............................ TGTACTCAGAAGGACTAACGACGACCATCAA 16619 28 100.0 32 ............................ TCGTTGCCCGCGAACGTAAGCGGGTCAGTTTC 16559 28 100.0 32 ............................ TGGATAAGGGCTTCCATCCCCTTGAGTAACTT 16499 28 100.0 32 ............................ CTCAATCCCCAAGCCGTATTGGTAGTAGTAAA 16439 28 100.0 32 ............................ TAACCGCCGTAACCTGATTTAAAAAAAGGCAC 16379 28 100.0 32 ............................ CGGCATAAACGCCTGCCAGTTAATGTCGGCGC 16319 28 100.0 33 ............................ CAGATAGAGCAAGTGGTGGTCAATGCTGAGGGC 16258 28 100.0 32 ............................ ACGCCTAGCGAAATTCCAGCGGCTATCTCAAC 16198 28 100.0 32 ............................ TACAACAGATATTCTAGATACAGGTACATCAG 16138 28 100.0 83 ............................ AACGATGGAGGGCACCACTCAGCAGACGCGCGGTGCGCTGCCGCCCAGAAAAGGGTTATCAGCATAGCTGGGCACGTTAGCGA 16027 28 100.0 32 ............................ TACAGGTTCAAGCTTGCGCGTTTCAATTATGC 15967 28 100.0 32 ............................ ATGTCCGTGAACGCCAGCAACGCTGTCGCACC 15907 28 100.0 32 ............................ TGCCCGTGTTGCTCCGTCCTCAAGAGTTCTTA 15847 28 100.0 32 ............................ CGACGAACGCCGCCAGTGTTTGGGTTAGCACT 15787 28 100.0 32 ............................ GTTGTCGTGTGTGCGCTGCTTTGAGCTTGCAA 15727 28 100.0 32 ............................ AACAACTGAGTAATCATTTTGTCAATTTCGAT 15667 28 100.0 32 ............................ AGGTGCGGGGCAGTGATGCCGTTGGCGTGGCT 15607 28 100.0 32 ............................ GCCAGCGCTCACGGATTCGATGCGTTTGGGCG 15547 28 100.0 32 ............................ AGTGAGCCGCGCATTCAGTTCGGGCCATCCAT 15487 28 100.0 32 ............................ ATCCGGGAGAAGGCTAATCATTGGGTCAAATA 15427 28 78.6 114 ............T.........TT.CTG GTTTTAATGTGTGTGCCCGAGGCACCGCTTTTCGGTGCTTTCGCACCGGGCCGCTGCGTCTGAGGCTTACGCCATGCTACTCGAAATGTGGATTACCTTTGATGAGTGGAAAAG 15285 28 71.4 0 ...G.T..TA.TT....TC......... | A [15281] ========== ====== ====== ====== ============================ ================================================================================================================== ================== 148 28 99.6 33 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CACGTTTGCAGCAGCTAATGAGTGCCGGCTGGCTAACCGGCATGCGTGACCACACCCAGGTGAGCGAAGTGCTTGCGGTGCCTGCTGATGTTCAGCATATCAATGTGGCGCGTAAGCAGTTTAATACGGGCAGTGAAAGCCGGGCCAAACGTTACGCCAAACGGCATGATATCTCGGAAGACGAAGCGCGGAAGATTTATGCCAAGCTGGCGGAACGGCGTATTGAGCTGCCCTTTGTGCAGATCAATAGTCGTTCTACCCAGCAGCGTTTTAGCCTATTTATCGAACACAGCAAGCCTCAGGAGAGCTCGGTGGCGGGAGCGTTTAACCACTACGGTTTAAGCAGTAACGCGACCGTACCGTGGTTTTCACCCTTTTTTTCAACATGAAAATTGGTAACAAATAATCAACCACTTAGCGGTATCGCTCAAAAAAGGGTGATACCGCTTTTTTTGGCTAAAGCTCTTTAACAATCAGCACATTAATTTTGATATGCTCTA # Right flank : GGCGTGGGAGTTCGAGTCTCCCCATCCGCACTGTGCTTTTGGAACGGTTGCGTTTTCGCACTGGGCCGCCTTCGCGGGCGCGCTGCCGCTTACCACCCGCTACTCGAAATGTGCTTAATCTTTGTTTGTGGCAAACCGGACGTCGCTGCTGAAGAACTCAGGCTCTGACACTAAAAAGCCATCACGTTGGATGGCCTCTGTTACTGAAATCAGGAACGCGCTAACGCGTTACTCTTCTTTCGGCGGGGTTTCCATGGCGCGTTTGTCGTCGGGAACTCTGACGATGTGGCCGATATCGAGTTTGCTGTGGCTTTGGTGGCGGCCGCCTTTGGCGTCGATGATCGCGACGACTTCACCAATGCTTACTGCGTCATCTTCGCGGTATGCTTCTACCTTGATGCGTACCATGGCACCTTGGTAGCGGGCAGAAATAATGTCGCCTGGGTCGGGGGCGTTATGGTCAGGGTCGTTTTTAAAGTACTCCGCTACGCTGGCGCTAC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //