Array 1 190656-194583 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJRA01000006.1 Klebsiella pneumoniae strain EuSCAPE_TR121, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 190656 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 190715 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 190776 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 190837 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 190898 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 190959 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 191020 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 191081 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 191142 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 191203 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 191264 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 191325 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 191386 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 191447 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 191508 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 191569 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 191630 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 191691 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 191752 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 191813 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 191874 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 191935 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 191996 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 192057 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 192118 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 192179 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 192240 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 192301 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 192362 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 192423 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 192484 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 192545 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 192606 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 192667 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 192728 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 192789 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 192850 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 192911 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 192972 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 193033 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 193094 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 193155 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 193216 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 193277 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 193338 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 193399 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 193460 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 193521 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 193582 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 193643 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 193704 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 193765 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 193826 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 193887 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 193948 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 194009 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 194070 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 194131 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 194192 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 194253 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 194314 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 194375 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 194436 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 194497 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 194555 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //