Array 1 6251-6448 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RJEQ01000017.1 Helicobacter pylori strain ZH17 17, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence            	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	===========================	=================================	==================
      6251	    27	  88.9	    27	....GC....................G	TGTCGTTATCAAAGCTGGCGTTGTCAT      	
      6305	    27	 100.0	    30	...........................	TGCTGTTTTCAAAAGTGGATTGGGCGCTAT   	
      6362	    27	  85.2	    33	....G.G......C...........G.	TACTATTACCAAAGCTTGAACTTGCACTATTAC	
      6422	    27	  88.9	     0	....G.G..................G.	|                                	
==========	======	======	======	===========================	=================================	==================
         4	    27	  90.8	    30	TAAAATTATAAGTGCCTTGATTGAAAT	                                 	       

# Left flank :   TAAACTTTGAGCGTCTTTATTGATAGTAGGATTACTGCTTTTAATGTAGTCTGTATCGCTATTTGCGATCTTACTATCACTAGCAGCGTTATTTAAAGCACTCTGTGAATCACTCAAGTCTTGTTGGTAGGTTTTTTGGGCTTGTTGTTGTAAATCGTCTCCTAAAAATTGGGTAATGATGGATTGTTTGTTAAAGGTTTCTTGTAAGGTTTCATCTTGCCCATTAATATCAAAGGTTACATCATAAGTGTTATTGCCCACTTCAACATGGCTAATGGCTTTATCGCCCTTATAGTTGATTAGATCCCACAAATAGCTTTGATAAACCCCATACTGGATCGCTCCGTTTGTAGTGAGAATGTCATAGGTTTGATTATCATTAAGGGTTTGATTGAGGTTAAAGATCGCACCAGAATTAAAAGACACACTGCCTTTAAGGCTAGCAAAAGGCGAACTTGAATTTAAAGTGTTAATGCCTGAGAAACTCACCTTATTCGTAT
# Right flank :  TTAGTTTGATTGAAAGAGATAACGCTATTATTGTTATTACCGCTGAAACTAAAGCCCCCATTCGTGTCATCTTTAAAGCTAGAGCCACTGACCTTGATATTCGAGCCTTTAAAATTCATGTAAGATTTTTGTGTCCCTGCATCGCTGTTATCAAAACTCGCTTGATTGATAGTGATATTGTTAGTCGCATTAAAATTGAGCGTGGTCCCACCACCATCAGCGTATGAGTTTCCGGTTGTTAAATGGCTAGAATTAAAATTAATCGTTTGAGCGTCATAAGTGCCTGTGATATAGCCGACATCACCTCCATTAATACCTGTGCCTCCAAAGCGGATATTCCCTCCCACATTAAGCGTGCCGCCATTGAATTTTTGCGTGAAACTAGCCCCACCAGTGCTATAAGTGGTAAGAGTGTTTAAATAATAAGTCCCAGAGCCTTGAGCACTACTAAAAAGACAATAGGAGTTGTGCGTGGGCGAATTAGGACCGCTTTCAATATT

# Questionable array : NO	 Score: 3.54
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.54, 5:-1.5, 6:0.25, 7:-0.04, 8:0.6, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TAAAATTATAAGTGCCTTGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.86%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [3-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : NA
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