Array 1 34530-37858 **** Predicted by CRISPRDetect 2.4 *** >NZ_QEME02000020.1 Xanthomonas vasicola strain 4W4 scf_27054_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 34530 31 100.0 33 ............................... AGGCAAATGCTTGCCTGGCGATGGTCAGTGCGC 34594 31 100.0 34 ............................... CCTCTGTGGATCTCGCTCGCTATCGGCCTCCTGT 34659 31 100.0 34 ............................... TGCCAGGGCGCGCACACTCTTCCTGTCTAGACGC 34724 31 100.0 35 ............................... CACCACCAATCGACTACACACGCCGACCGGTGCAA 34790 31 100.0 36 ............................... AAGCATGGCGATGTGGTTCGCGACTTCCGCGTGCGG 34857 31 100.0 36 ............................... GTCAGGTAAAGGGTCTGCTCTGCCTTTGCATACAGG 34924 31 100.0 35 ............................... AGGCATACACAGGAAACTAGGGATAAAATAAGTGC 34990 31 100.0 35 ............................... TTCACCTAGGCTCCTACCCCACCGCTGACCTGGCC 35056 31 100.0 35 ............................... GCTCCTCCACAGCCTTAGTTGAGTCATGGCATAGC 35122 31 100.0 34 ............................... CAGTTCTACGCAGAACACGAAACAATGACGACAT 35187 31 100.0 35 ............................... CTTTAGCAGGCGTTCACCACTCTCTTGATCATATG 35253 31 100.0 33 ............................... CTGGTGTGTCTGTCTACCTTGGTAAGAGTTGGC 35317 31 100.0 37 ............................... CAAGTCCACCTTGTCATAACCGTACCGATTCGCACCG 35385 31 100.0 35 ............................... AACCAACGCAAGTCTTCCGGGGCGTCTGGATCTGC 35451 31 100.0 36 ............................... CTGAAGCCCTGCCAGGTTACGTACCTTCCGAAGGGA 35518 31 100.0 35 ............................... CAGTCCTGAATAATGTCCTCATGCCCAATGAACTG 35584 31 100.0 37 ............................... CCTTGCGTTCGCCTGTCTTTGGGTCTCCCGTCCAGTG 35652 31 100.0 35 ............................... AGATTTTGGCGGTGCATCTGTTGTACTCCCTCTGC 35718 31 100.0 34 ............................... TGGGCATTGGACAACCATCAGCCCCTATGCAAGC 35783 31 100.0 35 ............................... CCACTGTGGCAGGGCCTTGACATAACCGGGGAAGC 35849 31 100.0 36 ............................... AGTACAGGTCACTGCATAGTGCCTACTGCAGTACGG 35916 31 100.0 35 ............................... CAATATGGAGAGTTCCTGATGGACTACCTAGTTGA 35982 31 100.0 34 ............................... TCGCCAGAGAGCCTTACCAGCGAACTTGCCGTGG 36047 31 100.0 35 ............................... AAGGTAAGCACAATGTGGTTGAGCAAGATCTGTCC 36113 31 100.0 34 ............................... TTAGCAAGCATGCCAACGTAGAGGTGGGCCTGAA 36178 31 100.0 34 ............................... TTAGCACCACCAGCAAAGCGGGCTAGCTGATACT 36243 31 100.0 36 ............................... AGGCACTGCACTGTCCCAGCCATTGGGGCCCTTTGA 36310 31 100.0 35 ............................... TGGCGGATTAGCTCCCCCTTAGCTGTATCCACGTA 36376 31 100.0 32 ............................... ACAAAATAAGGAGGCCCTATGGCCGAGCAAAA 36439 31 100.0 35 ............................... TTTGTCGGCTTTTTCAGCAAGGGCAAGCAGGAGAC 36505 31 100.0 34 ............................... GAGCTATGCGTGTTCGAACCAGTGCCAGTACACA 36570 31 100.0 36 ............................... AGCAATGTGGATTCGCAGGCTGGCGGCTCGTTACAG 36637 31 100.0 34 ............................... TGGGAGACTGTCAGACAATAAGCTGGTGCTGACG 36702 31 100.0 35 ............................... TGCAGGATGCACAGAACCACCAAGCATGGATGCAG 36768 31 100.0 35 ............................... CTAAGTGATAGCGAAGAATGCAGGCGGCTGACCTA 36834 31 100.0 37 ............................... GTGTACACATCTGCCGCCCCTAGGTCCGCAGAGGCAA 36902 31 100.0 35 ............................... AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG 36968 31 100.0 35 ............................... AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG 37034 31 100.0 35 ............................... ACTCTTTTGTACCAGCAGCGCATCATTCTGCGCCA 37100 31 100.0 34 ............................... CTGTGCTGCATGGCGCACGCGAGATTGCAGAGTT 37165 31 100.0 35 ............................... TTTGTCAAACATGGTAGCGGCCTCCGTTGGTGTAG 37231 31 100.0 33 ............................... ACCTTTGCAACCCTTACCAGCATACAGGCCGAT 37295 31 100.0 36 ............................... ATCCCCATCCTCGTTTTGTGTGGCCGGTGCGGGCCG 37362 31 96.8 38 .....................C......... GTCTCGCTGGCGACGTTCTGGCTGCTGCTGCCCACCGG 37431 31 100.0 35 ............................... TCCTCCGGAGTCATGGTTGCATCCCCGGCTTGGCG 37497 31 100.0 35 ............................... GTTTCCAAGGTCGCAGCCAACGTCACCCGCATCAT 37563 31 100.0 37 ............................... GTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATG 37631 31 100.0 35 ............................... AGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAA 37697 31 100.0 35 ............................... TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA 37763 31 93.5 34 ..........GC................... AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG 37828 31 90.3 0 .............A.A.....A......... | ========== ====== ====== ====== =============================== ====================================== ================== 51 31 99.6 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : AAATGACGCGACTCAAGCCCCATGATGATTCTTGTCAGCTACGACGTCAGCACCAGTTCTCCCGGCGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGTGACCGTGGCCAGCGCGTGCAATTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAGCTATGCGACCTGATCGACCCGGCCCTGGACAGCCTGCGGTTCTATCACCTTGGCGCGAAATGGGAGACCCGCGTGGAGCACATCGGCGCCAAGCCCAGCCTGAACCTCAAAGGCCCACTGATTTTTTGACGCGAACCCCAAGCGCCCCATAAAAACCGGGCAGGTTCGCAGTCTCCTCAAGCAACTGATTTGCAACAAAAAAATAAATAGACAGCGGATTCACGGGGCCGCATGACGACTTCTCGACTGCTTTTTTCAGCAAGTCCGCGCAATTGCCCGTGTTTTAGCAACGATGGCAAACACTTATGCTAAGGGGG # Right flank : CACTTTAGACTCGCCCGCCAGCCGGACGCTGACCAGGTGCAGGTTGGAGACGCTTGAGGCCTGCATGTAGCACGGATCAATACGCACGCAGATCAAAAATTGGGCTCCGTCCATCAACGCTTGAGCACCATTATTTGACGATGATCGTCTGAGGCGTGCCTGCAAGCTTCCCGTCCACCATCACCTGCGCGGTGTAGGTGCCGGCCGGCCAGCCATCGGGCTTGCTGAAGCTCAGGTTGGTGGTTTCGGCACCGGTGGTGTTCAACGTCGCGTTCTGTTCGCCGGCCACCTGGCCATCCTGGTAGGCCAGCTTCGCCGACAGGGCCACGTTGCTCGCGCTGCCGTCGGTCTTGACCGAGACGATGATGGTGTCTTTGCTGCCGACACTGGTGGCCGGCGTCACCGTCTTGTCGGCTGCGGCCTGGGTGCCGACGGCCACGCTGGAGACCGTCACTGCACTACCCGTCGCAGCGCCGCCATCGGTGCTGGCCGCTCCGGTG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //