Array 1 263063-266807 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEPVG010000003.1 Klebsiella pneumoniae strain k7 NODE_3_length_451397_cov_38.119649, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 263063 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 263122 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 263183 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 263244 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 263305 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 263366 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 263427 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 263488 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 263549 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 263610 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 263671 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 263732 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 263793 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 263854 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 263915 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 263976 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 264037 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 264098 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 264159 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 264220 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 264281 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 264342 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 264403 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 264464 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 264525 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 264586 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 264647 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 264708 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 264769 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 264830 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 264891 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 264952 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 265013 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 265074 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 265135 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 265196 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 265257 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 265318 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 265379 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 265440 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 265501 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 265562 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 265623 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 265684 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 265745 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 265806 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 265867 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 265928 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 265989 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 266050 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 266111 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 266172 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 266233 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 266294 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 266355 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 266416 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 266477 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 266538 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 266599 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 266660 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 266721 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 266779 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 62 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //