Array 1 95692-92421 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJVG01000043.1 Colwellia sp. MT2012 CMT41_NODE_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 95691 28 100.0 32 ............................ TTTCAAAGTGAATAAAAAAGTGAATAAGTGAA 95631 28 100.0 32 ............................ AGTAACTTTTAATGATGATTGCGAGCCGTTGT 95571 28 100.0 32 ............................ AAAAGTGTTAAGCGTTAATTGCATTTCCTTTG 95511 28 100.0 32 ............................ TTAGCGCCTACGATTATCGTTAATGTTCTTGG 95451 28 100.0 32 ............................ ATCATCTAAAAAGTTTGTTGTACTAACACCAA 95391 28 100.0 32 ............................ TCTTTCATCTATAGTGTTAAGTGTATCAAACA 95331 28 100.0 32 ............................ TATTAGGTGTAAATCAAAAGTTTAGCATTATG 95271 28 100.0 32 ............................ TGTCATTACTATTATTGGTGTAACATCGTCTA 95211 28 100.0 32 ............................ AATACTCCGTATAGTTAACCTTATCCCCTGCT 95151 28 100.0 32 ............................ AGTAGCGCGCGTTTATTAAGAATTAGTATCGG 95091 28 100.0 32 ............................ GGACGGAAGCGGCGGCACTATAATTGAATATG 95031 28 100.0 32 ............................ TATACCATACTTCGCTAGTAGACAATACATCA 94971 28 100.0 32 ............................ GTTGAAACTGATTTGTATTTTATTACCGCTTT 94911 28 100.0 32 ............................ TTTCAAGGAAAAAAAATCAATAAATGTTTAAC 94851 28 100.0 32 ............................ ATACTTATGCACTCATCAATAATCAATAAACA 94791 28 100.0 32 ............................ TTAATGTCAGTAACCTTTATTGATCCCTCAAA 94731 28 100.0 32 ............................ TAGTCAATCTCCAGTGGATTTATCAAACGGTA 94671 28 100.0 32 ............................ TACCTACGGGCGTTACCATCACTGATGTTTCA 94611 28 100.0 32 ............................ GAGAAAGTACCGCTTGAAGATACCGATCTAAT 94551 28 100.0 32 ............................ GACAACTATGCTTATTCCAGTCGTTTCAGCTT 94491 28 100.0 32 ............................ TGAATCAGTCGAAGACGGCGCATGGTTCAAAA 94431 28 100.0 32 ............................ GCTAATCTATCGGATATCGATCACTCACTTAA 94371 28 100.0 32 ............................ GTAAACAATAAAAGGAAATGAATTATGATTGA 94311 28 100.0 32 ............................ ACAACAACGCAATCACTTTCTATATATGCAAA 94251 28 100.0 32 ............................ AGACCGTACCGTTTGCTGGATTAACCGAAGCT 94191 28 100.0 32 ............................ AGTATGAAGCTAGGCGAGTTGCAATACTTGAA 94131 28 100.0 32 ............................ ATATAACCAGTGTGACCCATTTCACCCCATAA 94071 28 100.0 32 ............................ GTTAGCATCAATGAAAGCGACGACAGTATTTG 94011 28 100.0 32 ............................ GCTTGATTTAAAGTTTGATACAGACACTCGGC 93951 28 100.0 32 ............................ TCAGTATTTAATGTTGCGCGTATACTTCCGTT 93891 28 100.0 32 ............................ GTTCACTGCTAAACAAAAATAAACTTAATATA 93831 28 100.0 32 ............................ ATTCTTGGTTTTGGTGTCGGCAAAATGCTTGG 93771 28 100.0 32 ............................ AGTTAGAGATTGTTTTGTAGAGGAAGGATTTG 93711 28 100.0 32 ............................ TTCACCATCGTCAATCATTCGTGTAGTTGTGT 93651 28 100.0 32 ............................ GATATTCTCGGTAACTATCGTAAAACAATCCG 93591 28 100.0 32 ............................ GTTATGGTTGGCTAACATACCAATACGAACCA 93531 28 100.0 32 ............................ ACAATAGCTATTGCCGGTAAAATAGTTAAAGG 93471 28 100.0 32 ............................ TTATTAACTTGCGTTACACTTTGCACCAGCGC 93411 28 100.0 32 ............................ TATACCATCGGGCGGCGCAACAACTAGTATAA 93351 28 100.0 32 ............................ TTACTATCAAGAAAGGTGATCGTGTGCTGTTT 93291 28 100.0 34 ............................ ACCAGCATTCAAGTCTGCCATGATACCTACAGAT 93229 28 100.0 32 ............................ GTGGTAGTAGATTCAGAGGCAACCGAGGCTAA 93169 28 100.0 32 ............................ ATATAAGAAGAGAACATAAGGCAAAACCTTAA 93109 28 100.0 32 ............................ TCAATTACTAAAGTACGTTCAGAGATGAGAGA 93049 28 100.0 32 ............................ GATGGTTTCTTGAATAGAACCCCATAAGAGCA 92989 28 100.0 32 ............................ TTATATCCCCGTACCATATAGGGACAATGTTG 92929 28 100.0 32 ............................ TCTTGGTCTTATCTAGGTGAGCGCGAAGGACT 92869 28 100.0 32 ............................ TGTGCTATAAGTTAACTGACCTGTACGAATAT 92809 28 100.0 32 ............................ ATAGGTATTGCAACAGTTATAGAAGAGGACGA 92749 28 100.0 32 ............................ TATTAATTCAAATAAAACACAATAAGGTGTTG 92689 28 100.0 32 ............................ ACTATTGAGGCTGTGATGCGTTTATATAAAAT 92629 28 100.0 32 ............................ AAAGAGACTACTTAAAAACGAACTGACTAGTT 92569 28 100.0 32 ............................ TTTGATAAAATCGCTACGCTTAAAAGGGTAAT 92509 28 100.0 32 ............................ GTGTAAAAATGTCTGATGTTGCTGACTTTGGC 92449 28 92.9 0 ....................A...T... | C [92424] ========== ====== ====== ====== ============================ ================================== ================== 55 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTCTTATCTATCCCTGAAATGGTGCAATACCGAACCATTTCAAGAAAACAAGCCAACATGACCGAAGCAAAATTAAGACGGTTAATTACTCGTAAATCTATCACTAAAGATGAAGTAAAATTGTATAAAGCAAAAATGTTTAGTCAAGGATTAGACAATGCTTATTTGGAATTAGTCAGTAGCTCTACTGGTGAAAAACATCGACGCTATATTCAATTTGGTGAGTTAAAAGATACACCAGTTGCAGGTGACTTTGATTCTTTTGGTTTAAGCAAACAAGCCACAGTCCCTTGGTTTTAAGGGAATATGGTTACTTTTAAAACCCGTTGAATGCAACGGGTTTATTTTTTCGGAAAAATTAACGTTTACCCTAAAAATCAACTCTTTAAAAATATGGTTAAATATTAACAAGTTACGAATCAGCTAAAAATTTAGGTTAAAAAGTCTAAAATCACCTAGCTGTTTGTTGTAACTTGTTTTTTTACTGTTATTCTATT # Right flank : GACATTCGTGATTGGCGACGGCAGTATTAGCAAATAGAAAAGAAGTTTATCAGCGTGCTAAGGAACGTGAATTGGAGTGTTGGAGGGGGCGATGGACAAACTGGTATGGTAATCCCCCCATTTTTAATGGAGGTCAGCAGTAGACCTTTTAAAGGGAACAAAGTGGTACTGAAATAGTGCTATATCATACTGTTAAAGAGAATTTTTTTGCTTGTACGGATGCAAGTGGCTACCTTATCTGTGCCACATATTTCAGTAAAGTTTAACTGGAGTAATACTATTTGCTAGCATTGTAAAAATGATTGATATTAGCTATCGCCAACAACATTTTATGCTTTGCCGAAGTATTAGCTGAGTGCACAAAAATAAGAGGGGGAATAAAGCCTTGGGTAAAAACAGCTTCCTCTATCCAAAGTAGTACATCATAACCAGTGCCATGCTCATCATCACCTAAGTCATGATCTAAACTTATTTCAGTTACTATATTTTGTTCGAGTAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //