Array 1 8065-8560 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGGI01000013.1 Oceanotoga teriensis strain DSM 24906 Ga0215701_113, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8065 30 100.0 36 .............................. GCTACCATCTAAGCTTTCCACAATCTTGTGATTATC 8131 30 100.0 36 .............................. AGAAAATCCAACGCATTTATACCCCAGTCCCTCATG 8197 30 100.0 37 .............................. TTAGCACTTTTTGTGCTAAATCCGTCGGGGTATCTAA 8264 30 100.0 37 .............................. AGCTTTTGAAAGACTTGATATTTCTTTTTCTGATAGA 8331 30 100.0 36 .............................. ACAATAGCCTCTTTTAAAGATGTGTTTATTTCTAAA 8397 30 100.0 38 .............................. ATTTCCCTCCTCTGACTTGTTCACTTAGTATGCACATC 8465 30 96.7 36 ................G............. TCTTCTGAATAAGTTTCCTTTCCGTATGGATTTTTG 8531 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 99.2 37 CTCTAACAATAACAAGAATTGTATTTAAAT # Left flank : GTGAAAATCAATGTCCAAGAGATGATGAAAAAGTTAACCCAGTTAAATTTTTAGTTTTAGAAGGAGATAAAAAAGAAGAATACGATTTTGAATTTAATCTATTTATTGATAAATTAAAAGTTAATAAAAAACTAAGCGATTACAAAAAATCTGAAATTTCAAACTCTGAAAATGAAAATAAAACATTAAAAGAATTTATAGAACTAAATTTAAAAGAAGCATTAGAATTAAATGGAATTGGTGGAAAAACATCTGTTGGATACGGATTTTTTTCATTTGACTAAAAAGAAGATTTAAATCTTCTTTTTGGTTTTTTATAATAAAAAATTTCCAGGTGATGGAAGTTGAAAAACTGATAGAAATAGTATATAATAATAATTAGGAAAGAAAAAAGGAAGAAATTTTAATTGAGATGAAATCGCTGGAACTAAAATCAGTAAATGTATTGATAATAAGTGTTTTAGCATATTGATGATTTCTGGAATCCTTTATTCATGACT # Right flank : CAGTTCTTCTTTCATGTTTCTTTCCTAATCTTATTTAATCTATTAAGCCTATAAAATTCCAATAAAAATTTATTTTTTAATTTTATTAATATTGTGTTATTTGTGTGTTATAATTAAAAAGAGGTGACATAATGGATATAAATGGTACATTAATTAATTATTATTTCCATTGTAAGAGACAATGCTGGTTACATGCAAATAGAATAAATTTAGAAAATGAATTTGAGTTAGTTGATATTGGAAAAGCTATGCATGAAATAAAATTTAACAATAAAAAAAATTCGGAAATAAAAATTGATAATATTTCTATTGATAAGTTAACTAATGATTATGTTATAGAATATAAAAAATCTGATGCAGATATTGAAGCTGCAAAGTGGCAACTTTTATTTTATTTGAAAGTACTTAAAGAAAAAGGTATTGATAGAACAGGAAAATTAATTTTTGCTGAAAAGAATAAACAAAGCAAAAAGACAATAGTTGTTAAATTAGATAAAGAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTAACAATAACAAGAATTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 7552-5073 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGGI01000016.1 Oceanotoga teriensis strain DSM 24906 Ga0215701_116, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 7551 30 100.0 36 .............................. AAAGAAAGATATTAAAAGTAGCTACGACGCCATTAA 7485 30 100.0 36 .............................. GATGGGTTGGTGATTAGATGACAAAAGAAGAATTTT 7419 30 100.0 36 .............................. TTTATTAAGACATTTAATTATCATACTTATATTAAT 7353 30 100.0 36 .............................. AACACTTAAGAATATCAATTCAACAGGTTCATTTTT 7287 30 100.0 37 .............................. GCTGTTTTTTCTAAAGAATCTTGATACATTTTAAGTA 7220 30 100.0 36 .............................. TATTTTTTCTTGTTGTTCTTGGATTCTTTGTGCCAT 7154 30 100.0 36 .............................. TAGTAAATTTCATAATTTCACCCTCTTTCAAAAACG 7088 30 100.0 36 .............................. AAAGTTCAGAAAATGATGATGTTCATTTGGATGTAT 7022 30 100.0 37 .............................. ACTGGTAAGGTCTTACGTGTATATTTTTTTCAGCAAA 6955 30 100.0 37 .............................. GATTAATTGATAAAGAAACAGCTATAAACAAAATATC 6888 30 100.0 36 .............................. ACTCTTACAATGAAAAATCCTTGGTCTTTTAACATC 6822 30 100.0 36 .............................. GCTACTTTCGAGCTATTTAGTTTATTATTTATAGCT 6756 30 100.0 36 .............................. TTTTTACAACCTCAGTCTACTGACTTTAGCAAAGGT 6690 30 100.0 36 .............................. AAAACAAGTGCAGAAATTTTAAAGCATGTTGATTTA 6624 30 100.0 37 .............................. CAGTGTTAGTCAAGCTTTTGATAATAGTTGGCAAGTA 6557 30 100.0 36 .............................. CATTTCAGTTAAATTATATCAAAAAAGACAAAAAAT 6491 30 100.0 36 .............................. GTTGGCAATTTTACAGGAAGTTATAATCACAATGAA 6425 30 100.0 36 .............................. GTAGGAACTTTCACTGGGAGTTATAATCACAATGAA 6359 30 100.0 36 .............................. TTTTTCTGGAGTAATGAATTTCATTTCTTGAAGTTT 6293 30 100.0 36 .............................. ACAATTGGATGTAGTTTGTTTTTATTATAAAACGTT 6227 30 100.0 37 .............................. TTGAATTATAAGGTGTCTGAACGGGCTTTCATGAAAA 6160 30 100.0 36 .............................. AAAGAATTTAAAAATTAAGAATTAAAATGAAAGTAA 6094 30 100.0 36 .............................. AGAACTTCTAAAGGAATAATAGAAGTTTTAGACATT 6028 30 100.0 37 .............................. ATTTATAATATAGTAAGTTATAGAAAGTTTGTTAATA 5961 30 100.0 36 .............................. AGAACTTCTAAAGGAATAATAGAAGTTTTAGACATT 5895 30 100.0 37 .............................. ATTTATAATATAGTAAGTTATAGAAAGTTTGTTAATA 5828 30 100.0 36 .............................. CCTTACATATCCGTTTTTTAAATATTCAAGATGTTT 5762 30 100.0 36 .............................. AGAACTTCTAAAGGAATAATAGAAGTTTTAGACATT 5696 30 100.0 37 .............................. ATTTATAATATAGTAAGTTATAGAAAGTTTGTTAATA 5629 30 100.0 36 .............................. TTCTTTTGCTGAAAGTTTTAAAGGAAAAGTTTATTT 5563 30 100.0 36 .............................. GAGGGAGCTATTTGGTATAATCCAAATAACGATAGT 5497 30 100.0 36 .............................. GAATTATTAGAATTTACTGAAATGAAAGATACTGAT 5431 30 100.0 36 .............................. TATGGTGGAAGAATAAGAGTACAGGATATATTTTAT 5365 30 100.0 36 .............................. TTTGATTTATATGATGTAATATTTACAGATGAATTG 5299 30 100.0 36 .............................. AATAAATAAGTAGTATTTTCTAACTTATTCATGACG 5233 30 100.0 35 .............................. TTATTATATGATCCAGCATTTTTATATCTAGAATT 5168 30 100.0 36 .............................. GTGGTAGTCATTCCACAGGTCAAAATATTTTTCTTC 5102 30 90.0 0 .................G.......A.G.. | ========== ====== ====== ====== ============================== ===================================== ================== 38 30 99.7 36 ATAATAATCAAACCATATTGGAATATAAAT # Left flank : GTTTTCTTTTGCAGATATTAAAGTAATATATATGCATTCCAGATAACTTTTTTATTTTTTATCACCACCTTGAATTTTTCTAATAGAATATTTTTATTTTAGATGTTTATTGAATTAATTTATATAAATATGATAAAATTAAAATAAGGTTTTTTTAACATTTTATTTATGTCAAATATCTAAAAAAAAATAATCATTTACATTTTAATAAAATTATACTATTATTAAAAGAAAATTCAAAACGAAAGTGAGGCGAAGAAATATATTTAGAAAGGGTATAGGAAGGTATTTAGAAAATAAAGAGGAAAATAATTTTATTTGAAAATCTGTCGACCTCAACTAATCAAATAAACACCTAAGATAGACAGATTCTAAAAATGGCTAATAATAATAAAAATTTTCTTATGTAAATTTTGTTAAAGATTGAATGTGTGGTTTTTTATCAGTTAGACAGATTATAAGGTTATAAATGAGAAATAATAGGCATTTAAATTTGGCGC # Right flank : GAAACCGATGGTTTCATAACGGGATTGAAAATCCCTTTGGTAGGGAGATTTAAAGAACAAAATCTCGACGGTGCAAGCATCTTTAGCACGAATCAAAGATTCTTTAGCAAGTACAAGAAATGTATTTAGCCAAAGGAGTGAAACTCCGTGCTAAAGTGAAGTGAAACGAAACGTCATGAAAGATGCAGTATATCTTTCATATTCATCGTATGCCTTAGCATAAAATTCATCAGTGTGATTACATACGTATTAATCAATATGACGGATTTACCGTCATTAAATCAATAGTTTGATATTTTCGTTTGGGGTTAAAGATCATATGATATACTTAATTATTAAATGAATAATTTATAATAATCAAATTATATAGGACTTGAAATATAAATTAAGAAGTATTTATAGCAATTTGTTTTGAAAATATTTTTATTTTTTTATGTATATAAGTTTTATAGTTTTTATTGTCAATACTTTTATTGAAGTTATAATTTTTATTTTTCTTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAATAATCAAACCATATTGGAATATAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 136544-132863 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGGI01000008.1 Oceanotoga teriensis strain DSM 24906 Ga0215701_108, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 136543 29 100.0 37 ............................. GCACTCTAACTATTCAAGTTGTCCTTGTAAGGATCCT 136477 29 100.0 38 ............................. GCTTTTATTATACCACAAGGAGGCAAAAAAATGGTATC 136410 29 100.0 38 ............................. GGAGGGTTATACAGAAACTTGGCAGCCTTACGAAAAAG 136343 29 100.0 37 ............................. GATAAAAACAGCAAAAGAAGCAGCTAACTCAAGAGTT 136277 29 100.0 38 ............................. GGAATTTAGAAATATTTTCTTTTTTAATTTATCCGGTA 136210 29 100.0 37 ............................. GTTTATTCATTGAAATGTTTGACATTGGTTATCCTCC 136144 29 100.0 37 ............................. GAGAGAATTTGATATATAGCGAAGCGAAGGAGTGATA 136078 29 100.0 37 ............................. GGAGAATATTATACAATTTAGTTGTAAAGGATAATAA 136012 29 100.0 37 ............................. GTCTAAAAATGAGTTGTGATAAAAATACAGAAACAGA 135946 29 100.0 38 ............................. GGGATCAAAAATTTTGTACCGGTTATTGAAGAAACAGA 135879 29 100.0 37 ............................. GACATATCTACACTAGAACAAACAGCAAATTCAATTC 135813 29 100.0 37 ............................. GCTACTGTTGCATTTGGACTTTCCGGAAGGTCGTTCA 135747 29 100.0 38 ............................. GCTTTCCAAAAGTCTGATAAATAAACCACTCTTTAGGT 135680 29 100.0 37 ............................. GAAATGTATATTATTTAATATTGTTGTTGGAGAACTA 135614 29 100.0 38 ............................. GGTTTCAGGATCAATTTTAACTTTTTTTACTGGTTTAA 135547 29 100.0 38 ............................. GGGAAATGGCTCAACCTTTTGATAAAGATACGATTGAA 135480 29 100.0 37 ............................. GATATACGAAAAAGCAACTTTGAAATTATATAGAGTA 135414 29 100.0 37 ............................. GTTTTTCTGGATAATTCTTACAAAGAATTATTAAACT 135348 29 100.0 37 ............................. GCTATCATTCCACACAGATCCCGGAATAGCTGGATCT 135282 29 100.0 37 ............................. GAAATATTCCTTGTAAACTCCAATTTCTTGCGGAAGT 135216 29 100.0 37 ............................. GGGTAGTGAAAATTGATTAGAAATTGTAAAAGAACTA 135150 29 100.0 37 ............................. GTTATTAGAAAATACAATTAAAAATATGAAAAATAAT 135084 29 100.0 37 ............................. GCCATTTCCAGGGTTAGATGTTGAAAAACCAGTGTTT 135018 29 100.0 37 ............................. GTCAAAATAGTTATTTAGTATGTCAATATTTTTTACA 134952 29 100.0 37 ............................. GAATTGTTAGCTGTTAAAGGAATAGTGGCATTTGCAT 134886 29 100.0 37 ............................. GGATTTTAACCCAAAAATGTTTTTTAAACTGGTTGTT 134820 29 100.0 36 ............................. GTATTATAATAATAACTTTCTAAAATTTTGGCATCG 134755 29 100.0 38 ............................. GAATAATTTTTAAATCATATGGATACAATTCTTTAGTA 134688 29 100.0 38 ............................. CGGAAGACAAGAAGCATTTGCATTACCAGACAAAATGA 134621 29 100.0 38 ............................. CCTGTTTAAACCTCCGCTTTTGCTTGAAGCTTGTGTTA 134554 29 100.0 37 ............................. CGAGTCTATCTTCTTTTGAGTTTCTTTTATATTTTTG 134488 29 100.0 37 ............................. CAGTAATATGAGTGCTTTCATGATATATGATAATAAT 134422 29 100.0 37 ............................. CTTCTTTTGCTAAAAGTTTTAAGGGTAAAGTTTATTT 134356 29 100.0 38 ............................. CTGTCTATAACGAATATAATTTTTTCCCATTCCATCTA 134289 29 100.0 39 ............................. CGCATTACAAACGTTAGCAGTTGCACAGTACGGTACAAA 134221 29 100.0 37 ............................. CTATGTTAGTATGAATGTTCTATATTTGTCAGAAAGT 134155 29 100.0 37 ............................. CTATACACTGCCTTCCTGTTAGGTAAGGTCTTATATG 134089 29 100.0 38 ............................. CTTTGCATTTTTATATGTTGCAACAGAATGACTTGCAA 134022 29 100.0 38 ............................. CTCTTTCATGTTTATTTCTTGACCTTTCATTTCTTCAA 133955 29 100.0 38 ............................. CAAAAATTCTAACGCAATATCAAATGCTCTAGGATACA 133888 29 100.0 38 ............................. CATTTGTATGTACTGGAGTTTTCCCCAGTCATACGTTA 133821 29 100.0 37 ............................. CTTTTAAAAACATATATTTTTTTTGAGGATTTCTTTG 133755 29 100.0 38 ............................. CGCATTTTTATATCGAGGATTTCCCCCGATTTTTTTAA 133688 29 100.0 38 ............................. CAACAGTATTACTGCCTTACATATTTTAGGCTTTTCAT 133621 29 100.0 38 ............................. CTAAAGATTAGCATAAAATTCACCAGTTTTTATATATA 133554 29 100.0 36 ............................. CTCCAACCCCCAACAATCTTTCTCTTAACTCTGCTT 133489 29 100.0 39 ............................. CAGTACTCGAAAACGCTCAAATCAACGGAAACGCCAGGG 133421 29 100.0 39 ............................. CGTAGAAGGAAAACAAAGAATAGGGGCAACATTATTAAA 133353 29 100.0 37 ............................. CGAGAATCAAGTGAAGATAACATATATTGATGTTTTG 133287 29 96.6 37 ............A................ CTCGGTTATGGTGGATATTAAATATCCGAATCCAGCT 133221 29 100.0 37 ............................. CAAAAAATATAATCCTGTTCCATATCCTTGTATCATG 133155 29 100.0 37 ............................. CGAGAATCAAGTGAAGATAACATATATTGATGTTTTG 133089 29 100.0 37 ............................. CTCGGTTATGGTGGATATTAAATATCCGAATCCAGCT 133023 29 100.0 37 ............................. CTTGCTGTATTTAATATAAGTTCCGTTACTGTTATTA 132957 29 100.0 37 ............................. TATACTAGTACCAAGTGAATGTTTCGTTCGTTCTAAC 132891 29 86.2 0 .C.........T...............TT | ========== ====== ====== ====== ============================= ======================================= ================== 56 29 99.7 37 ATAATAATCAAACCATATTGGAATATAAA # Left flank : TATGATCCTTATTTAAATATCGTTGATAATAAAATGGAAGCAGAAAAATTATTTAGAGATAATACGAATATAAATGCTTTATTAGAAAAAGATTTTAAAGAAATAAACGAGGATTTTAAAACATTCAATAAAAAATATCTTTTTAATTCTATACCAATAAGTACAAGTTTTTATTTTAAAGCAAAATCTATTTATGGTATAAGACAGGATAAAATATTTAGAAAAAACGGTGTTTTTGTTTTAGATGATTCAATTGTTGAATATACTAAAGAAAAAGGATTAAAATTATTAAAAAATAAAGAAACAGATAATTTTATTTAAAAAATCTGTCGACCTCTACTAAGAAAATAAACACCTTAGATAGACAGATTCTAAAAACGACTAATAATAAAGAAAGTGTTGTTATGTAAACTTTGTTAAAGATTAAATGTATAGCTTTTTAGTAGGTCGACAGATTATAAAGTTATAATTAAGTGATAATATAGGTTTCAAATATACGG # Right flank : TTAAAAATTAAACAAAATTTATATCTTATTCTTAATGTATGATATTAAATGAATGTATTTGTTTAATATATAATATATAAGTATAAAAATTTAAAGGGGAGACTTTTCTTATGGATTTTGTTACAAGTGATGGTATAAAATTATATTATGAAAGAAAAGGCAATGGAATTCCATGCCTTTATCTTCATGGTGGGCCAGGTTATTGGAGTAAATCATTTCAACATTATGCAGGTAAATATTTAGAGAAAAATTTTGATATGATATATTTAGATCAAAGAGGTTGTGGGCGTTCGGAATATAGTTTAAGTAAAGAATATTCTTTAGAGAAAATTATCAATGATATTGAAGAGTTAAGAATATTTTTAGGAATTAAAGAATGGTATATAATTGGCCATTCATTTGGAGGCATACTTGCGGTAAATTATGCTTATTATTTTCCAAACAGGACTATAGGATTAATATTATCTAATGTTACATTATGTATGTACTATTCTTTTATG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAATAATCAAACCATATTGGAATATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 143164-144121 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGGI01000006.1 Oceanotoga teriensis strain DSM 24906 Ga0215701_106, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 143164 30 100.0 37 .............................. TTTATAATTTCTTCATTTTCTATATCTTCAGAATCGT 143231 30 100.0 36 .............................. GAAATATTCTTCGAGAACCTGTTCGCGGACCTCTTT 143297 30 100.0 38 .............................. ACAGAAATTCCCACCAAACTTCTGCCCACTTTAAACAT 143365 30 100.0 36 .............................. ATTTTGTTATTTTCTTTTTCAGTTCCCATTAAATCA 143431 30 100.0 36 .............................. TTGAATATATTAGGTTTCCAATTATTCAATTTATAT 143497 30 100.0 36 .............................. TTAACAGTTGCTACTGTTATAGTTAAAAATAAAAAT 143563 30 100.0 36 .............................. TGATTTGAAATATTCTTTTTTCTCCCATTTTATCCA 143629 30 100.0 36 .............................. TTTGAATATCTATTATTACCTTTTTTATCTTGCCAT 143695 30 100.0 36 .............................. ACTGTTTGCTTAAAGTAATCTATATGATTACTGTTG 143761 30 100.0 36 .............................. CTTTTAACAAGTATAGAATTACCTAATAGTAAAAAA 143827 30 100.0 36 .............................. TTCTTGCGAAAGGTTTCTTAAGCTTTCTATAAAACC 143893 30 100.0 37 .............................. GAAAAACCTGAACCATTAATAATAATATTATATATAA 143960 30 96.7 36 ......A....................... AAATGTTCGGTTATGGTGACGGATCCTTTTGTTTTT 144026 30 100.0 36 .............................. TTCTCGGACAATTGAACTTGCCCATATTTTTTAATT 144092 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 15 30 99.8 36 CTCTAACAATAACAAGAATTGTATTTAAAT # Left flank : TGACAAAAAAATTACACGTAGATCATTACCTAAGATTGATTCTATGCTTGAATGGGGAATTGTTAAAGAAGGAGATGTAATAATAGCTAAAGATAGAGGAAATGAAGCAACTCTTCTTTCTAATGGTAATGTAATGGTAGATGAAAAAGAAAAATCTATGCAAGCTTGGTTAAAAAAAATATTTGATTGGTCTACTATTAATACTTATATTTTTGCAGTTCATAAAGAAACAGGAAAAACATTATATCAACTTAGAGAAGAATATATGTCACAAAAAGAAATAAATGATATATAAAAAATAAGTGATTTGATAAAAATCGCTTCTTTTTTCCAAGTGATTGAAGTTGAAAAACTGGTAGAAATAGTATATAATAATAATTAGGAAAGAAAAAAGGAAGAAATTTTAATTGAGATGAAATCGCTGGAACTAAAATCAGTAAATGTAGTGATAATAAGTGTTTTAGCATATTGATGATTTCTGGAATCCTTAATTCATGACT # Right flank : TAAAATAAAAACTTCCAAATTTATTTGGAAGTTTTTTTTATAAAAAATTACATAAAAATTATTGATAAAAAAATAACATATAATTTTAAAATAATTATTATAAATGATATAATTAAAAATATAAAGTAAACAAATATTAATGAAACAAAAATAAAAGAGGTGAAATTTTATCATGAATAAGTTTACTGTTGAATTAGAGACTATAACTCCTATGTTTTCATATGGAAGCGATAAATATAAACCGGAGTTTAGAGTCACTGAATTAAAATCATTAATGAGAAACACATTTAGAGAATTTTATGATTTTAAAAATTTAAAAGAAATGAAGGAAAAAGAAGCAGAACTTTTTGGAGATTTAAATAAAAAAAGTCCTTTTAGTATTAAAGTAAGTGATCCAAAAAAAATAAATTTTAATAAATTAGATTTACCTCTTTTTAAAATTCTAACTCCACATAAAATATTAAATCAAGAAAATATTGATGCTAAAAATATTTATAATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTAACAATAACAAGAATTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 152986-153880 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGGI01000006.1 Oceanotoga teriensis strain DSM 24906 Ga0215701_106, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 152986 30 100.0 36 .............................. ATAGCAGAGTCTCTGAAATTTTCTTCTTGATTTTTT 153052 30 100.0 36 .............................. ATTTCCAATTTAAATAATTTTTAAATTTATCTATAT 153118 30 100.0 36 .............................. GCTATATCTTCCATAACTACTCTATAGTCATGATTT 153184 30 100.0 36 .............................. TTAAGACAGGGTAACGCTTATTGATATAGACCTACT 153250 30 100.0 36 .............................. AATTCTTGATCATCATGTTTTATTTTCCATGTTCCT 153316 30 100.0 36 .............................. AAAGACAAAATATATATTTTTATTTGAAAAAAAGAG 153382 30 100.0 37 .............................. AAAGAAAGTATAACCGAATATTTCAATAATATAGCTA 153449 30 100.0 38 .............................. TATAATTTCATTCTAATGATGTCTTTAGACTGACCCAA 153517 30 100.0 38 .............................. TATAATTTCATTCTAATGATGTCTTTAGACTGACCCAA 153585 30 100.0 38 .............................. TATAATTTCATTCTAATGATGTCTTTAGACTGACCCAA 153653 30 100.0 36 .............................. ATATTTTCCTCTTTTGATTTGAAATATTCTTTTTTC 153719 30 100.0 36 .............................. TATAAACATAGGACCTCTTGAACTAAATCCTCCCAT 153785 30 100.0 36 .............................. TCTTCATAATATTTAACTATAAAATCACGTACAATT 153851 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 14 30 100.0 37 CTCTAACAATAACAAGAATTGTATTTAAAT # Left flank : ATTTTAAAAATGAAAATGATTTTCCAAGAGATGATGAAGATCCAAAAATAATAAAATTTTTAGTTGTAAAAGGTGGGAATTTTAAAATAAATATAGGAGTTAGAAATGAATATAAAGAATTAAAAATTAAAATTGATGAAAACACAGGTATAAAAAATAATAAAGAAGAATTAGATAAAAAAACATATGAAGAATTTATCAAAAATGAAATAAAAGAAGCATTAGAATTCAATGGAATAGGTGCTAAAACATCTGTTGGATATGGATTTTTTTCATTTGACTAAAAAGAAGATTTAAATCTTCTTTTTGGTTTTTTATAATAAAAAATTTCCAGGTGATGGAAGTTGAAAAATTGATAGAAATATTATATAATGGTAATTAAGAAAGAAAAAAGGAAGAAATTTTAATTGAGATGAAATCGCTGGAACTAAAATCAGTAAATGTAGTGATAATAAGTGTTTTAGCATATTGATGATTTCTAGAATCCTTTATTCATGACT # Right flank : CATTTTGCACCTCCAAAATAATTTTTGTATAGTATCTTTCTAAATTCTAAAAACGTTTATTTAAAGTAATTTTAAACGATGTTAAAAGGGATATTTACCTCCATAGGTTATAATTAAATTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTAACAATAACAAGAATTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //