Array 1 41278-42402 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADCNT010000011.1 Klebsiella pneumoniae strain KCJ3K696 NODE_11_length_156303_cov_10.900279, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
     41278	    29	 100.0	    32	.............................	TAGCTCCGAGGCTTCTTCTGCCTCGAATGCCG 	
     41339	    29	 100.0	    32	.............................	CGCCTTTTCCGGGGTGTTCGCTGTGCAGACCT 	
     41400	    29	 100.0	    32	.............................	ATAAATGCTCCCATTTGGCTTGAGCACACGGC 	
     41461	    29	 100.0	    32	.............................	AAAACGATCCTATTTCCGGGATTGCCACCGTG 	
     41522	    29	 100.0	    32	.............................	ATATCTATCGCCTGCTGGAGATTGGCCCGATA 	
     41583	    29	 100.0	    32	.............................	TGAGTCGTCATCAAAAATTGCGTCCATCAGGG 	
     41644	    29	 100.0	    32	.............................	TTCACTTGCCACCCCTCCCCAGGCTGGCGATC 	
     41705	    29	 100.0	    33	.............................	TCACTACTGCAGCCGCCCTCACTGCAGCACCGC	
     41767	    29	 100.0	    32	.............................	TGATCATGCCGCCTGGTGTCGTAATTTTTCGC 	
     41828	    29	 100.0	    32	.............................	GACGGCGAGAGCGTGTTCAACCTCAACACACT 	
     41889	    29	 100.0	    32	.............................	AAGTCGCATTTGTTGAGGCGCTTTCAGTCGAC 	
     41950	    29	 100.0	    32	.............................	TACTCCTCGCCGATCATCGCCGGAATAACGAC 	
     42011	    29	 100.0	    32	.............................	TTGTCATTGTGTAAACCTCGTGGTTTGTTGGT 	
     42072	    29	 100.0	    32	.............................	TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 	
     42133	    29	 100.0	    32	.............................	ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 	
     42194	    29	 100.0	    32	.............................	GTGATCGTCATGGATATCACTGCCGTTCCGTC 	
     42255	    29	 100.0	    32	.............................	CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 	
     42316	    29	 100.0	    29	.............................	GGGTTCACTTGGGTGAAACTGAACTAACT    	
     42374	    29	  75.9	     0	...........ATTC...A......G..C	|                                	
==========	======	======	======	=============================	=================================	==================
        19	    29	  98.7	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT
# Right flank :  CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTGATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//