Array 1 137398-142125 **** Predicted by CRISPRDetect 2.4 *** >NZ_PINZ01000004.1 Halomonas sp. 141 NODE_4_length_145187_cov_30.8028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 137398 29 100.0 32 ............................. GAAAACCGCCCTCCGTAGCGGCCAATTTTCGC 137459 29 100.0 32 ............................. CCCGCGACGCTGGCCTGGCCCGCGTGGTGGAT 137520 29 100.0 32 ............................. ATCGCCTACATGGCGTTCGGCGACGGCGGGCA 137581 29 100.0 32 ............................. GGGTTGTTCAAATCGTTTATTCAGGGCGGCTA 137642 29 100.0 32 ............................. ATAACCGGCTACCAGCGCCCAGCCGACGCCGC 137703 29 100.0 32 ............................. TAAAAGGTTCCATGTCAACCTCCCAAGTGGAA 137764 29 100.0 32 ............................. ACATGCCCGAACAGGCACGCCAGTGGCACGAC 137825 29 100.0 32 ............................. CGCTGGCCGATATTGGGCGCGTGTCACTCAGC 137886 29 100.0 32 ............................. GGCGATTCTGGCGGCCAATGAAGCGGGCGGCA 137947 29 100.0 32 ............................. CGCGCGGGCACTTCGCCCGCAATGACGTTGCC 138008 29 100.0 32 ............................. GCTACCAGAGCCTGCAGGGGGATCTATCAGCG 138069 29 100.0 32 ............................. TGCTACCCGACCAGCCACCTGGCCAGTACGGC 138130 29 100.0 32 ............................. CGACGGTGCCCCCCAAACACGATCAGGCCTAG 138191 29 100.0 32 ............................. CGCGTAGAACGCGCCACCGCCGGCTCTGGCAT 138252 29 100.0 32 ............................. GCTGTGGGTAACCGCCTTCCGATAGGTGGGGA 138313 29 100.0 32 ............................. CCGCGGCCAGCATGTTCGACACACTGGGTGGC 138374 29 100.0 32 ............................. GCGACGATGATGAGTAATTTAGCCAGCGCCGC 138435 29 100.0 32 ............................. ACGTGGCCTACGCAGGCGGCACCATCTACTAC 138496 29 100.0 32 ............................. CGCCCCTGCTGGTCGGCGGCTTGCTTCTGGAT 138557 29 100.0 32 ............................. TTATCGGACATGAACACTTGCGTGTCGTTGAG 138618 29 100.0 32 ............................. CGATGAGGTTGTTCATTCGGGCCGTTCCTCTT 138679 29 100.0 32 ............................. CGCTCGACCAGGTCGGCTTGAGTGCAGTACGG 138740 29 100.0 32 ............................. GGGTCGCTACAGTGCCCTTAAGGGCATCCACG 138801 29 100.0 32 ............................. CGCTAGCTGAGGCCACAGATACGCTCCAGACT 138862 29 100.0 32 ............................. ATACGGCGACCCTAGTCATAGCTGCGAAGCAT 138923 29 100.0 32 ............................. CTGAATGTTTTTGAACCACATAGTATTTCTCC 138984 29 100.0 32 ............................. TGGCGGGTGCTAGCTGGGCGGTGATAGGTGGT 139045 29 100.0 32 ............................. ATAACCCGGTTGCCGATACCACGCTGATCCGC 139106 29 100.0 32 ............................. CGCCGGAACTCGCGACCACGCTTTGAAAGCAG 139167 29 100.0 32 ............................. TCACTGGATTGCCCGCTTCGGCTATGACTATC 139228 29 100.0 32 ............................. TCGTTTGTACTAGCGAACACAGTCACACAACG 139289 29 100.0 32 ............................. CTGTACACTTCAATATTCAGAGCAACTTGACG 139350 29 100.0 32 ............................. TACACGCCGCTGACGCCTGTGCTATTCGAGGA 139411 29 100.0 32 ............................. ACGAGCTACAGGCCATCGCCCGCGATGCCAGC 139472 29 100.0 32 ............................. CAGCCTAACCCTTCCCCCACCCCGGGGCCAAT 139533 29 100.0 32 ............................. CGACCAGTGCCTGGGTGAGCTTAACCAGCGGC 139594 29 100.0 32 ............................. TGATTCGGGGCCTCCACAGGCTAAATATTCCA 139655 29 100.0 32 ............................. CCGTCCGTCACCAGCTTGGCGAACTCGGCGGC 139716 29 100.0 32 ............................. CGCGGTTGACAGCTTTGCATCGCAAATTGCCG 139777 29 100.0 32 ............................. GATTACTTGATGGTTCAAAAAAGCCCGCATGT 139838 29 100.0 32 ............................. TAACAGGCTCGGGATCGCCAAACGTGAATGCC 139899 29 100.0 32 ............................. ATGAGGCGGTGCAGATCGAGGCCGAAATTCTC 139960 29 100.0 32 ............................. CTGGCCAGCATCCAATCATGGTCGTCGTGGGT 140021 29 100.0 32 ............................. CAGCATTAGATCTTCCTCGGTCAGGCGCCCAT 140082 29 100.0 32 ............................. TAACCCACAGCCTCACCGACAGCAGCTACACC 140143 29 100.0 32 ............................. GCCCTTTCCATCAACCAGCCATGTGTAAGAGA 140204 29 100.0 32 ............................. GCAGATCCGCACCCTCAGTACGAGATGCGCGT 140265 29 100.0 32 ............................. GCTTTAGCGAAATCATCGCCGCCCAGCACCAG 140326 29 100.0 33 ............................. TCTTCGGGCTTCGGTTGGCACAGCGCGGCAAAC 140388 29 100.0 32 ............................. CTCCGGCAGGACTACGCGGACTGGCTCAAACG 140449 29 100.0 32 ............................. CCCATAACACCCCTCAGCAGATCACCGAGTGG 140510 29 100.0 32 ............................. TTTAGCTGATCCTGAACTGTTATCTCGTTTTT 140571 29 100.0 32 ............................. CCCAAAAGAACGCCGCGTCCTGGCTCGCGAAG 140632 29 100.0 32 ............................. CGACAGCATCCGCGAAAGCGAGCTAGACCAAG 140693 29 100.0 32 ............................. ATCAAAGAGATCAACGACGCGTACAGCGGGCA 140754 29 100.0 32 ............................. ATGTAAAATTAAGTGATTTGAAATATAACTTA 140815 29 100.0 32 ............................. TCTACGCGGCCGCGACGAAGAAAGACCAGGCG 140876 29 100.0 32 ............................. TGGCTGTCAAATTGGCTGAGGCGTTCCCGGTA 140937 29 100.0 32 ............................. TAGCAAAACAGGATGAGAGCCAGTGTCAGCAT 140998 29 100.0 32 ............................. CCAGGCCTGTCGTGCTGTGCATTGACGCTTCG 141059 29 100.0 32 ............................. CATTATCGAGCGCTTCGGCCAACTGACTCAGT 141120 29 100.0 32 ............................. GTCCAGGCACTCGTCCTTCGTGACCTGGTACA 141181 29 100.0 32 ............................. GTCCAGGCACTCGTCCTTCGTGACCTGGTACA 141242 29 96.6 32 ............T................ CTGACGTGGAAGCCCTGGGTTACGCCTTCGGG 141303 29 100.0 32 ............................. GCCATCGAGCTGAACCGCCAACTGCAGCAGTT 141364 29 100.0 32 ............................. TCAGCAGTACCGCTGCTGTCACATTGCGAGTA 141425 29 100.0 32 ............................. GCCCTTGGCCACCGTGCGCGCCTGGATAACCA 141486 29 96.6 32 ............................C CGCCCTTGCTGTTCCCACCATGCAGTCAGGAC 141547 29 100.0 32 ............................. TTGCCATTGAGGCCGGGGTAACGCTGGAGAGT 141608 29 100.0 33 ............................. CGGCGCTGGCCGGTGGTGGGCGGGTGCCCGGTC 141670 29 100.0 32 ............................. TTAGCGAAGCTCGAGCGCACTACCCGTAGCAT 141731 29 100.0 32 ............................. GGTGGGTCAATGGGTTTACCTGCACTTGCCGC 141792 29 100.0 32 ............................. CGCGAAGGGCAAGTGGTTTATCGCATTCCAGG 141853 29 100.0 32 ............................. GCCATGCCGCTACCAGATACCAGTCCCCACAT 141914 29 100.0 32 ............................. CCAGCAAAGAGATCCGCAAGCAGGTCAAGCTC 141975 29 100.0 32 ............................. TGTACGATCAGGACCAGGTGGCCATGCGCGTG 142036 29 100.0 32 ............................. CTGTCGATGGGCGCCGCGAACCACGCCTCATC 142097 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 78 29 99.9 32 CCGATCCCCGCACGAGCGGGGATGAACCG # Left flank : GGCGAGATTCAGCCCCCACCTCCAGCACCTGATGCTGTGCCACCTGCAATTCCAGAACCACCGTCGGTCGGTGATGCCGGGCACAGGAGCGGATAAATGGCGATGCTCGTAGTGGTTACAGAAGCCGTGCCGCCACGCCTACGTGGCAGGTTAGCAGTGTGGCTTTTAGAGATTAGAGCCGGTGTTTATGTGGGTGATGTAAGCAGGCGCATTCGCGAAATGATCTGGGAGCAGGTCGAAGCGCTAGCTGAAGATGGCAACGTCGCCATGGCCTGGGCAAGCAACCATGAATCGGGGTTTGAATTTCAAACCTACGGTGAAAACCGCCGAGAGCCGGTTGATCATGACGGATTACGCTTGGTGCGCTTTTTACCGCCGCAAGTTAACTAGTTGATTTTATTTGATCTTTAATAATTTAAAGTGGTTAAAAAGTCAGCAAAATAGCTGGTAGAATTTTTATCTGCTATTTTCTTCTTGTAGATCAAATATCTACAACAAGT # Right flank : GGGCACCAGCATGGAGGGCGTGGGCATCTATGACCGATCTCCGCTTAGGATATAGTTCATGTGTGCGAAGCTTTGCAGTGAGAATCAGCTTTTTTACCTGTCGTTATTACATGGAGCCTAGCCGATATTTTGCTTACACTTCTTCAGGTAATGCGAGAGACCAATATTCGCCTGGTGTGCCCTGTGAAAACAGATGAGGCATTTGGGGATGGCGAGCCAACCTCGCATTACGCCTACTTCTTGGAAAGGTGCAGCTTTCCATCGAAGTGCATGGCTGGCTGACCGATGTAAGCTGACACCTTTTCTAAAGATCAAATGCACTAGCCTAGTGTGCTTAACCCCCCACCCCAACATGTCGCCCGAGCGGGGGCCGTGGTTACTCTTTTTCGTTCTCTTCTTCCTCTTCCCAGTGCTCCATGGCGCGTTTGTCGTCGGGTAGGCGGACGATGTCGCCGATGTCGATTTTCTGGTGTGATTTGAAGCGGTGGCCGTGTTCGTCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCACGAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGATCCCCGCACGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //