Array 1 1125563-1127188 **** Predicted by CRISPRDetect 2.4 *** >NC_017449.1 Francisella hispaniensis, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================================================ ================== 1125563 36 83.8 35 ........TA.........C.........-A.C.... GATTAGTCCAGCAAATGAAAAAAGATTAGCTGTAA 1125634 37 89.2 44 .......................C.....AG.....T AGGGTTAGGATTAACCTAACATATAAAGAACAATTAGCTGTAAA GT [1125656] 1125717 37 75.7 108 T....GT..AT...G.................T.C.A TACTGTACTTGAATTGATATTTTGCTATATAACTATTTTAGCGGTTATATTATCTGATATACTTTACCCAGATAGAAACTTCTAAATATTATTCGTAAAATTAATTAA 1125862 37 70.3 31 .....G........G.........G...AATAAAA.C TTACCTGTTTGATGCTAGGTATTAGTGTTAT 1125930 37 91.9 35 T.A.A................................ GGTATGACAATGACTATAACCAACACTCGTCCAGA 1126002 37 100.0 37 ..................................... TTTTCTTAATCTTAGGGTATCTAAATACAAATTCTCT 1126076 37 100.0 35 ..................................... AATAAGCATTTCAAGATATTTTATTTAATTTTTAT 1126148 37 100.0 35 ..................................... TCTAATGTAGAAGCTATATTATCTATTTCACAATT 1126220 37 100.0 34 ..................................... CTGGTGGAGGCGGTCAAACTGGCGGCGAGGGTGA 1126291 37 100.0 34 ..................................... AGTGCTTGAAACTTCAAGCCTGTTGTTGAAACGG 1126362 37 100.0 35 ..................................... ATAATATGCTTAACAATATGTTTTCTAGCGATATT 1126434 37 100.0 34 ..................................... TTAAGCCAGATAATGAATATCAAGAGTATGTCGA 1126505 37 100.0 36 ..................................... CAATTATGGAACGATTATGGGGATTGGTTAGATGAA 1126578 37 100.0 36 ..................................... CTATATTGGGTTATAAAGTTCAACTTCGAGGCGTTA 1126651 37 100.0 36 ..................................... TGCTATGAGCATTGCAGGCAAAACAAATAAAAAAAA 1126724 37 100.0 34 ..................................... CTGCTGCCGATACGGGTACAATTCAGGTTATATG 1126795 37 100.0 34 ..................................... TGCCATACGATACAGCATATATTTCTTTTTTAAT 1126866 37 100.0 34 ..................................... ACCAAAGCAACATTGCAATTGCAGATAGTGCTGG 1126937 37 100.0 34 ..................................... TTGTAGGCTGTAAAGGCTCAAAGGCTGTTATTAC 1127008 37 100.0 34 ..................................... CCTCAACTTTAGCCTTAGGCTCAGTCTTTTTGGC 1127079 37 100.0 36 ..................................... TGTTACTGGTTTTGCTGAAGGTGGTTATACTGGCAA 1127152 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================================================================================ ================== 22 37 96.0 39 GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAG # Left flank : ACAATGAACACATTTGAGATTACAACGTCTGGTTGTTTCCCATGCCATCCATTTAAGTTGATTTTTCACTAAATTCTTAATCCAAAACGAAATATAATTTTGCTAATAGATATTATAACAAATAATCATTAAACTAACTGTATAAAGCTACTAAAAATAACTTTTAAAAGGCTATTTTAGAAACTCTTTTATTTTGCTAGTTTGAGCTTTTTATTTATACTCTATAAATACTGATAATCTCAATATTAGTTATGATTACACTTTTGTTGTTAGCTATGGTATTTATGGCAACTTTATATTCTATATACTACTTTATTTTAGCTATTATTAAGCTAATTGCAGCCATATATCATTTTAGCTATTATTTTTAACTGATTCAAAAAATAATTAATCCATAAAATAAATTGCTTAAAGTCTCTTAAAACTTTGTTTACATAGCTCTTAGAATTAGGTTTTCATAAGCAAGTAATGATCTTACTAAATATTATTTTTTTTAATAA # Right flank : GAGCCAAGACAAACCTAGAGTTTGCAAGGCTTTGAGAGAATTATTTGCTGGTGTTTTTTCGCAAACATCCTACTTGTAAAAAAATGTAGACATTTTGCGAAAAAATATCTACAATTAAAAGCGTACCAAATAATCAATGCTCTGTAATCATTTAAAAGTATTTTGACCGGACCTCTGTTTGACACGTCTGAATAACTAAAAGTAAAAATTTGCCACTCAAGTGGCTTTTTTTGCTAGTGGATAATTTATTTGAGCTTTGTATAGCTAACCATAGATAAAAATGTCAAGCTAAATTTATTTCAGCATCTCATTATAAATATAGATTTTATAAAAAAAACATAATTACATAATTGATGACAAAATTTACTACTTTTATGCCTAGCAGACTATATCTTTTACTTTATGATATCTTTTTAGTTTAAAATTATTCTGACAAGCTCGAAGGAATTTGATTTTAGCGATCATTACAGAAATTTAAATACTCACACTGTATACATTGA # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.29, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTAGCTAGATTATTTGATATACTGCTGTTAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [35-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //