Array 1 126777-125101 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGSS01000009.1 Gottschalkia purinilytica strain DSM 1384 CLPU_9c, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 126776 30 100.0 35 .............................. CCACACATACCGTCTATCTTTTCATCCGTATCAAT 126711 30 100.0 36 .............................. CTGCACCACGAGCGATTACCCCACCAATGCCATAAT 126645 30 100.0 36 .............................. AGTATAATGGTACCTGAAAAAATTTATGCAGGAAAA 126579 30 100.0 36 .............................. GGAGAATGGATAGAAGCAGAACCATTGATATTAAAG 126513 30 100.0 37 .............................. ATATCTAGAATTAATTCGATTTAAGGAAATAGGAAAG 126446 30 100.0 37 .............................. GGTAAACTTATAGGAATGGATAAAAGATACTGCTTAG 126379 30 100.0 36 .............................. TCGTTAACCCATTCTTTTCCCATTGTTTCAAATGAA 126313 30 100.0 36 .............................. GGATTTGTTGGTAATTTTTTAGAATCTTCTAAGCCT 126247 30 100.0 36 .............................. TAAAGGATTTATTAAAGGACTAGATGATAGTAATAA 126181 30 100.0 36 .............................. CTAGCAAATAAAAAGACACCTCAAGCTAAACCTATT 126115 30 100.0 35 .............................. TCTTTAATTATACTATATATTGTTTTCATTATTCT 126050 30 100.0 35 .............................. TCTATAATTTTTTGCATATCTCCCTTAATATACGA 125985 30 100.0 36 .............................. ACTTGCAGATGAAAGATATAGAGACTTAATAAAAAT 125919 30 100.0 37 .............................. TTGTCATTTACAGTTACAGCGTGTGGAAGTAAATTCA 125852 30 100.0 37 .............................. TTTTTATATTTTAATATACCATGTCCTTTACCTTTTA 125785 30 100.0 35 .............................. ACTTAAAAACGTAAGTAAAGAGCTTGCAGTGCAAG 125720 30 100.0 35 .............................. GATTGCAAGGAAGCTTGTGACGATTTTAAGAAAAT 125655 30 100.0 36 .............................. CTTCTCTTAAATAAAGTTTCAATGCACTCACTCCTA 125589 30 100.0 35 .............................. TTGCTGTTATATCCACTATTCTAGTTGCTGAATCT 125524 30 100.0 35 .............................. ATATAAATAAGCAGCATGTAGATAAGCTAGTAGAA 125459 30 100.0 36 .............................. AAGTTAATCAAAACTATCACTCCTATGTTTTTGTTA 125393 30 100.0 36 .............................. TTTGCTAAACTCGTAATATACATATTGTCAGCAATT 125327 30 100.0 36 .............................. TTTCGTGTATATACTTCTTCTATCTCTGTAATTCTA 125261 30 100.0 35 .............................. ACTGGTCATTTCTATTTAAAAAATCATCTAATCTC 125196 30 100.0 36 .............................. TTAGGAACTTTATCCATCATTCTTTTTAAAATAACT 125130 30 96.7 0 ............T................. | ========== ====== ====== ====== ============================== ===================================== ================== 26 30 99.9 36 GTTGAACAGTAACATAGTATGTATTTAAAT # Left flank : AGTTTGTTCCTTTCAGCTTAAAGGAGATGTATTAAATGTCAAAGAACTATAACTATAATTATGTTTTTTTATTTTATGATGTTTCTGAAAAAAGAGTTCAAAAGGTTTTTAAAATATGTAAAAAATATCTTATTCATCATCAAAAATCAGTATTTAGAGGGAGTATCAGTCCTTCAAATCTTATAAAGCTTAGAAATGAACTGAAGAGGACTATATTATCAAGTGAAGATTTTATATCAATAATAAAGCTCATTAATAAAAATAGTTTTGATGAGGAGACACTAGGAACAGATAATAAGAAAAGTGAAAGCTTATTTATATAGAAAATTTACCAGCCGTCTATATATAATAAATAGTTATGAATATTGAAAAATACAAGTTTTTTCATGTGAAATGTTTTTATAATTAAATATCACTACGAGCTTGGTAAAAAATAAAAAGATATTTAAAATTAGACAATATAACAATATACATAATTTTTGTATGTGTAATTTTCGATA # Right flank : GAATAGTAGTACATTTTTTAATAGTAGTTATTTAGGAAAATAGTAGTATGATTAGTATAAAGAGTAAAAGTCAAATTTATATACTAACCTATAAATTTTTAGTTAATTTAAATTATCTTCAATGAATTAGCAATAAATATAGAAAAGTAAATAACTAATAAATTGAAACCCTCGAAAAAATTATTTTCGGGGGTTTTTTATTAAAGCTAGATTATTTGATCCTATAATTTATTATAAGTATTGAAGAATGGTAACGTGAATGTATATAATGAAGATGTATATATAAATAAAGGATTATTTGATGAAATAACTATAAATTTGAAAGCATTCATTTCACTTATTTAATACATATTTAACAGATTGAAGTAAAATACCCTATATATTATCTAAAATTTCCTTCTTTTTAAACTAGAAATCGATAAAAAAGTAACATATATTTATATTGATGAAAAAATAATTAGATATTTTATATAAAAGATATATATAAATAATAATCTGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAGTATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 137525-135898 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGSS01000009.1 Gottschalkia purinilytica strain DSM 1384 CLPU_9c, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================================================================================================== ================== 137524 30 100.0 38 .............................. CCGTAGGTGGCAGTATACTGCATAGCTGGAATAGTAGT 137456 30 100.0 35 .............................. ATAATATGCAATAGAGTTAAGAAATATTTTTACTA 137391 30 100.0 36 .............................. TTTAGATACTTATTTAGATATATTAGAAAGGACAGA 137325 30 100.0 36 .............................. ATCAACTGGAAAGATGGTAAATCCACTAGGAGCTAA 137259 30 100.0 36 .............................. AGAAGCATTAAAAGAAGGAAAGACATTTTCGCAAAA 137193 30 100.0 35 .............................. TGTTGTTTTCTAAGTTTGAAATTCTTTCCTCATGT 137128 30 100.0 36 .............................. TGAGAAGGCTATAAAGAAAGCGAAAAGTATTCAAAA 137062 30 100.0 36 .............................. CATATTATTTGTAATGATTATGTTGATGAAGAGTAA 136996 30 100.0 37 .............................. ATGATGCAAAAGATAAACTAGAGTTAATTCCTCCAAA 136929 30 100.0 37 .............................. TAACCTTTATATTTTCTATCAAATTTAATTAAAGCGT 136862 30 100.0 34 .............................. TGAGTAACTTCCTGCTTATCTCTCCATGTCGTAG 136798 30 100.0 36 .............................. AAGGAGAATCCTTGATTTCTTTGATTGTCTGTTAAA 136732 30 100.0 35 .............................. TACTATCCGTAACAAGATCAGAAGTTCTCGCAAGG 136667 30 100.0 37 .............................. AGATGAATTTACAATTATTCGCAGAAGGAGGGGAAGA 136600 30 100.0 36 .............................. TTGCCCTCGATTGAGCTTGAAGGAATGTAGCATGTC 136534 30 100.0 35 .............................. CAGGATGGGAAGAACTGGGACATACGAGGATCAGT 136469 30 100.0 36 .............................. GATAAATCTCTAGCATCTGTATATAGTTCATATCTA 136403 30 100.0 36 .............................. TCGGCAGTCCCGCCACATTCATCTATTGCATCTGCT 136337 30 100.0 36 .............................. GAAGGTAAGCCAATTTGCTCCTTATATAATCGGTGT 136271 30 100.0 37 .............................. GATGGTGTTCTACACTTCTTCTTAGAGTTTAATTATC 136204 30 96.7 34 ..................G........... TTGGCAGAAAATGAGGACTGGCCTAAAGATTGAA 136140 29 76.7 35 A.....T....G.G-.........G.G... TCTTCAATCGAATCTGCTGTTCATTTTATTAACCA 136076 30 76.7 118 CC..........TG...C..T.....G... ATAGTACATAATATTTATATACAAAAGTTATACTTTGTGTTAAAATTAGACAATAAAAGTAGAATATATACATATAGTGTATTTAAATATTCTTTTTATAAACGAAAAGGATAGAAAA TA [136051] 135926 29 83.3 0 ......T.........A......AA-.... | ========== ====== ====== ====== ============================== ====================================================================================================================== ================== 24 30 97.2 39 GTTGAACAGTAACATAGTATGTATTTAAAT # Left flank : ATTTTAGATACAACTTTGACAGAAGAACTATTAAATGAAGGATATGCAAGAGAATTCATATCTAAGGTACAACAGATGAGAAAAAATAACGGATACGAAATGATGGATAACATAAACATTTACTTTAATGGAAATGATGATATAACTAAAGCAGTAGAAGCTTATAGTGATTATATAAAACAAGAAACATTAGCAATAAATATAGAAAAAGTTTCAGATGATAATTTAGAAAAACACAACTTAAATGGACATGATACAGGAATAAAGTTAGAAAAAGTGAATAACTAATAAATTGAAACCCTCGAAAAAATTATTTTCGGGGGTTTTTTACCAACTAATTAAGCTTGTAAATTGTTATTATCATTGAAAAATAGCAACTTATATGTATATAATATAGATATATTGTAAATAAAGGTTGAACTTGGTAAAATAATTAATAAATGTGATTATTAGCTGACTATAACACATAATATAAAATTATATTTGTGTAAATTACAGTA # Right flank : ATATTGACAGGAAAATTAATCAATGATATCCTTATTTTAGGATATAAATTAAAATTCAATTCTATTTATTAACAAATTAAGGAGAGAAAAATAATGTGCTTTTATCAATTAACTAATACAATCTTCCTAAAAAAAGATGTACATTATATTAAAGTTGGTGAAGTTATAGGACAATCTATAAGTAGACTCATGTTAGAAGACGATTATTTAAAAAAACTACATAAAGAAAGATGTTATAAGTTTTGTTATGACATCTTTTATCCTATAGAAAAAGGAGATAAAGTTTATAAAGCAGGAAAAGTATATATTTTTAATATAAGAAGTTTTAATAAAGAATTTATATCTAAAATAAAAACTTTACTTAGAAGATTAGATGATGAATACATAAAAGTATTATCTATAGAAGAAAAAGAAATAAAACGACGCCATATAACTAAGATATATACTAGAACACCAGTGATAACTACAGTTGAAGGTAAACCATGGATCGCAGGAGAAGA # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.31, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAGTATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //