Array 1 106882-106657 **** Predicted by CRISPRDetect 2.4 *** >NZ_SGXX01000010.1 Halorubrum sp. ASP121 NODE_10_length_116541_cov_0.000000, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 106881 30 100.0 34 .............................. AAGCATCCACCAGAAGGACCGAGCGACATCTCCC 106817 30 100.0 36 .............................. GAACACGAGGCCGTTAACATCGCCATCGACGCACTC 106751 30 100.0 35 .............................. CAACTTCTGCGGGGGTTTGAAATCATAGGAGGGGA 106686 30 83.3 0 A...T.............A...C......C | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 95.8 35 GTTTCAGATGAACCCTTGGGGATTTGAAGT # Left flank : ACAGGGGTTGAAATGTACACCGAAGAACTCCACGAACAGCGGCAAACAGACGACCGGCAGGATCGGCTTGTGTCCGCGTTCAATGGTGCGAAAGGTGAGCAGTTACGGAATGCGTCACTTGTCAGATCCGAATACCCGACCCAAGAGACGATCGTACTCACATCAGAAGCAGACCGCGAGCAGGCGCGTCGATACCAGCGACACAAGGACGCAAAGGATTGGAGTGCGGCTCAGGCGGCCTTCCAAGATCTTAAACGGCTACTGGTGAGTCTTTCCGCCGAAGAGCCAGTCGATGAACCGGTGATAATCGACGCGACAGACACCGACAGCTACCACCCGTCAACTGGGGCCTGACCTGTCGTACCAGAGACCCAAACCGACGTGGAACTCTGAGCCACCGTTTCGTCGACCCTAGGGGGTTAAGCGGGTATTAGAGGTCGACGGAAACGATTAAGTGAAACTCGGAATAATAGACAGGTGAGGTACCCGTTCTTGGGTAG # Right flank : CTGCGTCGCGAGCGTGTACGCCTCCTCGTTCAGTTCGGGATCATCGAATCCACGCGGGGCACAACGGGATTCGGTTCTTGATAGAGAGTATAAATTTAGACTGCGAGGCGGATTTCTTTAGCGGCCGCGAGTTTTTACGGGACAGTCGTGGACGGCAATCCGTTCTGGGAGTCCGGTCGCTCCACAGACAGGACACTCCACGAGCGGCGTCGGTGGGAGACTGCGACACTGCTCGCGGGCTGCCTCGAGATGTGCGCGGACGACGGGCGACTCACACCGCGTGATTGCCTGCGCAAGATGCATTTCAACTGCTTCGCGGGCCGTCCGTTCGGGCGTGCGCCGATTCCGGCTGGTCATCGCGATCCTTCCGGTTGTCGGGTGGCAATAGTCAAATATCGAGACGACGGTCTGTCGGTGGGCGTTCTCATCATATTATTGAGGCGAGAACGGCCGCTGACCACACCAGAATCACCGCTATCCGGAGTGACCAACGCACCCAT # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGAACCCTTGGGGATTTGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGTTTGAAGC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.70,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 114950-114657 **** Predicted by CRISPRDetect 2.4 *** >NZ_SGXX01000010.1 Halorubrum sp. ASP121 NODE_10_length_116541_cov_0.000000, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 114949 30 100.0 36 .............................. TCGTCGGGCAGTCCGCCCCAAGGGGCGGACGGAGGC 114883 30 100.0 35 .............................. AAAGACGCGCACGAGACGGAAGGCGGAATGGTCGT 114818 30 93.3 37 ...................A.G........ CCGACGTTCCGCTGATGCGTCAGCACGCCGGCGTCAA 114751 30 83.3 35 .............T....GA.A.......A ACATGGATACAGTCGAGAAGGAGTAGGATCAGGAC 114686 30 70.0 0 ..........GT......A..A..GA.TTG | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 89.3 36 GTTTCAGACGAACCCTTGTGGCTTTGAAGC # Left flank : TCGGCGAGTGGTGGATATCGGGGATCGTGGAGAAGCCCGCCTCGATGAGTTTTTCAGAGAGCGATTCGCCGACGCCGAAGAGGTCGCTGACGTCGATGAGACCGGATTCAATACCTCCAAAAAACCCCGCGCAGACTACCCCCTCTCTAGCGAGAGCAGGTTCATACTGGATATCGACGAGTCCGAGATCGACGTGAGGTACCACGTCCGCGCCCTGATCGAGACCGGTGCGTTATCGGCTGGGGCGGTCGATTACTATATGACGGAAGTCGGCGGCAAGACGCAGACCGAGTGGGTCACGGATCGCAGCGTCGACCAGTCAACAGTCAGCGGGAACGTTATTGAGGCGAAGAAAGTAATTGAACCGAAATAGAGGGGACTGACAGGCAATCCAAGAGCGATCCATCGACCTCCAGGAGTTGAGCGGGTATTGGAGGCCGACGGAAACGACTAAGTGAGGCCCGGAGCGAGAGACAGCTAAGACACCCGTTTTCGGGTGG # Right flank : ATACAGGCGACCCGGAAAACGCGTGAAGTGAATCCCCCGGCCCAGTGCGTTTATATTCGGTACCGAAGAACTGTCCAGATGGGTGTATTTACCGACATGATCTCCGTAACGGAGGCTGATTGATGCGGTTGCTAATTTCACTTGAGGCAACATCAGATGCGGCGTATAGGCACACCTACCACCACAAACTCCGGGGGCGGTTCTGGAAGGCGTTACGTGGGACTCAGTTCGAGGATGAACACGACAACAATCAGCCACTCGGCTTCGCGTTTTCCAACATCTTCCCGTGGGGAGACATACAGGCAGGCGACGAGCGCACCGTGATTGTCGCGTCGCCCCGAGAGCCACTACTGACGACGATAGCGAGCGACCTCAACATGGACCCGACGTTCGACATTGGGGATATGCGGTTCCGCGTCACGGACGTGACTCCCTTGTCGGTCGACGTCGGCGAGCCGGGAAAGCGTGGTACGATCCAGACCGATACAGGGGTGTTCGTC # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.46, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTTGTGGCTTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.63%AT] # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGTTTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //