Array 1 4967101-4963173 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021740.1 Klebsiella pneumoniae strain AR_0126 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4967100 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 4967041 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 4966980 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 4966919 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 4966858 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 4966797 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 4966736 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 4966675 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 4966614 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 4966553 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 4966492 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 4966431 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 4966370 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 4966309 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 4966248 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 4966187 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 4966126 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 4966065 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 4966004 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 4965943 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 4965882 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 4965821 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 4965760 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 4965699 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 4965638 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 4965577 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 4965516 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 4965455 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 4965394 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 4965333 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 4965272 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 4965211 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 4965150 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 4965089 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 4965028 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 4964967 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 4964906 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 4964845 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 4964784 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 4964723 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 4964662 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 4964601 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 4964540 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 4964479 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 4964418 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 4964357 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 4964296 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 4964235 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 4964174 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 4964113 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 4964052 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 4963991 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 4963930 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 4963869 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 4963808 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 4963747 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 4963686 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 4963625 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 4963564 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 4963503 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 4963442 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 4963381 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 4963320 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 4963259 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 4963201 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //