Array 1 2896-2261 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGRV010000084.1 Klebsiella pneumoniae strain 4928STDY7071550, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2895 28 96.6 32 .....-....................... GCCATGCAACGTCTGAACGTCCGAAACATCCC 2835 29 100.0 32 ............................. AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC 2774 29 100.0 32 ............................. CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG 2713 29 96.6 32 .............T............... TCGAAGGCAACCACCAGGAACAATAAAACCCC 2652 29 89.7 32 .A..........TG............... CCGACCCGGTGCCCAGGAGAACTGGCTGAATA 2591 28 89.7 31 .....-.......G.A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 2532 29 96.6 32 ..........................T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 2471 29 93.1 32 ............TC............... TTACGCATTGTGATCAGGATTCGCTTCAGACG 2410 29 96.6 32 ............T................ TCGCCCAGTCCAAAGGGGATGATGCAGGATTG 2349 29 96.6 31 .............T............... GGCATGAGCGCGAACCACTGCGAGAGTGTGG 2289 28 75.9 0 TGTA.T.................-....A | A [2278] ========== ====== ====== ====== ============================= ================================ ================== 11 29 93.8 32 GTATTCCCCCCGCATGCGGGGGTTATCGG # Left flank : TCCTGAGCGTATTGCCGGAGTGGCCCATCAACAAAGTGGCCGAACTGCTGCCATGGAACGTAGATCTCACCAATAAATAGCCGTCAATACGGCGCTCACTTAACGCTTACGGTCACTTTTGCGTCGAGCCAAGTTATTATCTC # Right flank : CATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGGGGAATTTGAATTGACGCGCTAGCGTTAAAGGAACATTTAGCCGTGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAGCTGCGTGACCAGAGAACAGGCTTATTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACATGATCGGCTTTTCCGTCACATTCATTCAGCTCAGCACCAAAATCACCGCAAACTTCACCTGCATACTGATTTACTTTTTCCAGATGTAACTCACCGAAAAC # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCATGCGGGGGTTATCGG # Alternate repeat : GTATTCCCCCCGCTTGCGGGGGTTATCGG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //