Array 1 74419-81021 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPJE01000004.1 Halanaerobium sp. MA284_MarDTE_T2 Ga0255678_104, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================ ================== 74419 37 100.0 37 ..................................... CAGCCAGAGCCGAGTGAAGTACCTTCTCCTAATGTTG 74493 37 100.0 37 ..................................... GCAGCACAAGCCAGAAGATTATTATTAGAAATAAAAA 74567 37 100.0 37 ..................................... TGCATCTTATTTTGCGCCTGTGTCATCCCAGATGTAA 74641 37 100.0 37 ..................................... GATGGATTAGAGGATAAGTGTATAGAGTTGGCTAAAG 74715 37 100.0 37 ..................................... CCTTCGCTTCTTGACATCTGTTGTAATAATCTTTGAC 74789 37 100.0 36 ..................................... GTTTTTAATTAATTCATTTTTTATTTGTTCTATTTC 74862 37 100.0 38 ..................................... TTTCTACAGCCTGAACGAACCCGTTCTCAATCATTTTT 74937 37 100.0 36 ..................................... GCTGATTGAGCCACAATCTGTGCTTCTGTGGCTGAC 75010 37 100.0 41 ..................................... GATACATTGAGTTTTGGCACAATGGATGCAGGATTCTTCGG 75088 37 100.0 35 ..................................... GCGCCCTCTATTGGTGGCAAACCTGTATCTTTGCT 75160 37 100.0 36 ..................................... CTTCCTGTATTCATCATACCTTCTGTATCCTTCGTA 75233 37 100.0 37 ..................................... TCTGATTAAGTTGTGCCATATCTGACTTTTGGTCTTT 75307 37 100.0 38 ..................................... TTACTTCACCTTCTTAAATAAAAATCCTACTTTATCGT 75382 37 100.0 37 ..................................... GTGTCATAATAACCTGTCTGTCTGGCTTACCACTTGC 75456 37 100.0 37 ..................................... TCTTATTAGCATCTTCTACACCTCTCAAACGCGTAAT 75530 37 100.0 36 ..................................... TCTACCCACAATGTAAGCCCATGGCTACAATTTTGA 75603 37 100.0 39 ..................................... AACTCATAGCCGTATCTGCCAAATGCTTCAGCATTGCCT 75679 37 100.0 35 ..................................... ATTATACACTTCCTTCATTTTGCTGTCAGTAAAAT 75751 37 100.0 37 ..................................... ATATTAATATTATCAAAGATATTAACCATTACTTTTA 75825 37 100.0 37 ..................................... TTCAACTCACACTCTACCATATAGTGGGCAAGTGTAC 75899 37 100.0 37 ..................................... GATGACCAGCTGGAAGAGGGAGAGGCTCCACTCTCAG 75973 37 100.0 38 ..................................... TTCATAGACATTACCAGCACAGTCAACCATCCCATTAA 76048 37 100.0 37 ..................................... CTAATATATCCCCTTCATATATTTCTTTGCCATTTTT 76122 37 100.0 38 ..................................... GCTGGCTGCGTGCCTGATCTGCTCGACCTTTGGCTTTA 76197 37 100.0 37 ..................................... ATGAAAAGATTATTCAGTCAAAATACAACGAAGATGA 76271 37 100.0 37 ..................................... TTAACTGTAACTGCTGCATCTTGCCTTGTTGCTGTTA 76345 37 100.0 36 ..................................... ATTAATCAGCTATAATGACAGTGATAGAGGTTCGAT 76418 37 100.0 36 ..................................... AGTAAGTGCGAAAATTAGCATAGTGAGTTTCTTCAA 76491 37 100.0 36 ..................................... TTCCATCAAAAGAGAATTAATTTTTATCTATATTCT 76564 37 100.0 37 ..................................... GTTTAAGAGTCTGGTTATCTACTCATTTAACCTATGA 76638 37 100.0 35 ..................................... GCAAAAATATTTGTAGTTAGTATGGGCGATCTCTT 76710 37 100.0 36 ..................................... TGTAAATCACTCTCACCTAATGCTGAACCTCTCCAT 76783 37 100.0 36 ..................................... CCCTTTCTCTTTTCATATATCAAATTCAACCTTTAA 76856 37 100.0 36 ..................................... TTGTTCTTTTCCACCTTCCATTTCCGTTACTAAAGT 76929 37 100.0 36 ..................................... GATGTAGTTATGAATACTAAGTGGACTCAGAAGGGC 77002 37 100.0 35 ..................................... AAGATCAGGAATGTGAGGTTAGTTGATTAATGAAT 77074 37 100.0 36 ..................................... TTTCTGGTGATCCACTCAGTGACGCCTGTAGTATTT 77147 37 100.0 39 ..................................... GGAGAGAATATCCGCTTTGACGGTGACTTGTACCAGGTA 77223 37 100.0 37 ..................................... TCAGGTAAATATTTGAGTCTACGCGGTATGTTAAGCA 77297 37 100.0 37 ..................................... GCTTAACAGCTTGTTTCCGCAACTTACTTGCTGATAA 77371 37 100.0 36 ..................................... GTAAGGGTAATCCTCGTGAGCTGAATGGATTGTGTC 77444 37 100.0 35 ..................................... CACATTTCTGTTCCTGTTTCTATTAATGTTGTAGA 77516 37 100.0 37 ..................................... TTCATATTGTCTTACAGTAGCTTCAGAAGCCATTTCT 77590 37 100.0 37 ..................................... TCTGTATGCTCTATTATCGTTTCCAGCCCCATGTCTA 77664 36 97.3 36 .................-................... CTTAATAAAACACCGCCTTCAGTTTCATTTGGTTCG 77736 37 100.0 37 ..................................... CATCAGAATTAGATAATAGTAATACAAAATATAATTT 77810 37 100.0 35 ..................................... TCAATAGCAAACATTCCATTGAGTGCATACTTTCT 77882 37 100.0 38 ..................................... GCAAAGTATTTATCTATCACCTTTTCCATATCATCAAC 77957 37 100.0 37 ..................................... CGATGTACCAATCTAATATTTTGAGCATTGTTTCTTT 78031 37 100.0 38 ..................................... GAGTCCTTTGCTAGCAGCTTTCTTAAACTTGCTGCCGG 78106 37 100.0 37 ..................................... TTTTAGCAAGGTGGTAAATTGATAAAAGTAAATCTTT 78180 37 100.0 35 ..................................... AAGCTGAATCTAAACTATCCTGCATTTCTTTTACT 78252 37 100.0 37 ..................................... TCATTTTCTATGCCTTCAAATTGTGGGTATGGTTCTA 78326 37 100.0 37 ..................................... TCAAATTTAGATTGCCTTTTATCTAATCGTGATTTGA 78400 37 100.0 37 ..................................... AATCCCAGCGTTCAGACGGTGCGATAGCTCAACACGC 78474 37 100.0 38 ..................................... CTCCTTTTTTTTAGCTTTTTTTGCCCTCTATACTCTAT 78549 37 100.0 36 ..................................... AGAAAGATATGTATTAGAAGCAGAAGAAATTGTCAG 78622 37 100.0 48 ..................................... ACTCATTTGGGCTTTCCAGAATATACTGGACCACTGGGATTACTTGTT 78707 37 100.0 36 ..................................... ACTCATTTGGGCTACTGTCCAGCTTGCGAAATCATT 78780 37 100.0 37 ..................................... AAGTTAACCTGCACTTTACCGCCACCGTTGTTATTAA 78854 37 100.0 35 ..................................... AGCTGCTCTTTCATCACAGATAAACTGCTGATTGT 78926 37 100.0 37 ..................................... ATAAACTGGTATTTATCATAAATACACATGTTGCTGA 79000 37 100.0 37 ..................................... CTGCCCGGTAACGGTGGCAAACCTACTGACTTGCTAT 79074 37 100.0 34 ..................................... TTAATAAAACTTTTCTGTGAACTATCAGCCTTAG 79145 37 100.0 37 ..................................... TCTTCTGTTAGCTCATCATTGTGTTTAAAGTATAAAT 79219 37 100.0 37 ..................................... CTAAAATAAAATCACCTTCAATCATAAACATTGGTAA 79293 37 100.0 35 ..................................... AATATATATCGCTGATACCACACTCCTGTATATTC 79365 37 100.0 35 ..................................... CTAACTACTAATTCAGCACGTTTAGTTAATTCCAT 79437 37 100.0 39 ..................................... GCTATTCATACTAGAGATTTTGCTGACTCTCTACTTTAC 79513 37 100.0 35 ..................................... TTCTGACATTGATGCCATCCGCTTATCTACCTTAG 79585 37 100.0 35 ..................................... ACACTGGTATGCAGTGAAGCAAGAGCTTCATCTTC 79657 37 100.0 36 ..................................... TCGGAGAATTCCGACACAGAGTCTGGTGATGAATTT 79730 37 100.0 36 ..................................... GCTGACTTGCTATCATCAGCCTGATATTTAGCTGTC 79803 37 100.0 37 ..................................... GTGCCTTCAAGATCCCTCCCTGCATTTTCAGAAAACC 79877 37 100.0 40 ..................................... GTACCTGCTCATCTGTCCTCATATCGTCTGCTCTATCTAC 79954 37 100.0 36 ..................................... CCATTAGTATCATTGGGGTTGTATCAGTTGTTGCGT 80027 37 100.0 37 ..................................... GCTAGTAATAATAATTGTCTAGCTCTCGGTGCTAATT 80101 37 100.0 36 ..................................... CTCTTTTTTCTAGCCCGGACCAGACTTTTATGATTG 80174 37 100.0 38 ..................................... GAAACCTCAAGGCAACACTTTCAGCTCTTTTGTCGAAT 80249 37 100.0 37 ..................................... GCTTATTGTGCTACCTCCATCTTCAACAGCCTGTGAT 80323 37 100.0 37 ..................................... CCTCTATATTATAATAACATCTTATCCAACTCATTGC 80397 37 100.0 37 ..................................... ATAACAAGGTTGCCGAGAGTGAGTGGGATATGGAGAT 80471 37 100.0 36 ..................................... AGCAAGTATGCTGTCTAATCCGTGCTCTATAACTTC 80544 37 100.0 36 ..................................... GCTGTACATTAATTGCTTCTCTTGCCATTAATTAAT 80617 37 100.0 40 ..................................... TCTCTGGCTAAACTTTCTTTTTGCACAAAATAACCAGTTG 80694 37 100.0 35 ..................................... CTTTATCGTCATTTTGGTTACCCCACTTAGATTTG 80766 37 100.0 35 ..................................... TTCATAACCTTCATTGTTTATTTTAGCTTTTATTG 80838 37 100.0 36 ..................................... TCATATCTTCACCAACATCTTCTTCATATAATTTTT 80911 37 100.0 37 ..................................... ATATATACAGCAGAGTAATGAGCGAATAGAAAACTTT 80985 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================ ================== 90 37 100.0 37 CTAACATTTACCTCTCCGCTTACTAGGAGACTGAAAG # Left flank : ATAAACTTTTCAGAGCCCATGATAGTTGACACTAAATTTGGAAAAGAAAAAGAGTTTTACAAACTCAGTGTTACTGGTTATGCTCTTGTTATGGAATCATTATTCTCTTTTCCGGTAAATTTAGGATGTCTTGTTTATCCAGGATTCAAGAACAAAAGAATATTAATTAAAAGAGATCTATTTATTATAACTGATGAATTGCGCCAAAAATTTATTGAGCAGCGCGACGAAAAAATGAGAATGATTTATGAAGATATTGATCCTGGTATTGCCAATAATTGTTATAAAATATGTCCTTTTTATGATGAGTGTAATTAAATGAAGGAATTGTTGTCTATTTAAAGAATAAATCAAGTAAGATAATATAATTAGAATTAATTTTCGCAAAAGGCAGGGGTGTTGATGCAGAAAATAATTTTTCGAGATAAGTCAATGGAATTAAAAGGATTGTCATACTGGAATACCTGTTATATAAGGGTTTGTTCTTTTTGAAAATTGCT # Right flank : GATTTACTAGGAGACTGAAAGATTTACTAGGAGACTGAAAGATGGGCCTCTGCTGATAATCTCAACATTTCTGTTATGAGACAAGAAATATTTCAGTAAGCAGGATATACTTTTCACCAGTAAATATTTAAAAGAACAGGGTATTCTCATACCCTGAAATTAATTATTGTTCATTATCAATTTTTTTATCTAAGTCTTTGAATAAAACATATAATGCTCTGGCAACTGTAATTCCATCAATTGGATTCATAACTGAAGTAAGTTTTTCTCTGTTGTAGGCTTCATTTTCAGGTTCGATTAGATGACATCCTGCTTCATAATCTGGCATACAGGCAAAAAAGCCCAGTGATGTTTTTCCGAAAATAACAGTAATACTAGAAAGGCTTTCGACTCTAATCTCAAAATAACTGCCATAATTTTTAAATTCAATTATCCTCCCCAGCCATTTCTGTTTCTGATAATAACAATTAAAAGTCATATTAAACAGCTCCCTAAGTATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTAACATTTACCTCTCCGCTTACTAGGAGACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.20,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //