Array 1 66176-67963 **** Predicted by CRISPRDetect 2.4 *** >NZ_PXLK01000015.1 Klebsiella pneumoniae strain CRE12 NODE_15_length_142198_cov_37.8117, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 66176 29 100.0 32 ............................. AGCAACGTTTCCGGATTATATGGCTGGAACGT 66237 29 100.0 32 ............................. TAATTCAGGAAATGAATTCTAAAATCGACTCT 66298 28 89.7 32 .....-......CA............... GCCATGCAACGTCTGAACGTCCGAAACATCCC 66358 29 93.1 32 ............CT............... CGAATCCTCAGCGCGTGTCACGGTGACTGACC 66419 28 89.7 30 .............A..-T........... TTACTTTAAGTAGTGCATTTTTTTGTGTTT 66477 29 93.1 32 ............CT............... CCGACCCGGTGCCCAGGAGAACTGGCTGAATA 66538 29 93.1 31 ............C..A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 66598 29 89.7 32 ............CA............T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 66659 29 96.6 32 .............C............... GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT 66720 29 100.0 32 ............................. AATCGACATCTCGTCCGTGGATGCGAAAAACA 66781 29 100.0 32 ............................. TGACTTTTGCGCAGCCTCAGGGCTCCGGTTTG 66842 28 89.7 32 .....-......CA............... AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC 66902 29 93.1 32 ............CA............... GCACCCTCACGGATACCTTTTGCACAGTGTTA 66963 29 86.2 32 ......T.....CA..............C CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG 67024 29 100.0 32 ............................. TTACTTTTTGGCAGTTGGTAAAACACTTTTGC 67085 29 93.1 32 ............CT............... TGACTTTTTGGCAGTTGGTAAAACACTTTTGC 67146 29 93.1 32 ............CA............... TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA 67207 29 93.1 32 ............CA............... GAAAGTAGGGGCTACGCCGGAATTCCGAAGAG 67268 29 100.0 32 ............................. GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT 67329 29 100.0 32 ............................. TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA 67390 29 93.1 32 ............CT............... ATTCCGTTCATAATTTTGTAGCTGCCCGCTAT 67451 29 93.1 32 ............CT............... TTCTCTCCGCCGGGCAGTGTGATGCCGGAGGG 67512 29 93.1 32 ............CT............... GCAGCGGCCTGATGATGATCGATATGAACGGC 67573 29 89.7 32 ............CA...A........... TGAAATTGACGAGTGGATCAATCAGCGTATTG 67634 28 93.1 32 .....-.......A............... CGGTAACGCAAATATGATCCGATGTCGTCAGG 67694 29 93.1 32 ............CA............... TGCTTACCGAACGTGATAAAGGAAATGCAGAA 67755 28 86.2 32 ...-.......TCA............... GACAGTCACTATGTTCGGTATGTTTAAAAAGA 67815 29 96.6 32 .............C............... TTCGAGCACGGCCATGTGGAACTGTTCAGTGT 67876 28 89.7 32 .....-......CA............... TTACGCATTGTGATCGGGATTCGCTTCAGACG 67936 28 82.8 0 ............CAC.......-.....A | ========== ====== ====== ====== ============================= ================================ ================== 30 29 93.5 32 GTATTCCCCCCGTGTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCTTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTACAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGATATTTTTAGA # Right flank : ACATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCTGGATAACCCACATTCTGCCATATCTTGCAGGTTGCAATCAGAAAAGGCCTTACGTCGGTAAATTCATGCCTTGGGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGACAGGGCGGTATTCCTGCTTTAAAAACAATCACTAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGTTTATATATACAGTGTTTTTAGGTGGTCGGAGGTTGTGTCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATCGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCCAGCCCTGCTCAGGATTATACTTCCAGTGAGCTAGACTTGAACGATTATTGCATCAGGCATC # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGTGTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [16-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //