Array 1 95458-96088 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAEHNZ010000005.1 Kingella bonacorsii strain Marseille-Q4569 NODE_5_length_139876_cov_37.821902, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	=================================	==================================	==================
     95458	    33	  97.0	    34	T................................	TTGGCATATTCAGGTCGGCGCATAGGGACAATAC	
     95525	    33	  97.0	    33	A................................	CCACAAGGTTTTAAATGTAAAATGGTATTGTCC 	
     95591	    33	  97.0	    33	A................................	CATGTTTCACATTATACACTAATTTTAAATCTT 	
     95657	    33	  97.0	    32	G................................	TTGTCCATAACGCCATAACTCAACAAATACTC  	
     95722	    33	  97.0	    34	G................................	TATAATGGGATTGAAAATGATTAAGTTAAATATT	
     95789	    33	  97.0	    34	G................................	TGCAAATAACACGTTTTCTAACGCTCGCAAATCG	
     95856	    33	 100.0	    34	.................................	ATCGCGTTGGCAAAAGGCGCGTTTTCGCTGGAAA	
     95923	    33	 100.0	    33	.................................	CGCAAGTAGGATTGATTGCTAACACTACGCAAC 	
     95989	    33	 100.0	    34	.................................	ATGGCAACGCAGCGACTTATACGCAAGATGATAT	
     96056	    33	  87.9	     0	TG...................A.A.........	|                                 	
==========	======	======	======	=================================	==================================	==================
        10	    33	  97.0	    34	CCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC	                                  	       

# Left flank :   TGCACATGGGAATACAAAATGCTGATGCTGATTACTTACGATATTTCGCTGGAAGACGCGGAAGGACAGGCAAGGTTGCGGCGCGTGGCGAAATTGTGTCTGGACTACGGCGTGCGCGTGCAGTATTCAGTGTTCGAATGCGACATCGCACCCGACCAGTGGGTTGTTTTAAAAGACAAACTCTTGAAAACCTACAACCCTGAAACCGACAGCCTGCGCTTTTACCATTTAGGCAGCAAATGGCGGCGCAAAGTGGAACACCACGGCGCGAAACCGGCGGTGGATGTGTTTAAGGATACGTTGATTGTGTGAATCGCCAACCTGCGGTTCTCATGAAAATGCGGCAGGGTTGGCGAATTGGGATTGTTCTTTAACAATCAGGATATTGCGAATGCGGGTGTAACGGAAAAGGCTGTGTTATACTCGCGCACGCGCTTTTCTTGGGAGCTTAGCGAACTCGGGGCTGCGAAACCTGATGGAGCAAGGCTTTTGAGAGAGGC
# Right flank :  CGTTTCCTTAATTTAGTAAGATAGTAAGAGACTATCCTAGATAACTCAGGAAACCCTGTTTAAGTTAGAATTTTCCTTATGAGAAAAATTGGCAATTTGGGCTTGGGCTGGAACCGGCAATGGGGCAGCGGGCATAATCTGACCACTGCGCTGCATGGCAGCGTGCAAAAGCGCAAGTATCGCGGGGCGGATTTTTTCAATATCAAGCGCAGCGAGGAAGAGTATTTCATGCGCTTGTCGCTGTCGCATAAAAAACTGGTATGGCGCGGGTTTGAGCCGCGTTTGAATTGGAGGTGGTCGCACGTGGACAGCAACCATTTTTATTATAAATACGACAACCATCGGGTGTTTTTGGATGTGTCCAAGCAGTTTAAATAGGGCGTGAACGGATAGGCAGCCTGAAAACGTGTTGAAGCGTTTTTAGGCTGCCTTTTTGTGTTCACGCGAGATTAGTGATGGATTAGTGATGCCCGCACCCGCCCTTATGCTTTTGCTCTTCC

# Questionable array : NO	 Score: 5.62
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched TCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-6.80,-5.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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