Array 1 2233946-2235658 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039119.2 Flavobacterium psychrophilum strain FPS-S6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 2233946 46 69.6 29 TAAT.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG 2234021 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 2234097 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 2234173 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 2234249 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 2234325 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 2234401 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 2234476 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 2234552 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 2234628 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 2234704 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 2234780 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 2234855 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 2234931 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 2235007 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 2235082 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 2235158 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 2235233 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 2235309 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTTAGC 2235385 46 100.0 30 .............................................. AATCAAAATAAGGTTTTAAAAGCGGCTTGG 2235461 46 100.0 30 .............................................. AGGGCTTCGATTTTCTCGGGTTTCCATTTA 2235537 46 100.0 30 .............................................. CGGTAACATCGATATAACTTGCGAGCTGGT 2235613 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 23 46 98.6 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TTGCGTGGTACATCAAATTAGAAACGCTTGTAGATATGTGGTATGGAAAGACAAAAAACAATTTACAACCGATATGAAACTTGTTTATACAGCACCAACAAAACAAGCTGCCGCATTAGCTTTGGAAGATTTTGCTCAAAAATGGGAATCCAAATATGGTTATGCCATCAAATCCTGGAGAGAAAACTGGGACGAATTAACCGTGTTTTTCGACTTCCCGCTAGAAATTCGAAAAATAATCTATACTACAAATTTAATAGAAAATTTAAATGGAAAAATTAGAAAATACACTAAAAATAAAATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAAA # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //