Array 1 89229-94654 **** Predicted by CRISPRDetect 2.4 *** >NZ_NISX01000009.1 Lacimicrobium alkaliphilum strain X13M-12 contig9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 89229 32 100.0 32 ................................ ACCACCTTTTGCTCAATCTCAGCGCGCAAGGC 89293 32 100.0 33 ................................ TTTTTGCGCTCAAACAGAAGTGTTTCAACGCCT 89358 32 100.0 34 ................................ ATCTTTGCACTGGGCTGCCAAGTCTGCGGGCTCT 89424 32 100.0 33 ................................ TGGCCCGTTATCGGCGCAATTACTACATTGTTC 89489 32 100.0 35 ................................ TGCTGAATCCGGTGCCAATAAACTCTATTATGAAA 89556 32 100.0 35 ................................ CTTAAAAAAATGCCCGGCGAACCGGGCTAAAACTA 89623 32 100.0 33 ................................ ACTCTTATGGGTTTCATGGTTTCATCCTTTTGG 89688 32 100.0 34 ................................ TAACACCATGGCACATAGAGGGGCGTTATGTTAC 89754 32 100.0 35 ................................ CTTGATGACATACGCAACAACAACGGTATCAGCAC 89821 32 100.0 36 ................................ ACAAAACCACATAGCATCCTACATCCATGTAAGAGC 89889 32 100.0 33 ................................ AATACCCTGCGTTGCGTCGGCGCAGCCCTGACC 89954 32 100.0 33 ................................ CATGATGATTACCTTTTGGTTGCTATATGCAAC 90019 32 100.0 33 ................................ TTTGCCTTGCTAACTATTTTCATCTCCATTAGA 90084 32 100.0 34 ................................ TTTTTTACATGCGGTGTTTACCGCGCACCCCAAG 90150 32 100.0 33 ................................ CAAATTAACCCCGCCGTTGTCCGTAATAGTAGA 90215 32 100.0 35 ................................ CCGTGGTGGGCGTTAAGAAGTACCATTTTTAACTT 90282 32 100.0 34 ................................ AGAAATCTCTCCGTCCTGACCTTTCCAGCTTTCA 90348 32 100.0 33 ................................ TGCTAATAGGTCTTTACCAGCTTTGTATTCCTT 90413 32 100.0 33 ................................ TTCACCCCTGGTTTCAGCGGTTACCAGCAAGAC 90478 32 100.0 33 ................................ CGTCTACCCCTTTTGGGTTATGCGTTGGCGCTT 90543 32 100.0 34 ................................ TGTGCAATTACACCAGATTGAAAGAATGCCGTTT 90609 32 100.0 33 ................................ GTGTGCTGTGATTATAACAGTTTCGCCGTTAGC 90674 32 100.0 34 ................................ TGGAGCAGTCACCGTGCCGAAATTTAGCCGGGAT 90740 32 100.0 35 ................................ AAGATGAAAGGCGAAAAAGCCGCGCTTGCTAGGGC 90807 32 100.0 33 ................................ TTCTGCGTCTTCGGTAAATTCAAATCCGCATTT 90872 32 100.0 34 ................................ AGTGTCATACGCTGACATTATATCGTTTCCCCTA 90938 32 100.0 33 ................................ CAGGGTAACTGGTTTGCTGCAGCATGGGCGGCT 91003 32 100.0 34 ................................ AGGGCGTATCGGTTATTGAGTTCGACCTTGCCAG 91069 32 100.0 34 ................................ CTGGCTATATGCCAGCGGCAAGGTGGGTATCTGA 91135 32 100.0 34 ................................ TGTGAAGATGGGCCACTCTGCTTCGCTGATGTGG 91201 32 100.0 33 ................................ AAGGGTAACTGGTTTGCTGCAGCATGGGCGGCT 91266 32 100.0 34 ................................ AGGGCGTATCGGTTATTGAGTTCGACCTTGCCAG 91332 32 100.0 34 ................................ TGTGAAGATGGGCCACTCTGCTTCGCTGATGTGG 91398 32 100.0 34 ................................ AATCTGATCCTGCACATCAGGCAGCGTTTCACCT 91464 32 100.0 34 ................................ TGGTGATGAAGCGTGATGAGCTGCTCGAATCGAA 91530 32 100.0 34 ................................ AGACGGTTAGGCAAAGCAATCGAAGGACAAAGAA 91596 32 100.0 35 ................................ TACAGTTTTCGTTGTTGGCATGGTCGTTTGCTATT 91663 32 100.0 33 ................................ TGTCAATAACTGTACGCCGGGCGATTCAGAGCA 91728 32 100.0 34 ................................ TTTAATTCACATCGCGGAGAACGCAAATGACTAC 91794 32 100.0 34 ................................ CAGCGCGCCGGAGTCATACACCAGGTTGCCGGTT 91860 32 100.0 34 ................................ TGGCTCATCGCAGCACCTCGATGCGTGCGCGGTC 91926 32 100.0 33 ................................ CGCCGGAAATGCCAAGTTCCAAATCTTGCCCGG 91991 32 100.0 34 ................................ ACCTCAGTTTTGGTTTTGGATTTCCCACTTGAGG 92057 32 100.0 35 ................................ TGTGTCGCTTATCTTCTGTTTCCCAACGTATGAAA 92124 32 100.0 34 ................................ GTCTGCATCAACCTGCCCGGCGACTGCATCAATT 92190 32 100.0 35 ................................ AGCAAGAAAGCGCCCATCAATCACGCCGGGCTAAA 92257 32 100.0 34 ................................ TTTCTTCGGTGCTCGCCTGCTCACCTGCTAAATC 92323 32 100.0 34 ................................ CACGCTATCAGGCTGGAAGATTCCGTCGTTCTGC 92389 32 100.0 33 ................................ CAATGGTAACAGATCCAACGATTGAAGCAGCCG 92454 32 100.0 34 ................................ ACTGGATGACAGAGGAAATATTCCCTGAAATGGC 92520 32 100.0 34 ................................ TATCAGCGAATAGGCAATGAAATACACCTGATCG 92586 32 100.0 33 ................................ AGAACCGGCTACTTTTGACTCAACAGGTTATGC 92651 32 100.0 35 ................................ AACAAGAGAATGCGCCCATGCTCAAAGATACCCGC 92718 32 100.0 34 ................................ ATTGAAGACCGCGCAAATTTTACCAAGGAGTAAG 92784 32 100.0 34 ................................ AGCTACAGGGTTCACTGTTGCGGCAATGGTCACA 92850 32 100.0 35 ................................ TCAAGTCCCTGACCACCACTCCGACAGTCTGGATA 92917 32 100.0 33 ................................ GACATTTATCATGGCAGGAGTAAATCATTGCGA 92982 32 100.0 33 ................................ TTCTGCGTCTTCGGTAAATTCAAATCCGCATAG 93047 32 100.0 34 ................................ AGTGTCATACGCTGACATTATATCGTTTCCCCTA 93113 32 100.0 34 ................................ CATTTCCTGCACCAAATCATCAATCGCAGCCTGA 93179 32 100.0 34 ................................ ATCGCCTCATCCATGGTCATGATAGAGGTATCAA 93245 32 100.0 34 ................................ AGTATCGTTGAGCCGGTTACATTGCCGCCGCCTA 93311 32 100.0 34 ................................ TGGTCAACCTGGGCTACCTGGTGCCGCCCGTCTT 93377 32 100.0 35 ................................ CAAAGTCCCTGACCACCACTCCGACAGTCTGGATA 93444 32 100.0 33 ................................ GACATTTATCATGGCAGGAGTAAATCATTGCGA 93509 32 96.9 33 .......A........................ TTCTTGCCTTGCAAGTGCCGCTAACTGCTCTTC 93574 32 100.0 34 ................................ AGATCGTTGATTTGATCCAAGGTCAGAACTGCAG 93640 32 100.0 34 ................................ TTTGTAATCAGCACTCACCCGATAACGGTGCAGA 93706 32 100.0 33 ................................ AGCATTAAAGAGCGCGACGAGTTTGGTAATTTC 93771 32 100.0 33 ................................ AAACAATCAGCTTGTTGTGCAATGATTTTATTG 93836 32 100.0 33 ................................ CATGTGTAGCAGCATGTGATCGCCGTCTTTGTA 93901 32 100.0 34 ................................ CTGCTGGAGTTGTAGCCTCAGCACTCACAGCAAA 93967 32 100.0 34 ................................ GGGTTGCGCTGGTGGTTTAAACAGCAAGGGTTTA 94033 32 100.0 34 ................................ CGCTTCTGTACAATATATTTTAAGCAGAAATGAC 94099 32 100.0 34 ................................ CCTGATATGTATCAATGCAAGAATTGCGATCATT 94165 32 100.0 35 ................................ ACTAATAGGCGGCGGCGGACTTTCAATTCTAGCAC 94232 32 100.0 34 ................................ AGATAAAACAGGCTCAGATTGAGATGATTAGAAC 94298 32 100.0 33 ................................ TGTCCATATCGGCCAGGTAGCTTTTGGTCACCT 94363 32 100.0 34 ................................ AAGCATAGGAGCCAACACCTCTACAACAGTCGAA 94429 32 100.0 32 ................................ AGCGCCAGAACGACATGGTTGACGCTGCCGGT 94493 32 100.0 34 ................................ TCTGCAGGTTCAGGAGCTGGAACGCAAGTTAGCC 94559 32 100.0 32 ................................ ATCATTATCAAGTTGTTTAAACGCGGCTCTGG 94623 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 83 32 100.0 34 GTCGCCCCTCACGCAGGGGCGTGGATTGAAAC # Left flank : GCCTTTTTTAGCGCGATAAGGAGAGAGCTATGCTGGTATTAGTGACTTATGATGTGTCTTTTGACAGCGAAAACGGCAAACGTCGGCTCAGGCAAATAGCAAAGATCTGCCAGGATTACGGTATCCGAGTGCAATACTCTGTGTTTGAATGTGATGTTGATCCGGCGCAGTGGATAAAATTCAAGCAACAGCTTTTTAATGTATATGACAAAGAAGTAGACAGCTTACGCTTTTATAAGCTAGGCAAAAATGGGCAGAAAAAGATTGAACATCATGGCGCCAAACCCAGTTTTGATCTGTTCAAAGACGTTATTATTCTGTAACGCTAACCCTTAGTGCTCTTTAAAAACCCGGTAGATTAGCGATCGCCTGAATAGCCTGCGCAGGCTGGCATTGAACATATTCCTGTAGTGGGTTAGTGTTCTATGACGTGGTTTTGCTAAAAGGTTAGCGAAATCACTCTGTTTAGCCCTTTGCCAACGCGGCCTGCGGACTAAACT # Right flank : CAAGTTCGAATCTTGTATGCCCTACTCTGTCAGCGTTGGTATTCATTGCAAATATTATGAATACAACTGCTTAACCCAGGGCAGTACTTCTTCCTGTGGTTCAAGGGTTTCACAGGCATCTACTTCAAATAGCGAGGTTTTTGGGCTGCCCTGTAGCTCTTCCAGTAACCCATAGATATGTCGGCCAGCACCGCAGTAGGATTCGCCGTAACTGCTGTCACCCAGTGCCACAACCGCAAAGGGGCGACCATCCAGTAAAGGAAAGCGTGACTCCATATCCAGAATCAGCCCTTCCAGATTCGGTGGTACATCTCCTTGCCCGGTGGTGGAACTGATAAACAAAAGTTCATCGGCCATCTGCACATCGTCCAGTTTTGGGTCATCAAACAACTCAGCCTTTACGCCCAGTTGTTCTAACTCTGCCTTCACATCTTCTGCCAACTGCTCAGCGTTGCCATACACACTGCCATAAAAAATGCTTACTCCGGACATTTACACTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACGCAGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.90,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //