Array 1 181789-179261 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSEZ010000003.1 Klebsiella pneumoniae strain GCKp45 NODE_3_length_252151_cov_59.551703, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 181788 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 181727 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 181666 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 181605 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 181543 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 181482 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 181421 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 181360 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 181299 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181238 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181177 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181116 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181055 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 180994 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 180933 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 180872 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 180811 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 180750 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 180689 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 180628 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 180567 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 180506 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 180445 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 180384 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 180323 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180262 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180201 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180140 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180079 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180018 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 179957 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 179896 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 179835 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 179774 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 179713 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 179652 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 179591 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 179530 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 179469 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 179408 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 179347 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179289 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //