Array 1 6499-2980 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRSH01000020.1 Halorhodospira neutriphila strain DSM 15116 scaffold0020, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6498 28 100.0 32 ............................ GGAGAGCTAGACGTCGCCGTGCAGGGCTTCCT 6438 28 100.0 32 ............................ ATACATAAGATGCGGGTATATCGAGCCTGTCA 6378 28 100.0 32 ............................ TCGCCAACATCCGCAGCACCGACGTAGCCGCC 6318 28 100.0 32 ............................ AGCCGGTATCCGCCAGCGGCGCGGCGGCCAGA 6258 28 100.0 32 ............................ ATGGTGCTGTCTCCTATGCGATCCGATGCCAT 6198 28 100.0 32 ............................ AATCAAAAAACGATTTGATAACACCTACAATG 6138 28 100.0 32 ............................ ATAGCTCAAACCTCCCTCAGCGACGACGAATT 6078 28 100.0 32 ............................ TCGTAGCTCAGAGGGTGCAGCGCCAAGCCGTG 6018 28 100.0 32 ............................ AGCTCGACGACGGAGAAGAGCCGGACGGCGAC 5958 28 100.0 32 ............................ CTCAACCTGCTCGCCGGTCTTGGTCGCCCAAT 5898 28 100.0 32 ............................ TGGGGTCCTACGAGCACCTCATCCACACCTCC 5838 28 100.0 32 ............................ TTAGACGCGGAGTGGTTGCCGGTGACTGTGAT 5778 28 100.0 32 ............................ TGTACGACTTCCTGATGCTCGCCGAGCAGGTG 5718 28 100.0 33 ............................ CAGCAACAGCAGCAGCGCAGCGCCGATCATGGC 5657 28 100.0 32 ............................ ACCATCCTGGCGATCAAGCACGGCCACACCTG 5597 28 100.0 33 ............................ AGGAGCGCCCGGACACGGACCAGGGCGAGCACC 5536 28 100.0 32 ............................ TCGCTCCTGCGTCAGATACCCCTGCTCCACGG 5476 28 100.0 32 ............................ GCCTCCCCCATCGCCCGCTGGCACAGCCGCTG 5416 28 100.0 33 ............................ TGGTCGAGTGGCGCCACGCGCTCGACCAGGTCC 5355 28 100.0 32 ............................ CTCGCCGGCGAGCTCGGCATCACCGTTGTGCT 5295 28 100.0 32 ............................ TTGCGCCACCGGCAGCCGGTGCGGATGCTGAG 5235 28 100.0 33 ............................ GCGGTATGAAGACCACCTCGTGCACGTCATCCT 5174 28 100.0 33 ............................ CGAGACGGTTATCCGTCATCGTCTCCTCCGTCA 5113 28 100.0 32 ............................ CAAACCCCGTCATCACCCACAAAGACGCTACG 5053 28 100.0 32 ............................ GTTGTGCCGTACGGCGTCGTACTCGAGGTAGT 4993 28 100.0 32 ............................ ACTCCGCAACCGAAGAAGCCACATCCGATTGA 4933 28 100.0 32 ............................ TGATGGACCTGGCCTGCGAAGACCTGGTCGAG 4873 28 100.0 32 ............................ TGGGCGCGCTGCCGGACTTGGTCGCTGAGATC 4813 28 100.0 33 ............................ GATAGCGCGATTCACGACGATGCGCTGCACGCC 4752 28 100.0 32 ............................ GTACCTGCTGAGGCCACCCCTCGCGCCTCACC 4692 28 100.0 32 ............................ TGACGGAGGTAGCAAGCATTACCGGCCACAAA 4632 28 100.0 33 ............................ ACGATCCTCAAGAGCGGGATTGCAGGGGAAGGC 4571 28 100.0 32 ............................ ATCTGCCCGAGACGAAGGCCGGCGAAGCCCGC 4511 28 100.0 32 ............................ GCAGCCGCCGAGGAGCCCGCCAAGAAGTCCTC 4451 28 100.0 32 ............................ AGTAGAGCTGGTGCGCCGTCAGCCCGTACGCA 4391 28 100.0 33 ............................ TGTGCTTCTGGATGACCTTCGACGTGGACCGCT 4330 28 100.0 33 ............................ CCGAGCCGATGCCCTTCCGGGCGCCCGGGTTCG 4269 28 100.0 32 ............................ TTGTGGGTTCCCTGAGCCTACCACCCCTCGAC 4209 28 100.0 33 ............................ GAGAGCAGCCACGCCGCGGAGCGCGAGGTCACC 4148 28 100.0 32 ............................ TCCTGGTCCAGCTTGAACGCCGGGCACCGCCG 4088 28 100.0 32 ............................ CGCAATGACTGACTACCGCTATCGCGTCGTCC 4028 28 100.0 32 ............................ TGGGACGACACGACCGCGCTCGCTCAGCAGGT 3968 28 100.0 32 ............................ TCGAAGCTGAGGGCATCATCCGAGTCGTTGAG 3908 28 100.0 32 ............................ TCAAGGGCCCGATGGTCGAGGAGCAGGAGCAG 3848 28 100.0 32 ............................ GGCTCGAGGTCGAGCGCCGGGCCGTTGCCCGG 3788 28 100.0 32 ............................ ACTTCGGCGACGCCGCCAGGTCTTCTTCGAGC 3728 28 100.0 32 ............................ ATGTCGACGGCGTGGCTGCCTACGGTGCGGAT 3668 28 100.0 33 ............................ AATATACCTCTTCAAAACCTCCCTTCTGACTAC 3607 28 100.0 32 ............................ TCGTCGAGTTCCGGCCAGTAGTCCTCGGCAAC 3547 28 100.0 32 ............................ TACCGATTCAGCCCACGCTCGCCGCGGTGGAG 3487 28 100.0 31 ............................ AACACATCAAGAGTTCCCCTTTTCGGGAGGG 3428 28 100.0 33 ............................ ATGCTTTGAGCTGCTCCGGCGTCACTAGCGTCC 3367 28 100.0 32 ............................ ACGAGGGGCTCGGCGGCCGCACGCCGTTCGAG 3307 28 100.0 32 ............................ TTTATCGGCTCCGACGAGGCCTACCTCGTTCC 3247 28 100.0 32 ............................ TCGGTGTTGAGGGTGATCTTGGGCAGCTGGAC 3187 28 100.0 32 ............................ TGGGGCGCTGACGGGCATCTCTATAGCGCCTC 3127 28 96.4 32 ....................A....... TGCGGCGCGAGCGCGTCCCCCGTTGTGTGGTG 3067 28 100.0 32 ............................ GGTTCAGCCCTGCGGGCGCGGGGAACGCGCTT 3007 28 92.9 0 T...................A....... | ========== ====== ====== ====== ============================ ================================= ================== 59 28 99.8 32 GTTTGCTGCCGCGGAGGCAGCTTAGAAA # Left flank : CTGACCAACCGCTCTGTCGAGACGCTGGAGCAGGCGGCGGAGCTGATCGAGTGGTATCGGGCCCGCTGGGAGATCGAGATGCTCTTCGGCGTGCTCAAGGAGGCCTGCCAGGTCGAGGCGCTGCAGCTGGGCCATATCGAGCGCCTGGAGCGCGCCCTGGTGCTGTTTCTGATCATCAGCTGGCGCATCGATCGGCTCATGCGCCTCGGTCGCCAGGTGCCGGAGTTCCAGGCCGAGCTGATGCTCGAGCCCGAGGAGTGGCAGGCCGCCTACCTGCTGGCCAAGAAGCCTGTCCCGGACTCGCCACCCCGACTCAACGACGTCCTACGTCTGATCGCCGGGCTCGGGGGCTTCCTCGGGCGCAAGAGCGACGGCGAGCCCGGCGTCAAAACGGTCTGGCGAGGCCTGCTACGCGTCATGGATTTCGCCGACGGGGTCAAGTACGCCAAGCAGGCTCAGGGCAACTGAGATGTGTGTAAGGGGATGGGCATCAAGACCCT # Right flank : AGGACATCGGGAGCGCATCCCGCTCCTCTCTGTTTTTGCCGCTGTGGAGGTGGTTTCTAGATTCATGTGTGCTATTCGCATGCTACGGGGATGGCTCTGAATGAAGGCGGCTACCGGCAACGTCGTCTATGGTGTATTCTAGAGTTATATTTATCAGGGAGTGTTCGTGCCGCCCATCCTAACTCACTGATATCGCCCGGGTTATTCCCTGCAGGTAGATGAGGTAAGAGGCCATGGACAAAGCCCACAAGACCGAGGCGCAGTGGCGCCAGGAGCTGACCTCGGAGCAGTTCGCCGTCGCCCGCGAGGGCAAGACGGAGAGGCCCTTCAGCGGCGCCTACTACGCCTGCCACCAGTCCGGGACCTACCGCTGCGTCTGCTGCGGCGCCCTGCTGTTCACCTCGCGCACCAAGTACGACTCCGGCAGCGGCTGGCCGAGCTTCTGGGCGCCGGTGGACGCCGACCGGCTCACAATTCGCGAGGACCGCTCCATGGGCATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTGCCGCGGAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 8544-8034 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRSH01000020.1 Halorhodospira neutriphila strain DSM 15116 scaffold0020, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8543 28 100.0 32 ............................ TGCTGGCCGTCAATGGTCAGCTCGTAGTAGCG 8483 28 100.0 32 ............................ ACGAATGCGGACGCCGACGCGCCGGACCCGCC 8423 28 100.0 32 ............................ AGCTGCTCAAGCCGGCGCTCGGCCACCTCTGC 8363 28 100.0 33 ............................ GGGCTGGGGCAGCTCTCCGCGCCTCACCATTCC 8302 28 100.0 32 ............................ GCGAGGCCGGCTGGTCGGAGGAGGCCGTGCAG 8242 28 100.0 32 ............................ GTCTGCCCGAGATGCCACGTCCGCGCCCTGGT 8182 28 100.0 33 ............................ CTGCTGCGCAGCCATGCGCTGCGCGGCCTGCTC 8121 28 100.0 32 ............................ TCGTCCTCTTCACGCGCTTCCACACCACCAAG 8061 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 9 28 100.0 32 GTTTGCTGCCGCGGAGGCAGCTTAGAAA # Left flank : CCGGCTACAGGCTTTGATGGAGATCCAGTGGCTTAAAGGAATGCGGGATCATGTAACGCTTGATGGCATCAAGCCGGTCCCGGCGGATGTTACCCATCGCGTGGTACGGCGACGGCAGTACAAAACCAATCCAGAGCGTCTCCGCCGGCGCCGGATGAGGCGCCACAACGAGAGCTACGAAGAAGCCGCCCGACGTATTCCAGACGCTGTTGAGCGCCAGGTGACAACGCCCTACGTTGTAGTGCGGAGCCGAAGCTCAGGGCAAGCTTTCGCCCTCTTTATCGAGCATGGCGATTGCCAGGATGCGCCGGTGACTGGCGTCTTCAGTACCTATGGGCTTAGCAAGGAAGCGACCGTGCCCTGGTTCTGACCCTTTTTGAAGAACCCTCTGTGCACCCTTCTTAATCAAGAAGTTATGACTCTTCTGGTTAAGAGGGGGTCACGAGGGGTGCAGAGGATTAGTTCTTTAAAAATCAGCAAGATAAGTGCCAGTCTCTCTA # Right flank : TTCGGCGCCGCCTGGCAGGGCATCAAGCATCCCCTTACACACAAGTCGGCCAGGAGCTGCTCGCTGAGCGATGAGCGATCGGCCTCGATGCGCTCTGTTGCCTACTGATGAGCCCGCGGTCGCGCCCGCGTATGGCAGCATGGCGCCTTCCTTGGCCATGTGGACGTGGAGGCGGCGATGAGCTGGGCGGCACTGGAGCTCGAAGAGGTGGACCTGGGCGATCAGCGCCGGAATCGGCGGCTGATCCAGCTCGTCGAGCGCCTGGCTGATAATCCGACGGCGAGCATCCCTCAGGCCTGTGAGGGCTGGTCAGAGACCCAGGCTGCCTACCGCCTGCTGCGGGGCGAGGGCTACGACGAGCAGGATCTGCTCGAGCCGCACCGCCAGCGCACGCAACAGCGCATGGCGACCCATCCGGTCGTGCTGTGCCTGCAGGACACCACGGAGCTGGACTTCAACGGCCAGCAGAGCGAGGGCCTGGGGCCGCTGAGCTACGAGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTGCCGCGGAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 33510-32965 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRSH01000003.1 Halorhodospira neutriphila strain DSM 15116 scaffold0003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 33509 37 97.3 37 ................G.................... TGGCAAGAGGAGTACCAGCTTGAGCCGCCGCCAGGCT 33435 37 97.3 36 ..........................A.......... CATCGCGCCGGGTTGTCGCCCTCGCGGTAGCCGCTG 33362 37 97.3 34 ..........................A.......... GATGTCCTCGTCGTCCATTCCGGCGAGGTCGCCG 33291 37 100.0 36 ..................................... TAGATGGTCGCCATGAGGCAAGGGTGCCACCGCCGC 33218 37 94.6 36 ...............A.G................... GGGACGATCCCGGAGGCGATCACCGAGTCGACGATC 33145 37 100.0 35 ..................................... ATCGACAACACCGGCTCCGAGCAGCCCTTCGTCCA 33073 37 91.9 35 ..............TA.G................... ACGATCTACAAGTCCAACCTGCTAGCCACCGAGGA 33001 37 86.5 0 ............G..AG.........AT......... | ========== ====== ====== ====== ===================================== ===================================== ================== 8 37 95.6 36 GGCTCATCCCCAACGGCAGTTGGGGTTCCGTTGAAGC # Left flank : ATAGGGGGATGCGCCAGTGAGGCGCTCAAAGTAGGGGATCGCCTGCGCCATATCCGTGCGGTGAAAGCGGTATCCGTACCCGTCGCGTGCCGTGGGCCCTGATAACGAGGTGGGCAACAGCGCTTGGCGCCTTGCTACACCCGGCCCTTATGCCACTAAGCCAGATTCTCCCCCCTCTGTCGAGAGGGGGGATTCCAGAGACTCTGATCTTCTTCCGGTCGAGGGGGAAAGGCCAAGCAGAAGGGGCGGGTCATCTAGCGGATGACGTCTTGACCGGATCGCTGCAGCGCCGCTCAATGGAAGGTCTCGGCAGAGGGCAGCGCGTGCGAAGGGGGAGCGACCAGGCTCACCCGGGGAGGTTCGCACTTGGGGTATATTTATAAAAATCAGCGGGTTATGTTTCGGCGCGGAGGTGTAAGTCTGCGCGGCACGGCGCGAGGAGAAGGGTTCGCGCAGAGCTCCGAAAGAAGCGTTGTCCCTCCGGTAGATATAAGGCGGCC # Right flank : GGGCCGCAGACCGCTGAGGCCGTCGCTAGTCCCCCGGCTCATCCCCAACGAAGGTCGGGGCCTTCTTCTCCGTCCCTGGCGAGCTACGCCCGCTCCTCCGATACACCCGCCGCAGCACCAGCAGCAGCTCCAGGCAGTCCTCCTGGCGGACATCGGACGGCAGCTCCAGGGCGAGCAGCCGCTGCCACTCCACCGGCTGGATATCGAGCTCCTCGCATAGCGCCGGGCTGGCGGCGATCTCGCGCAGCCCGCGCGGGGTATCAGGCCCCGTAGGCGGTACGTATTCCGCCTGCGAGGAGCTGCCAGCTGCCTCCCCGTCCTCCTCGCCGTAGAGGTAGGAGAGGGTGGTGCCGAGCTCGCAGGCGATGGCCTGCATGGCCTTTGTCGAGAGGCTGCGCCCGGTGCGCTCGGCCCGCGACAGCTGCGCCTGCTGGACGCCAGCGCGCTCGGCGAGCTCGCGCTGGGTGAGCCGGGCCTTCTGGCGGAGCTTGCGGAGGCGG # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCCAACGGCAGTTGGGGTTCCGTTGAAGC # Alternate repeat : GGCTCATCCCCAACGGCAGTTGGGGTACCGTTGAAGC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.00,-12.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 39727-40126 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRSH01000003.1 Halorhodospira neutriphila strain DSM 15116 scaffold0003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 39727 37 97.3 35 T.................................... AGGATGCGGTTGGCCTTGGCGTGGCCGGTGGTGTC 39799 37 97.3 36 ..................................A.. GATCAGCTGGCGCAGGATGCCGTGGTCGATGCTCGG 39872 37 100.0 36 ..................................... CTCCCCGGCTTGGTTGAGCTTCAACCGGGTTCCGGG 39945 37 100.0 36 ..................................... GGCAGCGACCACGCCGGGCGTGCGCCGCTTCATCAA 40018 37 100.0 35 ..................................... AGCCGGCGCGGCATGTCCTCGGGTAGATGCTGCCC 40090 37 89.2 0 ..........A........TCC............... | ========== ====== ====== ====== ===================================== ==================================== ================== 6 37 97.3 36 GCTTCAACGGTACCCCAACCGTCGTTGGGGATGAGCC # Left flank : GCTCTTGCGCCTGACGGCCGCCGAGCTCATCGACCGCGACCGTCGTAGCGAGGCCAAGGGCCTCCTCACGCCCGTACCCCGGCTTTCCGACGACAAGCTGCTGTGGCGCTTCCTGGAGAAGAGCACAAGCTGGACGGCGGCCTCGCCGGTGGTCCTGCCGGGTTTCGATACCCGCCGGGGGAAGCCCCGGCCCGCCAAGGCGGCGCGGCGCCTGCTGCGCTACGCCGGGATCCCCGAGGAGGCAGTTCGGCGGATCCACCTGAACAAGGCCCCCAGCATCCCCGGGGTCTGCTCTACCGGGGGCGTGGAAGTCCCGCACTACCTGAGCAGCTACCCGCGCCTCTTCCCGACGCTCGAGTTCCACCAGCCCGTAACAGGCCCGCTTCTGCTCGGTGCTGGCGCGGGAGCCGGGCTGGGGTTACTCACGCACGGCTGAAAGGACCCCAACCTTCGTTGGGGAGAGCTTCCAGCTGCCAACGGTAGGGCTGGTGGACGACCAT # Right flank : CGGCCGCCTTATATCTACCGGAGGGACAACGCTTCTTTCGGAGCTCTGAGCGAACCCTTCTCCTCGCCCTGTGCTGCGCGGGCTTACGCCCCCGTGCCAAAACACAAGCCACTGATTTTCAAAGAGAGTTCCCAAGTGCGAACCTCCCCGGGTGAGCCTGGTCGCTCCCCCTTCGCACGCACCACTTCTCATTGGGCGGCGTCGCTGGGATTCCGTCAAGCTGAGCTCAGCTGGCGGATTCCATCCCCCATGCCTGTACTGGCCCATCACTCCCGCGTCCTCCACTCCGCGGCAGGGGCCTCCTGGGCCGCGAGCACCGCGGTCCTGAAAAGCGGATCCGCCGAGTGCTCGGTATAGCCGCGGCGCAACCGAGCGCGGTAGTAATGCGCCACGCGGCGCTGGGCGCTCTCGAGATCGGCAAAGACCTCAACGCGGTATTGCCCTCTGCCCCGGCTCCCAATTCGCCCCCAGCGGCGCACTAGCCGGATGGGGGCGAAGAG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAACGGTACCCCAACCGTCGTTGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.70,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //