Array 1 96845-93463 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLAJ01000006.1 Klebsiella pneumoniae strain k1336, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 96844 29 100.0 32 ............................. GTCGTCGCCTGTGCATCACTCAACGTGACCTT 96783 29 96.6 32 ............................A GATTAGATCAGGAAATCGTCCAGTGATTTACC 96722 29 100.0 32 ............................. GCTGGCCGGAGTGTCGGTCATCGCCAGACCCA 96661 29 100.0 32 ............................. CGGTAGTCGCCTCCCATCTGGTTAAGCTGCGC 96600 29 100.0 32 ............................. GCTGCGTCTATTGGCGATATAGTTACGGATCT 96539 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 96478 29 100.0 32 ............................. GCGATCTAATCGACCGTTTCAACGCCCTGGAA 96417 29 100.0 32 ............................. CATCGCTTTCCATCGCAGCTTTTTCCAGGCGC 96356 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 96295 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 96234 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 96172 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 96111 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 96050 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 95989 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 95928 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 95867 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 95806 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 95745 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 95684 29 100.0 32 ............................. ATTAAATTTTTCGGGTAAAGAGAAATTGCGAA 95623 29 100.0 32 ............................. CTGCGAGCTACCCTGAATTTCAGCGACAGGGG 95562 29 100.0 32 ............................. TAGTGCCATATATTATCCTCTGCGGTATGACT 95501 29 100.0 32 ............................. GAGACTATTATGCGAAAAACTATTACTCCCGA 95440 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 95379 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 95318 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 95257 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 95196 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 95135 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 95074 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTACAGGTAATACGT 95013 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 94952 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 94891 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 94830 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 94769 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 94708 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 94647 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 94586 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 94525 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 94464 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 94403 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 94342 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 94281 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 94220 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 94159 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 94098 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 94037 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 93976 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 93915 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 93854 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 93793 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 93732 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 93671 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 93610 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 93549 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 93491 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 56 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCTGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGACCGCGTTGCCGTTCGCCATCACTTATCCACAATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //