Array 1 35557-34113 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFAG010000006.1 Eubacterium callanderi strain GGCC_0197 NODE_6_length_211734_cov_409.078383, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 35556 30 100.0 36 .............................. CCCGCAGCGAATACGCTTGCCATGGAGGTTGTCAGC 35490 30 100.0 35 .............................. CGGAAGGCTGCCATTTGCTTTCCATAAAGCCTTTT 35425 30 100.0 37 .............................. CAATTGAGGGGTCAACTTTATTAGCTTTTCTATATTA 35358 30 100.0 37 .............................. TTTTTGACTAAAAAAAAATAGCGTTAGAAAATCTTTC 35291 30 100.0 36 .............................. GGAGTTTTCGGATAAAGCGGGAAATGTCTCAAAAAC 35225 30 100.0 36 .............................. GCTGCCCACCGAAGGATCTGCCCGGATTTTCCGCCT 35159 30 100.0 36 .............................. TGAGCGAAAAATTGGCAGTACCACTGAAGGGAATCT 35093 30 100.0 35 .............................. TCCACAGATGTTGAGCCATTAACACAAGGGTTAGC 35028 30 100.0 34 .............................. TCTTATGTTACATCAGAGGGTGTAAAAAGAAAAA 34964 30 100.0 36 .............................. ATACAATCTTTAAAGGCTAATTTATATCCAGCAATA 34898 30 100.0 34 .............................. CGAAGTTAAATAGTGGCGTGAAGGGATTAATCCC 34834 30 100.0 34 .............................. CGTTCTTTACCGAGACCATACCAGCAGCGTGGAA 34770 30 100.0 36 .............................. CTACCTCTGGATACCAGATATAACCCCGCCAATCGT 34704 30 100.0 36 .............................. ATGGTGATGGGAAAAATAAGCCCATCGGCATGATCC 34638 30 100.0 35 .............................. TGAAATGGGGTTATGAAGTATCCTTCCGGAAAGGA 34573 30 100.0 37 .............................. GACGCGCGATATTCGCCGTCAATAAACTTCAGCCACC 34506 30 100.0 37 .............................. GTAAATAACCCTGCCAATAATCCATAGCTTTCATCCC 34439 30 100.0 35 .............................. ATATATGGAGGTTAAGCGATGTTTAAAAAATTAAT 34374 30 100.0 35 .............................. TGGACAAAAGCATACCAGGACAGGTAAATATGAAG 34309 30 100.0 34 .............................. AGGGTATCCTCCAGCTTTTTGGCCTCGGTACTGT 34245 30 100.0 35 .............................. GGGGTTAGGCTTCCCCACCATTCGCCAAAGGCTTC 34180 30 93.3 4 ........C..................T.. GAAA G,GGA [34153,34155] Deletion [34147] 34142 30 70.0 0 ........A...T.AA..C.A......TCA | ========== ====== ====== ====== ============================== ===================================== ================== 23 30 98.4 34 GTTGAAGATTAACATGAGATGTATTTAAAT # Left flank : TTTATCCCCTTTAATATGGGAGAGAAGCTATGAGTACAGATAAAAATTTTAATTATAATTATGCCTTCGTGTTTTATGATGTTAATGAAAAGCGTGTGGCTAAAATTTTTAAAATTTGCAAAAAATATCTTGTGCATTATCAGAAATCTGTATTCAGAGGAGACATAACCCCTTCAAAATTGATTGCCCTGAAAAACGAACTGAAAAAAATTATTGTTGAAGATGAAGACTTCGTCTGTATTGTAAAACTGCTGAATGGAAATGTCTTTGGAGAAGAAGTCATGGGCATCTCCGAATCCTCAGAAGACCTTTTTCTGTAGCCCTATTTTACCAGGCACAGAAAATTTTAAAAAGTCAAAATCCTTTTAAACAAAAGGTTTGAGCGCCATTTGAAAGAAGAGTTGACGAAAATCTCTGCGGCTGGTAAATTTGTAGAGAAATGGCTTGAAATCAAGGGTCTTAGAGAATATAAATAGAGGAAGAATGGCTTGATTGTTATG # Right flank : ACATAAAACAAAAACCGTCAGCATACGCTGACGGTATAAAAAGCTTTTATTCTTCCTCGCTATTCTCGAACAAAGTGTCCTCCTGTTCGGCATAGAGGCTGTCCAACTCCTCATTAAGCAGCTGGTTTGCGAGGATAACTTCTTTGATTTTCTGGACCAGGCCGGAGGCGGTCAGCAGACAGGCTGGGATGATGATAAACCAAAACATGTGAAACATACTGACTTCTCCGCCGGTAAAGAAGGTGTATATCAGTCCCCCAAAGCACCCGAGCATGATGACTACGGTCACGATGAGGGTAGCATTGAAGGACATATCCATGGTCAGGGCCACAAAAATGCACAGGACAAAAAGAATCAGGTAGTCCATAGCAATAAAACGTCCTGAGGACAGGGCGGTGAATACCCCCATGCCCAGCATGGCAATCACAAATAAAATCAGGCGCAGGGATACGGCGGAATATTTAAAGGCACCGAGGGACACGGCATCAACATTTTCGTAG # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 44931-46076 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFAG010000016.1 Eubacterium callanderi strain GGCC_0197 NODE_16_length_91422_cov_382.679458, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 44931 30 100.0 37 .............................. TTTTATAGAATGAACGTACTGACAGCGTTGTTGTTTA 44998 30 100.0 35 .............................. AAATATTTTTGTCCATTGTATTTTCTCCTTTAGAA 45063 30 100.0 35 .............................. CGATTAAATGGAAAAATATTTAACTATGCCGGCGG 45128 30 100.0 35 .............................. GTATCTTCCCGGTAGAGGGAGCCCCAAAAGACCGC 45193 30 100.0 35 .............................. ATTTTTATGATTATGTAATATGCAACAATGCCAAT 45258 30 100.0 36 .............................. TCGCTTTTTATTTTTGGGAAAATTCTTTACATTATT 45324 30 100.0 37 .............................. GAGAGAAAAAACCTCGCCATCGGTCCTAATGCGCCAG 45391 30 100.0 36 .............................. GCGCTGTAATAGGCCACCCATAAGCCGTAATCCCCC 45457 30 100.0 35 .............................. ACAGCAAATACAGCGACGGTTTGATTGGCTGGCAG 45522 30 100.0 35 .............................. TACCTTAATCTGACCGTCACCCGCCGTTTTACCAT 45587 30 100.0 35 .............................. AATAATCAGATCCAGATTACCAGCTTCGACATCAG 45652 30 100.0 35 .............................. TTCTCGATGCTGTTCTACTTCAATATGCCGCGCCT 45717 30 100.0 36 .............................. GAAAGAGAGCAGGGCGTATTACCGGCGGTTAAGCGA 45783 30 100.0 36 .............................. CTAAGTTTGGCAGCGATTATAAAAAGCCGGACGCTG 45849 30 100.0 36 .............................. TGCTGTCCATAAGTATGTTTGAACCATTGCCAATAA 45915 30 100.0 36 .............................. TTCACACGACAATCAGCTGCATGTGCCTTGTTAACC 45981 30 96.7 34 ............C................. CAGGCAGTGATCGCTCTGGCGGCCTCGATTTCTG 46045 30 83.3 0 ............C.......A.C...T.T. | C,C [46067,46070] ========== ====== ====== ====== ============================== ===================================== ================== 18 30 98.9 36 GTTGAAGTTTAATATGAGATGTATTTAAAT # Left flank : ATGCGTTAAGAATCATAGGCAGGTCTCCTGACTTACGGATTAACATGATCCGACGCCTTCCCTTTCAGTGGCACTTGTCGGTCACTACCGCTTACAGTGATGGGTTCGTTCAGGACTTCCACCTGATTCCCTATTCTCCCCTTATGGGGCACCATATCATTCGTAAATATTAACTTGATCTTTATTATAACGGCATTTTTTTCTTTTTGCAAGCGTTATCTGCAATTTTTTATGTATTATAAAAAAACAATTTCAAGAAATGCCCACAGGGAGTTGCTCTCGGAGGGCTTTGCGCGTATAATTTTATTATGAAAAAGATTTAAGAATTTCCCAGGTATCTTTTGGTGCAGATGGATAAAAAGAACCATAAACAAATGCTTTGGAAAGAAAATGGGATAAAAATATCATAAGCCTTACCTGCCTGGTAAAAATAATAAAAAATGGCTAAGCCAAAAGGATTAAAAGGTATTCGTTAATTTAAGATTGGCTTGATTGCTATG # Right flank : TGAACAATATTTTACTAAGCTTTTCAGATTAGACTTTGTGAATATTCAGCATAGTTTTACCAGTTGTTGTATTATCACTGTTCTATGGAAAGTTTACAAAGCAGAGGTGCAGCTTGGGCTGGTTTTAAGCATATTATCAGATAATGGATAAAAAGGTGAGGAGGGAAGTGCATGCTTTCGAGGGAAGCTTTTCTGGAGAAATTGAGAAGAGAAATTGATGCAGAGAATCATTTGATCGCAGTCGCATCTGGAACGGGGCTGACGGCAAAATACGCGATTCAGGGCGGCGCTGATTTTCTTCTGGCGCTGAACTCAGGCATTTTCCGCGGGATGGGACGCGGTTCTCTTGGCGGGCTTTTGCCCTATGCCAACAGTAATGATATGGTTTATGAGTTTGGTGTGCGGGAGCTTATTCCGCTGGTGGGTGATTTTCCAGTGGTATTTGGCCTGAACGCCACAGATCCCACAAGGGATATGGCTGCTTATCTCGATGAAATCAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGTTTAATATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //