Array 1 1149706-1151016 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP055315.1 Klebsiella grimontii strain RHBSTW-00555 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1149706 29 100.0 32 ............................. ACCGATTCCCGGAAAACATCGATGGGGAGGGC 1149767 29 100.0 32 ............................. CGGTAAACCGAGGCGATCACGCATTGCCTCTT 1149828 29 100.0 32 ............................. GGATTAAGCTGATTCTGGCTGACAGAACAACG 1149889 29 100.0 32 ............................. GCTTAATACCAGAGTATGGTAATAAATCCGAT 1149950 29 100.0 32 ............................. CCGCCTACCACATCTTTCACGTTGGCCGGAGT 1150011 29 100.0 32 ............................. CCGTCAGGCTGCATTTGAAAAGTTGGAGCGCG 1150072 29 100.0 32 ............................. ACCAGGTGACTGCGGATAGCCAGTCAGGCAGT 1150133 29 100.0 32 ............................. CTCAAAACCGTGTCAACAAAAAAAGTGGAAAT 1150194 29 100.0 32 ............................. AATGCGGGCCCGTGGGTTCTGGCTCAGGATGT 1150255 29 100.0 32 ............................. CCGACACCTACAGTGAGGTGCGTCCTGCGCAG 1150316 29 100.0 32 ............................. TCGGTTGCCGTCTGAATATCAGTAGCAGAACG 1150377 29 100.0 32 ............................. ACACGATACGACTCACCAGGTGAAACGGGTAT 1150438 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 1150499 29 100.0 32 ............................. CCACCGGTCTATATTTCAGCTGATTATGACAT 1150560 29 100.0 32 ............................. ATAGTTTTGTGGGTGCTAACAGTATTCCGGGA 1150621 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 1150682 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 1150743 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 1150804 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 1150865 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 1150926 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTTTGCGAAT 1150988 29 86.2 0 ............TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 22 29 99.2 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : ACCTTTGCAGAAAAAAGCGCTTGAACTGGATATTGATAAAGAAGGTCCACAATTATTTATTCTTGAAGATGTGACTGGCGCTGGAAAAACGGAGGCCGCGTTGATTTTGACGCATCGTCTGATGGCTACTGGAAAGGCGCAGGGGCTCTATTTTGGTCTGCCGACGATGGCGACGGCGAATGCCATGTTCGATCGTATGTCGGAGAGCTGGCTAGCGCTGTATCAACCGGGTTCTCGGCCAAGTCTTGTCCTGGCTCATAGCGCGCGTGGATTAATGGATCGTTTCACGCAGTCTCTCTGGTCGGGAGATTTATCAGGTTCAGAAGAGCCTGACGATCTTCTGCCTTCCAGCCAGGGGTGTGCCGCCTGGTTTGCCGACAGTAATAAAAAAGCGCTGTTAGCTGAAGTGGGCGTTGGTACGCTTGATCAGGCAATGATGGCGGTGATGCCGTTTAAACACAGTAATTTACGGATGCTGGGGCTGAGCCATAAAATTCTGT # Right flank : GGTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTTATTATTTAGTGTGGCAAAGTCCAGTTCGAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1900430-1901495 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP055315.1 Klebsiella grimontii strain RHBSTW-00555 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1900430 29 100.0 32 ............................. CGCGACGAGTGGGACGAAACGCCGCCGATCCA 1900491 29 100.0 32 ............................. GTCCCCGATGGTAAGGGCGGCGATGGCATGGA 1900552 29 100.0 32 ............................. ATGCTGATTGGCTGTTATGTAGAGATGGCAAA 1900613 29 100.0 32 ............................. CCCCGCTGATTGTCCTGTCACCACCGCCATCA 1900674 29 100.0 32 ............................. ACCGAGGGTAATCATCGTTTAGCAGAACGTTA 1900735 29 100.0 32 ............................. CTAGCAATACGAAAGGTGGAAACCTTTTGCGC 1900796 29 100.0 32 ............................. GGAGAGGCAGTCGAAATTTATTAACGCAATGC 1900857 29 100.0 32 ............................. GCAGTGACGCCCAGTCCAGCGTCACGGTATAG 1900918 29 96.6 32 ............................A ATGCTATTATGGGTGATACCGATAATATTTCC 1900979 29 100.0 32 ............................. CGTACCCGGTTTATCAGGCGTGCTGGGCTTAC 1901040 29 100.0 32 ............................. GTGTCTCCATCCATAAGAACGAAGTGAGTGAC 1901101 29 100.0 32 ............................. TTCTTTTGAGCAATACTACCTGAACCGTAAGG 1901162 29 100.0 32 ............................. GGAGCATTTAAAAATCTGCTGCTGCACGCACC 1901223 29 100.0 32 ............................. TGCGCGCGCTTCTTCTTCATCCGCTCCTTTGG 1901284 29 100.0 32 ............................. GACTTATAGCCATCGCCCATGTCGAATACCCA 1901345 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 1901406 29 96.6 32 .............T............... AACAGCCCACAAAACTTTTTGCATGGGGCCGC 1901467 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================ ================== 18 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //