Array 1 226631-228365 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUBC01000001.1 Klebsiella pneumoniae strain 199D1 contig_0003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 226631 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 226692 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 226753 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 226814 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 226876 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 226937 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 226998 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 227059 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 227120 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 227181 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 227242 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 227303 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 227364 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 227425 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 227486 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 227547 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 227608 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 227669 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 227730 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 227791 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 227852 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 227913 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 227974 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 228035 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 228096 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 228157 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 228218 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 228279 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 228337 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //