Array 1 1767-1315 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LFQR01000199.1 Frateuria defendens strain DHo contig_200, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                                                                          	Insertion/Deletion
==========	======	======	======	============================	=========================================================================================	==================
      1766	    28	  78.6	    32	T...TGA..T..C...............	CGCACCGAAGGTGCACAATTCCCCGTCACGGA                                                         	CCC [1749]
      1703	    28	  78.6	    25	.............C..TG.A.A.G....	TAACGGGAAAGCGCATGCTGGAAGC                                                                	G,ATC [1688,1692] Deletion [1651]
      1646	    28	  92.9	    32	T..........G................	ATCATCACGGCCGGCGGCTAGCGCATTGGCTT                                                         	G,GT [1639,1641]
      1583	    28	 100.0	    32	............................	ATGCCCGGCCAGGAGAAAGCCATGGGCACCAA                                                         	
      1523	    28	  85.7	    89	.....................C.G.CG.	CGGACAAGGACGGCGACGGCCAGAATTTCTGAGCTGCCTACCCGGCAGCTCAGAAACGACCACGACATGTTGGTCTCGGCGAACAGCCA	AAGT [1500]
      1402	    28	 100.0	    32	............................	ATCGCTCATCGAGTTCGCTGCTTTCCATATCG                                                         	
      1342	    28	 100.0	     0	............................	|                                                                                        	
==========	======	======	======	============================	=========================================================================================	==================
         7	    28	  90.8	    40	GTTCACTGCCGCGTAGGCAGCTCAGAAA	                                                                                         	       

# Left flank :   TCATGGGGTGTCCTTGAGCAGGGGCGCGCGGGGCAGGGGGCGCAGAGGATGGCGGCGAGGCGGCACACGCGCCACTGACGCAAGCTGCCAGCAACACGGTGGAGCGGGCCAGGGAACGCAAACTCATCGGGGTGGCATCCTTGATTCCGTGAGGCATCGCACAGGCGATGGGGTTTGGGGCGATGATAGCGGCCGAGGCAAATCCCCGCACGGGGGCCGCTGCGCAGTTTCGGTGTGTGAAAGCCTGGCCTGCGGCGGGTCCTCGTCGTGCCACGGGAAAAGTGCCCCGTGGCCAACGACCTTCACTTGGATGCAGATGCAGTCGACGGGAAGGGTCAGACTGGCTTATCCAGGCTGTTATTCCTCTTTCTTGTTCCGAGAGCGATGCGAACGGGGTGAGCCGTGGCCGCCAAGGGTGCCCCGAATGGTGCGCAATAACTGGTCGGGCTCAGCTACCCGGCAGTGAACTCCGGCAACATGAGCGCCTACGTGCGCCGGCT
# Right flank :  GAAAAACCACACGTCAGACTTAGGGATGCTCTGATCTATCGAGAATGAAGCAGACGTCCATACGTCCGCAACCTCTATCGCGACACCCTGGAAAAAACGGTCGATGTTCGTGGTTTCAGATCCCCAGCCGCTCCTGCAACACCGCCACCTGCCTGCGCAGCCGCTCGTTCTCGGCCGTCAATTCGTCCACGCGCTGGCGCAGGGCTTCGAGTTCCTTGCCCGAGACGGCTTTTTCGGCTTCGGGCTTGTCCTCGCGCGGCTTGCGGCGCGATTCGCGGACGCGCTTGGCGGCCTGCTTGAGTTCGTCCTTGCCGGCGACGGCGGCGGCGCGCTGTTCTTCTTCCGGCAGGGTGGCGACGGCGGCGGCGGCGCTGAGGGAGAGGGCGCCGGCCTTTACGGCTTCCACCACTTCGGGGGCGGCCTGTTTCTGGATCTTCTCGATCAGCACGACCTGGCTGTTGCTCAGGCGGGCGGCCTTGGCGAGGGCTTCGCGGCTGTCC

# Questionable array : NO	 Score: 4.81
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-1.09, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCGTAGGCAGCTCAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-13] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [55.0-38.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.87   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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