Array 1 20615-20125 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FODF01000017.1 Peptostreptococcus russellii strain Calf135, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	==============================	====================================	==================
     20614	    29	  96.7	    36	-.............................	ATACCTTTTCTGAAATTAATTCTATATTTTTATTTA	
     20549	    30	 100.0	    36	..............................	CCACCTACCGCTGCATAGTCTCTTTCTCCTAAAATA	
     20483	    30	 100.0	    36	..............................	TTGTCTGGCATTTCTCTTGCCCAAATATCTCTTTTA	
     20417	    30	 100.0	    36	..............................	TTTTGTCGGCTCTTTTTCCCCAAACATGGCTAGATC	
     20351	    30	 100.0	    36	..............................	AGCGAATAACTTTTATAGAATATTCTAACAATTAAA	
     20285	    30	 100.0	    35	..............................	TTAGTTCTTTGTGGTGGTGTGTATGCTTCCTCGCA 	
     20220	    30	 100.0	    35	..............................	AGCTGTAACGCAACGCGCACATCGTGGACTGTACG 	
     20155	    30	  90.0	     0	.......................AAC....	|                                   	G [20127]
==========	======	======	======	==============================	====================================	==================
         8	    30	  98.3	    36	GATTAACCGTAACATAAGATGTTTTGAAAT	                                    	       

# Left flank :   |
# Right flank :  TCAATGATTATCTATAATTCAAAATACTTTTCAAAATTAATTATATTCAGCAAATAAATTTAAAAAATATCAATTGACATATGAATTTACATATAAATATCTACTGGAAAATATAAACGTGATTACAGTAGATATTTTTTTGTCTATATGTATGTATATACTTTTTGTAAAAGTATTGCTTAGATTACCTAATTTTATAAAAATATATAGAATATTATACAAGTAAAATTAAACTTAATAATAAAAAATAGTATAAAGATTAGATGAAAGTATTTGAAAAGATTATCTAATATTAAGTTATAATTAAATAAAAAATACTATTTTTACTTTAATATATATAATTATATACCATTAAAATGCGATTAAAATACAATAATATAGAAAAAATCTATTATTTCTATATAAAAAAAGTATTTATATCTAAAAATGTGTTAGATGCTTAATATTAGGATACTTATGATATGAATTAAACAGTTTAGTGAAAACGATTTCGTGATTAT

# Questionable array : NO	 Score: 3.17
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GATTAACCGTAACATAAGATGTTTTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:73.33%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [4-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [85.0-0.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,0.41   Confidence: LOW] 

# Array family : NA
//


Array 1 169-5 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FODF01000054.1 Peptostreptococcus russellii strain Calf135, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	===============================	====================================	==================
       168	    31	 100.0	    35	...............................	AATAGAGCTCCTGGACTAAGGGGTAAAAGTATGGC 	
       102	    31	 100.0	    36	...............................	GAATACGGTCTAGAGGATTTATTCCCGTTTTCTGTA	
        35	    31	 100.0	     0	...............................	|                                   	
==========	======	======	======	===============================	====================================	==================
         3	    31	 100.0	    36	AGATTAACCGTAACATAAGATGTTTTGAAAT	                                    	       

# Left flank :   TGGAAGATAAGGAATTTGTGCCATTTTCTATAAAAGAGGGGATGTAATGAAAAAGAATATAAATTATAATTATGGATTTTTGTTTTATGATATAAATGAAAAGAGAGTCCAAAAAGTTTTTAAAATCTGCAAGAAATACCTCACTCACTATCAAAAATCTGTTTTTAGAGGGGAGATGACTCCATCTAAATTTATGAAAATAAAAAGTGAATTGAGTAAGGTAGTAGAAGATGATGATTTCATATGTATTATAAAACTTATGAATGATAGTGTTTTTGGGGAGGAGATCATTGGTAAGGATAAGAGTGACGACAATTTGATACTATAATTACCAGGTGCGTTTTTCTAGAAAGGCTATGTAAGTATTGAAATTTGGCTGTATATATGAGATTATATTATTATAATAGACTTTTTATTTTCACTTGGTAAAAATATTTTGAACTGTTGATATTTCAAGGAAACACAGAGTTTTTGATTTTAAAGAATGTTGGATAAACAGT
# Right flank :  TTTTT

# Questionable array : NO	 Score: 2.67
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AGATTAACCGTAACATAAGATGTTTTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:74.19%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [6.7-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.27   Confidence: MEDIUM] 

# Array family : NA
//