Array 1 56677-59607 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFHK010000025.1 Intestinimonas butyriciproducens strain GGCC_0179 NODE_25_length_59628_cov_400.959512, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 56677 33 100.0 35 ................................. AGATCGGCAACTTGACGGACTGCGGGTGCGGCTCC 56745 33 100.0 34 ................................. TGGTAGCTCACTTCCGGTACTCGCCGGTGCCGGA 56812 33 100.0 36 ................................. CGTCACCATCCCGGAAACCGAGCTGACCGGCGAGAG 56881 33 100.0 35 ................................. ATGTTGAAGTAGCCGGTGGTGGTCTGCTCGTTGCT 56949 33 100.0 33 ................................. CGCTCTGGGTGGGAACAGCCGCAATCGAGGCCC 57015 33 100.0 33 ................................. TTCTTGTTTACCCGAATGCCCATAGCCTCAAAC 57081 33 100.0 34 ................................. ATAGAGGGCGCCGATGTACTGCTGCACCTCGTCA 57148 33 100.0 34 ................................. CGGGAAGCCGTCACCATGGCCGTGAACCTCGGCG 57215 33 100.0 33 ................................. GATATGAAGGGTATTGATCCTCATTTGACACAC 57281 33 100.0 33 ................................. GCAGAGCCCGTCCTGGAATGGCTATGATACCGG 57347 33 100.0 35 ................................. TCCGGAGACCGGAAAAATCTATGTGGATGTGCAGA 57415 33 100.0 34 ................................. AGCAGCTCGTTCTCTCGGTCGATCAGCTCGCCCA 57482 33 100.0 37 ................................. TGGTGAACCCCAGCATCAAAACATCTTTTGTATCTGC 57552 33 100.0 35 ................................. ACCGGGTGAATTCGACACCATCATCGTGGACGAGT 57620 33 100.0 33 ................................. AATGTTTTTGCGCGTAAGGCTGTGAGGGAGTAT 57686 33 100.0 33 ................................. ATAAAAATCTCTATGGTATTGTCTGCCCCGTAT 57752 33 100.0 34 ................................. ATGGAAACCCTCGTGGACAGCCCCCGGCTCTGCC 57819 33 100.0 36 ................................. GCCCAGCGGCTCCAGCAGGATGGCGACGTCCTCCTT 57888 33 100.0 33 ................................. AACACGGTATTCAAGGACGCGGCTGTTTCCACG 57954 33 100.0 36 ................................. AGCACAGCCGCCAGCGCCTCGTCCTGGGCGTTCCAG 58023 33 100.0 35 ................................. AGTGCCGGCAGCGTGGTCAGGGCGTTGGCCTGAAG 58091 33 100.0 35 ................................. GCCTGGTTCGCCGGGATGCTCTGGCAGCTGGCGGA 58159 33 100.0 32 ................................. CTCGACGCCAACAACCAGCTCCTGAGTATGCC 58224 33 100.0 37 ................................. ATGGTAGGATACCTCCTGTATCTAACTTTGAAGGGAG 58294 33 100.0 33 ................................. CTCCCGCTGGTTAAAACAAGCCAGAAATTTCGG 58360 33 100.0 34 ................................. TGGAAGGGTACGGCATACATGCTGGGCAGGGATT 58427 33 100.0 34 ................................. CACCGTGCAGAAGCTGGAGGAGGCCGGACTGGAA 58494 33 100.0 36 ................................. AAGGTCCGCGTCAAGGGCAGCACCATCACGGACGTC 58563 33 100.0 34 ................................. TTGTCTGCCTCTTCCAGCGAGGTGAGCGTCTTCT 58630 33 100.0 34 ................................. GCTGGAATAAGCGGAATAGATAGATCCCTTTCCC 58697 33 100.0 33 ................................. ATCGACTACGCCGGCCCGGACCGGACGGGTTAC 58763 33 100.0 37 ................................. TGTAGTGAAGCGCATCGCAGCCGCGGGGATCGGCTGT 58833 33 100.0 33 ................................. AGAATGGGCATATCACAGTGCGCGTCAGCCCCT 58899 33 100.0 34 ................................. TCTGGCAGGTGCCGATCCAGAAAATCCATCACCG 58966 33 100.0 36 ................................. AGATGTCCAACGCGGGCCTGAGCGGCAGCGCGATGG 59035 33 100.0 34 ................................. GTCCGAGACGACCACGGCATGCGGATTACACAGA 59102 33 100.0 36 ................................. GCTTGTCCGCGTCCATCGCTTACGACCGCATGGCGG 59171 33 100.0 34 ................................. ATCAGCTTGCGGAGCCGGTCAGGGACACGGTGAG 59238 33 100.0 34 ................................. CTTGAACTGGGGGCGGGACCCAACGATGCCATCC 59305 33 100.0 36 ................................. CTCCCTGGCAGACGGCCTGGAGGCGGGCGAGAGCAC 59374 33 100.0 35 ................................. AAAAGCTATCAGAAAAAGCGGCGGCTGACCAGCGC 59442 33 100.0 33 ................................. ACGGAGAGCCGGAAGGACCTGCGGGATGCGGTG 59508 33 100.0 34 ................................. GGAAGAGGGGGCGCGGCGCTCATTCCTGCGAAAG 59575 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 44 33 100.0 34 GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Left flank : ACTTGGACGCTTACCCACCTTTTTTGTGGAAGTGATAGTATGCTGGTTTTAATCACCTATGATGTGAACACCGAGGACGCCGCTGGCCGCAAACGTCTGCGGCAAATCGCGAAGCAGTGCGTCAACTACGGACAGCGGGTGCAGAACTCTGTCTTTGAATGTCTGCTGGATGCGGCCCAGTGCCGCATGTTACAGGCAAAGCTGTGTAAGATCATGGACCCGGAAAAGGACAGTCTTCGTTTTTATTACTTGGGAAACCGCTATGAAAACAAGATCGAGCATTTTGGAGTAAAGGCATCCTACAACCCAGAAGATGTATTGATGCTTTAGGTGCGAAACGTAAGCGCGCAGAAAATCGCCGAGGTCTCGCACCAGATTTTGCAGTATTATCTGTAAGGAGGCAACCTTATTTTTCAAAATCGGATAAGAGTTAGAAGAGGATATTTGTAAGAATTGTCTATTTTTCACGAGTACAGATTGAATTTTTAGCTGTTTTTGCT # Right flank : CCGGAGAGCTGGATGTTGAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.50,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.01,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 23-3498 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFHK010000052.1 Intestinimonas butyriciproducens strain GGCC_0179 NODE_52_length_3518_cov_374.616229, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 23 33 100.0 34 ................................. CCGGAGAGCTGGATGTTGAATTGAGGGGCGAAGG 90 33 100.0 33 ................................. GCCTTGGAGGTGGACGAGAAGCGGAGCCGGGGG 156 33 100.0 34 ................................. CTGACTCAGCCAGGAAGCTACACCCGAACAACGT 223 33 100.0 36 ................................. TTTGATGGACAGACGGCGGAGGTCGTGGCGGCCATG 292 33 100.0 34 ................................. AGCACCTGCCCGACGGTGAGACGGCCTATCACGC 359 33 100.0 34 ................................. GCTTCCGCCTCTGCCTTCGCCGCGTCGATCTTTT 426 33 100.0 36 ................................. AAGTATACGCTGAAGGACGACTTCGTGCGGACGGTG 495 33 100.0 33 ................................. GTGGAGATCCTGGAGCTATGCCTGGAGGCTGCC 561 33 100.0 33 ................................. AGGGTATGCATCAGCTTGTCCCCTTCAAGGGCG 627 33 100.0 35 ................................. CCGGAACTCCTGCCAGGTCTCGCGGGCACGCCCCC 695 33 100.0 35 ................................. AGAAGGAGGCTCATCGTAAGATCACCACCTTGTCC 763 33 100.0 34 ................................. CCCCTCGCTATGGGGCATGGAAATGATGGAAAAC 830 33 100.0 35 ................................. TTTGCCTCCCGGTGGACCAGCCCGCCGGACCGGAA 898 33 100.0 35 ................................. CTCAGTCGAATTGAGGAAGGCGGGATGCAGATCCT 966 33 100.0 33 ................................. TGGTATGAGCCGGATCGGGAGAAACTGGAGCGG 1032 33 100.0 36 ................................. GAAGGAGAGGATCAGGGGCAGCAGTGTGGGTTTCTC 1101 33 100.0 34 ................................. GTCAAAGGTGCGACGGTTGCAACAAAATGCATAG 1168 33 100.0 34 ................................. GTGGAGATCCTGGAGCTATGCCTGGAGGCTGCCG 1235 33 100.0 35 ................................. GTGGGGACCACTCCACGGGCCCGGCACCTCCTTTC 1303 33 100.0 35 ................................. GCCTTGGAGGTGGACGAGAAGCGGAGCCGGGGGAC 1371 33 100.0 35 ................................. ACGGGCGGCGTGGAGCAGGGCGGGCACCTGGTGGC 1439 33 100.0 35 ................................. TCCAAAAAGGCCGTCAGCCGCTTCGGCTCCTCGCT 1507 33 100.0 36 ................................. AGTTCCACCGTGGGGATGTCCATGTTGAACAGGCCC 1576 33 100.0 34 ................................. GTGCTCCGCCGGTCCAGGAAGGAGGGATGGGAGA 1643 33 100.0 34 ................................. GGTCATGTGTGTTCCTCCTTGGGCGGGTCCGGCA 1710 33 100.0 36 ................................. GGGTCGCACGCAATCTATCCTTAAACACAAAATCCC 1779 33 100.0 33 ................................. CCCCCTCCAGGGGCCGCTCCGGCTTATGTCCGG 1845 33 100.0 35 ................................. TCAAACGATAGTCGTGGACGAGGCGCATCACGTAC 1913 33 100.0 33 ................................. AACCCCCTGGACGGGCAGGGCTGTAAAAACGAG 1979 33 100.0 35 ................................. ATAAAACCGCGGCGGCTCGCCGCCCCGCTGCGCCC 2047 33 100.0 35 ................................. ATAAGTAGCGAGAGGTTACTGTTTTGGGAGAACAC 2115 33 100.0 34 ................................. ATAAGACAATGGAACCCCATCACAGATTTCTTTC 2182 33 100.0 36 ................................. TTGGCGTATCTGCGGGACGCAGAGGAGCGGCACCGC 2251 33 100.0 35 ................................. TGTCCCTGCACTCCAACGCCTGCGGGACGGAGAGC 2319 33 100.0 36 ................................. AAGGAGTCAGTCGCCGAGTACCGCAAGGAGGAGAAG 2388 33 100.0 35 ................................. ACCCGGTTCCATACCCTGTATACGGCCCCGGAGCT 2456 33 100.0 33 ................................. CTGGAGGCCCACACGGGCGAGGCGGTGGAAGTG 2522 33 100.0 33 ................................. ACCCGAAAGGATATGACTTTCCAGGAGGCCGTG 2588 33 100.0 33 ................................. CATCTTCAGGGCCCAATTGGTCAGGTCGCCGCT 2654 33 100.0 33 ................................. GGCTTTACGATAAACCGGGTGCCGAGTATAATC 2720 33 100.0 34 ................................. TTGGTATGCAGCATGTAAGCTGGGAATTGGTAAA 2787 33 100.0 34 ................................. CATTTGGGTGAATCCTGTTTTTTCTCGGGCTTTT 2854 33 100.0 36 ................................. ATTTTATCGGAATTGGTATAGGACGCTAAACGGATA 2923 33 100.0 35 ................................. TGATAGGGAAAGCCCCTCGGCTCAGGCCGGGGGGC 2991 33 100.0 35 ................................. GTGACGAATGTTGAAATATCGGGTCTGCCGGATAC 3059 33 100.0 35 ................................. GCTGGCACTCAATGGCAGCCGATTTATTGGATCGG 3127 33 100.0 37 ................................. GTCAGCAAGTTCCGGAAAACCGCGCTAGAATGGGAAT 3197 33 100.0 34 ................................. AACGGCTATGGGTGTGATTGCGCTGTTGTTTCAA 3264 33 100.0 35 ................................. GCAGAGGCTGGGTTTTATTTATCAGGCGGCGAGCT 3332 33 100.0 34 ................................. CGGGACGGTCTCCGCCAGCGCGGTACCCAGCTTA 3399 33 100.0 34 ................................. GCTATTGTACTTCTTGGGATTTTGGTTTCTTTGG 3466 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 52 33 100.0 35 GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Left flank : ATGTTGAATTGAGGGGCGAAGGG # Right flank : TTGGTATGCAGCATGTAAGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.50,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [18.3-18.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.74,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 56-3005 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFHK010000055.1 Intestinimonas butyriciproducens strain GGCC_0179 NODE_55_length_3025_cov_366.096296, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 56 33 100.0 35 ................................. GTGGACGAGTGCGGTACGGTTGATCATGGAGCCGC 124 33 100.0 33 ................................. TTCCGGAGCTTGGAGTAGTCGGCCATCTTAAGA 190 33 100.0 34 ................................. TGCAGCCCGCCTTTGACCGTATCCACCGCGCCGG 257 33 100.0 35 ................................. GACATACAGCACGCCGGGCTGCGCCTCTGCAAAAT 325 33 100.0 35 ................................. TCCACGCTGGGGTTGTACAGGCCGATCTTGTCGTC 393 33 100.0 34 ................................. CCGTAAACTTACCAGCGAGGCCGTAGAGGCCCTG 460 33 100.0 35 ................................. AACGGCGATGCACACGATGTTCGTGGAAATGGGTA 528 33 100.0 35 ................................. AACCCCCTGGACGGGCAGGGCTGTAAAAACGAGAA 596 33 100.0 36 ................................. GCTTCTCCCACAACGATGAATACCCCACCGTGAAGG 665 33 100.0 35 ................................. ACCGCCTCCGCGACCTTTCCGCCAGTGGCCTTGTC 733 33 100.0 35 ................................. TATCCTTGTTCTGGTGTCCAAGCTGCCGGTTAGTG 801 33 100.0 35 ................................. AGACATTTTTGAAACCTCCGTTTATTAGTCACCCC 869 33 100.0 35 ................................. TTGTTAATCGTCCTCATACCACCACTTGTCGATCT 937 33 100.0 34 ................................. CGCTTTTGAGGTCTGCCGCCGCCGCAGTCGCGTC 1004 33 100.0 34 ................................. TTGTTCCAGGCATCGCGGGCCGCAGAAGGAGGGA 1071 33 100.0 37 ................................. ACTTTGTGGCTTATATCCATCCAATGACATAATAGAG 1141 33 100.0 33 ................................. GTCCGTTTCCGTTCTCTCCGCCTGGCCTCCCAC 1207 33 100.0 37 ................................. AGGCGGCAATCCAGGAGGCGATGGCGGACCGGGAGGA 1277 33 100.0 33 ................................. AAAGCGAATGGAACAAGGTACAAGGTCAGGTTG 1343 33 100.0 34 ................................. GCCACTGTGACCTCCATGGGTGTGGGACCATATT 1410 33 100.0 33 ................................. AGCTTTGCGTTCCGGGCGGTGACTGCGTTTACA 1476 33 100.0 35 ................................. ACCGACCACCCGGCATAGTCAAGCCCGGTCTTCGG 1544 33 100.0 36 ................................. GGAATACTCTCTCCAGGGCATATCTAGTAGCGTCAA 1613 33 100.0 35 ................................. AGCGGGCCAGCGCGGTTTTGACTCTCAAGGCTGCC 1681 33 100.0 36 ................................. GCTCTTGACGAGCGCCCATTTATCAATCAGCGTCCC 1750 33 100.0 38 ................................. TCCGTCGGTGTATGTGCGCTCCATCACACCATCCACAA 1821 33 100.0 35 ................................. TGCCCTATATGACCGACGGTCGAGGCAATACCCTG 1889 33 100.0 33 ................................. CCGGGAGCGGATGGAGAAGCTAAAATCCAAAAT 1955 33 100.0 33 ................................. ATCTTTGGTAAGGTGGTAAATCTCTGAGATACT 2021 33 100.0 34 ................................. AGGTTCGCGTCCGTATAATCGTGGGCCTCGGCAA 2088 33 100.0 36 ................................. ATATTTTTGTGTTACGTGTTCCAGCTCTCCCCTGAG 2157 33 100.0 39 ................................. TCTTTCGCACCAGTAATATAACGGGACTCCACCACCAGA 2229 33 100.0 34 ................................. TATTATTTGGGCATCCGGTCATTTTCCTGTGCGA 2296 33 100.0 36 ................................. ACAAACTCGTTGTATGCATTTGGCGTTCTTCTGCGG 2365 33 100.0 35 ................................. AAGGAAATCATTGGGCACCTCCGATGATCTCGTCC 2433 33 100.0 35 ................................. AGCGGGGTCGCATACGGGCTGCCCGGTGATGACGG 2501 33 100.0 34 ................................. ACTCCTGACGGGGCGGTGTAACACATGAAGGAAC 2568 33 100.0 34 ................................. CCGCCATTTCCAGCGCCTCCACAAACTGCGCATA 2635 33 100.0 35 ................................. AATTTGGCCTCCTATATTCCAAATTTAGAAACCAG 2703 33 100.0 35 ................................. GGTGAAATGGACATCTCGGACGTGGAGGAGCTGCT 2771 33 100.0 33 ................................. AGCCGCGAATATGTCCGAGATTGCCCGGGCGAC 2837 33 100.0 35 ................................. ATGACGGAGCCGATGGCGTTTCCGATGCCGGAGAA 2905 33 100.0 35 ................................. CAGTGTGCTCTTCTGCGCGTCGCTTGGCGGGCCCA 2973 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ======================================= ================== 44 33 100.0 35 GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Left flank : CGGGGGGCGTGGATTGAAATTTGGTATGCAGCATGTAAGCTGGGAATTGGTAAAGG # Right flank : ATAGACCCGCGCAGCAACGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.50,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.01,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 23-2418 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFHK010000018.1 Intestinimonas butyriciproducens strain GGCC_0179 NODE_18_length_81023_cov_401.740033, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 23 33 100.0 35 ................................. ATAGACCCGCGCAGCAACGCCTTTGTGTCAAAGGC 91 33 100.0 35 ................................. TGGGGAAGCTGGATGTGTTTGTGCTGGAGAGCACC 159 33 100.0 34 ................................. CGCACCACCAGGGTGATGTGGTCCAGGTCCAGGG 226 33 100.0 34 ................................. AAGGTGAACCGGGATATGATTACCTGCCTCATCA 293 33 100.0 34 ................................. GCAGGCGGCAAGAGATGGGTCCGTCATCCCGCCC 360 33 100.0 33 ................................. ATATCAACCGGATATTTCAAAACGAAATGGTAG 426 33 100.0 34 ................................. CCCTCTTGACAAGTTGGCGATACGCCATTATACT 493 33 100.0 35 ................................. CTCAAATCGCAAAAGCACCTCACCGACGCTGGTAT 561 33 100.0 34 ................................. ATCGATACGGAGGGGAGCACCAAGCACATGGATG 628 33 100.0 33 ................................. ATGCAGGCTATCAACCTTGAAGCCAACTTCGAG 694 33 100.0 35 ................................. ACCAGCAGGCGTACCGCCACACTCCGCGCCCGCAC 762 33 100.0 38 ................................. GAATACTAATGTTACAGATACTGGATGGGCATATAGGG 833 33 100.0 35 ................................. GTCCAGCTCCCCCTCCACGTGTACGATAGGCTTGG 901 33 100.0 37 ................................. GTCAAATGCCACGAAGTCATAGGCTTGGCCCTGGTAC 971 33 100.0 34 ................................. GCTTCGAGGCGACCGATGACACCCGTGAGGAGCA 1038 33 100.0 36 ................................. ACAACAATGCTTAACTGTGGTACAATTAAGCTGGAG 1107 33 100.0 34 ................................. CCCTTTGACCGCACCAAGGCGGAACAGATCATCG 1174 33 100.0 34 ................................. GACTTCTCCGTGTTGGAGCAGATGCCGCTGTCCA 1241 33 100.0 35 ................................. AATCCCCTGGATGGACAGGGCTGCAAGAACGAGAA 1309 33 100.0 34 ................................. GTAAGCAGAGTAATCGGGTCCGTCGAGGAGAGAA 1376 33 100.0 35 ................................. AACCGCATAGAAGAAGAATTTACGAAACAGTAGGT 1444 33 100.0 35 ................................. CCACACTGTGCGTCTCTGGAAAGAGGTGGAGTGCG 1512 33 100.0 36 ................................. GCCGGAATATCAATACCCGCCATCATATCCCAAGAT 1581 33 100.0 33 ................................. TGTTGAGACATCTGGGCTGCGCATTACAGGGAG 1647 33 100.0 35 ................................. ACTGCTGGTTCGATCCGGAGGCGGAGACCGGACAG 1715 33 100.0 35 ................................. ATGGGCGCCACCGACGCGGCACTGGGCAACGTCAA 1783 33 100.0 33 ................................. AAGGAGCGCTTGCGGCGCATGGGGCGCGACAGA 1849 33 100.0 35 ................................. GAGCCCGGTCGAGGGCACAGAAAACCACGCCGACA 1917 33 100.0 33 ................................. CCCACCACCGCCGCCTGCTTGGTATATCTCATT 1983 33 100.0 35 ................................. CGGATATTGGCCAAAAACATATCCTTGGCGTTCTG 2051 33 97.0 33 .....................A........... GCAAAATTACCCATTGGGCCAGACATAGAGGGC 2117 33 100.0 35 ................................. GCTACGCCCTGGTGGAGTCGGACTCTATGCCGGTC 2185 33 100.0 35 ................................. GCGCGATGGGTCAATATGCGGGCCGCGTTTAAGTC 2253 33 100.0 33 ................................. GGCGATGTCCATGATCTCGTTGATGTACTCGTA 2319 33 100.0 34 ................................. GCGGCCTCCAGCGGGTCCGGTGCCGGGTGGCTGG 2386 32 78.8 0 ..............-.........A..CTCC.C | C [2390] ========== ====== ====== ====== ================================= ====================================== ================== 36 33 99.3 35 GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Left flank : GATATGATTACCTGCCTCATCAG # Right flank : CTTTATACGGTCGCTCACATATGGATAAGACCGCTAAAAAATCCAATGAATCTTTCGTAACAGCATCCTATCCTACTTCTAACAAATTTCTAACAGAACGATAAAAATGAATATCCAACAGGCCCAATGGTTTCTGAGATTTTATTCCGCATGAAACCCGGAACTCCTTGTGCCACAGCGGTTTTATGGGGTATTACCAGAGACAGCCAAACACCCGTAGGAACATACCATGCCCCCTTCGAGTTCTGCTGTCTCCACCAGAAAAATCCATGGAGCCGCAAGGCTTTGGGGATTTTTCGTTTTTGGTTAATTTTTAAATGTGACATTTCTTTGTATCAAATGTGTTTCTTTTATGAATTTTAGCACTCCTATATTGACAGTGCTAAAACAGAGGACTATAGTAGAGCCGTACCAAGGGAAGGGGACCAGAAAAGGTCTTCTCTGCAGGGCAAAAAGGTAAGACAACGAATGGAGGAATGACTTATGTTGCCCAGCATTTT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.50,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //