Array 1 298971-299365 **** Predicted by CRISPRDetect 2.4 *** >NZ_BADZ02000006.1 Gluconobacter frateurii NBRC 101659 strain NBRC 101619, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 298971 29 96.6 32 ............................C AACTGCGCGATGTTCTGAATGTCAGCGGTTTC 299032 29 96.6 32 ............................C TCGATTCCCGTCATATCCGCGTTCGGGCGGTC 299093 29 96.6 32 .....................G....... CAGAAGCCGGAACCAGACAATGGCGTGGTCGG 299154 29 100.0 32 ............................. GTCTTGGCGGCTTCCGGTACGGTTTCACCCAT 299215 29 100.0 32 ............................. TTCGCCTGGTCGTGACCCGCCAGGACGATATC 299276 29 100.0 32 ............................. CAGTACTGCCAGGTGGCCCAGGTGTGGCGAAG 299337 29 86.2 0 ..............T...........ATT | ========== ====== ====== ====== ============================= ================================ ================== 7 29 96.6 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GTAACCGTTCCCGGTTATACCGGAGCGCTGCTTCCTGCAGGACGCGGATCATGGGAACCATGTGGTTACCCATGTCCCTGATGCCTGCGAGTTCCCGATTGCTGGCGGAAAGCAGGGTTGCCACCGAACCAAAGCGTTCCAGAAGTGCTGGAACGAGGGTGTCCACTTTTTCTTTACGGCCCGTAAAAATCTGAACGATCAGGCGTAACAGAGTGTCATCGTCCAGGCACCGTCCCCGCCCGCTCAGAAGGGCAACAGGGGGCGGAATATGCTCGTTGTTTGTCGGCTGTGGGTTGATGGAAAATGGTGCGGTTTGGAAAAGGATTTTTCCTGAGTATTCAGCAAACCCATCATCAGAGGCCGGAGCATTAGTCATTTGTTTTTCTGGCACTGTAAGGCGAAGAAGATCAAGGTAGCACCGGCCCTCAAAAAAGCTTAAAAAATCGGTAGATTTTTCGAGGGCTGTTTTTCCTTTGGAAAACAGCTATCTAACAGGAAGA # Right flank : TTACAGGAGGCCTTCCTGTCTGAGGCTGCTGAGAGTTGCTGTTTTGGTGCTGATAAGGACATCATGCAGAACAATGGAGAGTGGCCTGAGAGCGTTTTCCAATGTTCGTGCGGCTGTTGAGAGGGCTGGTGCTCTCAGGGCGGGCTGGACGTGTACGCCGATGATGGCTGTAGCGTGCAGAGCCAGGGCGCGAATGGCGATGGCGCGGTTCAGGAAAGTAATATCTTCCTCTTCGGGGGCAGCTTCATCAGCGAGAAGCCGGTTGCGGTTATCCAGATAGAGAACGCGAAGCTGTCCGGCGACTGCGCTTTTCAGTGCTGTTTCAAGGTACTCTGTCAGTTGGGGCCAGTTTCCCAGAATGGGGCGTTCACGGTGTTCCGCTGAAGCGAGGCGTTCTGCGGCGACTGATGGCAGACGAAGGGCTCGGATGGTATCGTCGTTCAGGCCGGCATTTCGCAGATCCCGCGTTGGCGCACGGAAGACGTTGATGAGACTTCCGA # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 175252-175524 **** Predicted by CRISPRDetect 2.4 *** >NZ_BADZ02000005.1 Gluconobacter frateurii NBRC 101659 strain NBRC 101619, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 175252 29 100.0 32 ............................. TACCATCTGTCTGAGAATACAGCGGGCGGTGG 175313 29 100.0 32 ............................. TCCGCCTGCTGGACGGAATTGTCCGCGTCGGT 175374 29 96.6 32 .............G............... ATACCTAACGAGCAGGCCAGATCGGCACTATG 175435 29 89.7 32 ...........A.GT.............. CTGGTGATCCCTAGGACATAGCAGACGGCCGA 175496 29 69.0 0 A..........A.GC........ATT.TC | ========== ====== ====== ====== ============================= ================================ ================== 5 29 91.1 32 GTGTTCCCCGCGTAAGCGGGGATGAACCG # Left flank : CGGGAACTGCGCGTTCCATTCCGGACGGCCCATCACGTCACGGGGCGTCTTGTAGGTCTGGCGGAACAGCGTGGTTGTGATCTGGCGGACCTGTCTCTTGAAGACATGCAGGCCGTGGAACCGGGCATCAACGCCGGCATTTTCGATGTTCTAACGGTTGAAACTTCCCTGGCGTCCCGCACCAGTCTGGGCGGAACCGCTCCATCCAACGTGCGTCAGCAGGCTCAGGTCTGGCTGGAAAAACTTGGAGACGCTGCATGAGACGTTTTCTGCTTGTTGGCCTGACCCTCGTAGCACTTGGCACCGGCCTGAGCGCGTGCGGAAAGAAAGGGGCTCCTCACGCCCCCGGCCCGGCTTCAGACATCACCTATCCGCGCAGTTATCCGCCTGAATAATTGACGTTTGCAGGGATCTGTGAACGCGTGAAAAACAGCCTGTAAAAATCGGTAGATTTTCAGGAATGGAAATTCTCTTTCTGTATCAATATGTTGTCAGGAAGA # Right flank : CAACTTTGAAACGCTACGCCGCTTTTTCAATCTCAGACATAACAGGGGTATGGCCGCTCCCGGCGAGTGGCTACGATCAGCTATCCCCCAGCGCTTTAACCACCAGTGGGTGCTGCAGCACATTCTCTGCAGACCACCCCAGCGCACGGAGGACACGTATCCCTTCTGCGCCGTCACGTTTGGAGAGCTTTTTTCCCTCCTCATCCAGAATGAGGGCATGGTGTCTGTAAGCAGGTTCAGGCCATTTCATCAGAGCCTGAAGCACACGATGAACGGATGTGGCAGCGTAAAGGTCTTGCCCTCTTGTGACGCAGGTTACACCCTGAAGGGCATCATCATGGGTCACGCACAGATGGTAAGATACACCCGTGTCTCTGCGCCCCAGAACGATATCGCCAAATTCATCAGCGCGCCCTGCAATCCGCCCCTGCCCGACTTCATACCAGGACGGCACACCGTGGGTTTCATTCAGGGCCCGTTCCATGTCGAGCCGCCAAACC # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTAAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 247649-247921 **** Predicted by CRISPRDetect 2.4 *** >NZ_BADZ02000005.1 Gluconobacter frateurii NBRC 101659 strain NBRC 101619, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 247649 29 100.0 32 ............................. GCCCTGAGCGGCCTTGGTAATCTGTCTGACCT 247710 29 100.0 32 ............................. GCCGCAACGTGACCGCTCAGCTGGGTGCCAAC 247771 29 100.0 32 ............................. AGCAGGTGAGACGCATCACACCCGTGGATGAT 247832 29 100.0 32 ............................. CGTCCAACAGCCCGAACGATTTTCCGAGCTGC 247893 29 89.7 0 ..............C........A..G.. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.9 32 GTGTTCCCCGCACATGCGGGGATGAACCG # Left flank : TGATCGAAGACGTTCTCTCCGCAGGCGGCCTCTCCCCTCCCGAAACACCGGAAGAAGCCATGCCCGTGGCCTTTGAAGACCCGGAAGGATTGGCCGATGCTGATCATCGTGGTTGAAAATGCCCCACCACGCCTGCGAGGAAGGCTTGCCGTCTGGCTGCTGGAAATCCGTGCAGGCGTTTATGTCGGAACTTATGGCAGAAAAGTTCGGGAAATGATCTGGCAACAGGTCTGCGCCTATATCGACAGCGGCAATGCCGTCATGGCCTGGGCCGCCCCGAACGACGCTGGATTTGAGTTCGATACCTGCGGTGCAAACAGACGTTGCCCCGTAGATCTCGATGGATTTCGCCTGGTCGAATTCGGCCCCGAAGCAGCCCTCCCCCTCCTGCCCGGCCCTCTTAATTCTCCCAACCGAAACAGGCGTTAAAAACCCTTTGAAAATCGGTAGATTTTTGAAGTGGAAAAATTCCTTTCTTAATCATAAACTTGCACACAAGA # Right flank : GTCAGAATCAGATCTGTAATACCTGCACAAGCGTTACTACCCTTCCCACATATCCTTGCAGACAAGGAGACGCCCCATGAGCAAACTCACAAAAGAAGAACGGGACAGCCTACCTGACGATGAATTCGGGCTCCCTGAAAAACGGGCCTATCCTGTCGATACCAAGGCACGAGCACGCAATGCGAAAGCCCGCGCTACGCAGGAGCTAGAACGGGGGCTTCTCACACCGGAAGAGCGGGATGAAATTGACCGTGCCGCAGATCGAAAACTGAACGAAGACTAGCCAGAATCAAAAACGGCCCCGGATCACTCCGAGGCCGTTTTCTCTCAACACCTAATCAGTTCGCCTGCGAGGCTCGCAGCGGGGCATCAGCAGGAACATCCTTGAGCGGAATCCCCTGATACTTGCCCGTCAGGGTCTTCAGGAACGCCACGATGTCTGCAACATCCTGGTCGGTAATATCATGATCCGGCGTTTCGTAACGTGCCATGGCACGCAC # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCATGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //