Array 1 186073-183423 **** Predicted by CRISPRDetect 2.4 *** >NZ_QPAH01000023.1 Klebsiella pneumoniae strain JHTS008 tig00000044, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 186072 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 186011 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 185950 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 185889 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 185827 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 185766 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 185705 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 185644 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 185583 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 185522 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 185461 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 185400 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 185339 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 185278 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 185217 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 185156 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 185095 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 185034 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 184973 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 184912 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 184851 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 184790 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 184729 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 184668 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 184607 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 184546 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 184485 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 184424 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 184363 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 184302 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 184241 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 184180 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 184119 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 184058 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 183997 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 183936 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 183875 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 183814 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 183753 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 183692 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 183631 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 183570 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 183509 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 183451 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //