Array 1 1815720-1820369 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP038022.1 Acinetobacter radioresistens strain DD78 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1815720 29 89.7 31 ....G.......C...............T GAGTCAGTTCCACCACTAATCACAAGATAGG 1815780 29 93.1 31 ....G.......C................ GATCATCACGCGCCTTTTCCTTGTTCGCCTT 1815840 29 93.1 31 ....G.......C................ TAAGGCATTACATTTGGAGTGCGTACCTGTT 1815900 29 89.7 31 ....G.......C...............C GCCAGTATGCGACACAACATTTCGTAGAATA 1815960 29 89.7 31 ....G.......C...............T ACCTAAAACCATTTTAGACCCATCCGTATCA 1816020 29 89.7 31 ....G.......C...............C CAAGTCAATTCTCTTAATCCCATATCATCAT 1816080 29 93.1 31 ....G.......C................ TCACGCCACCTCGCTTTCACGTTTTTCACGA 1816140 29 89.7 31 ....G.......C...............T TTAGGCACATCATCCTTGCCGATCAGACCTT 1816200 29 89.7 31 ....G.......C...............T GAATGGGTTGTGAAGGGTGCGCAGGACATTA 1816260 29 93.1 31 ....G.......C................ AATAGCTGTTTGGCCTTGTCGGATGGTCTAA 1816320 29 93.1 31 ....G.......T................ TGCCCTGCCGCTACTGCACACGCTGTAATTG 1816380 29 93.1 31 ....G.......................T CAGCACGTTGCCAGTTATCATTCGGATCACC 1816440 29 96.6 31 ............................T CATGAATTTACTTTCATTTGTAGAGAGTAAG 1816500 29 100.0 31 ............................. TTGAGTAAGAGTTATAGGAAATGAAATTACA 1816560 29 96.6 31 ............................G AACATATATTTGGCTTTTATGAATCTATTCA 1816620 29 96.6 31 ............................C TCTGGCATTTGAGTACATGTAGTCGTAGGGA 1816680 29 96.6 31 ............................G CCAACACCCGATAACAAACCTGCACCGATTG 1816740 29 96.6 31 ............................G CTACAAACTCGAACACAGATTGAGTCGTAAG 1816800 29 96.6 31 ............................C CTGTTATGGTCTGGCCGTCATCTGTCTTACT 1816860 29 100.0 31 ............................. ACAATTATTGTGCAGCTAGTATGTCAGGTTC 1816920 29 100.0 31 ............................. GCCGCATAAGGGAGACCAGAACCTGTTCTGG 1816980 29 100.0 31 ............................. GCCTTCCTGAGCAAATCCACTAGATCCTTTA 1817040 29 100.0 31 ............................. TTACAGAATCAAGGTTCTAAAATGGCTACCT 1817100 29 100.0 31 ............................. GTATCTGCTTTTCTTTTTGATCAAGATGTTC 1817160 29 96.6 31 ............................G TGAGTCTCATTTTCGGTCATAAGACCCCCCT 1817220 29 96.6 31 ............................T ACTGATGGGTCGCTATAGATGCTCAGCAGAA 1817280 29 100.0 31 ............................. TAGTTAGGACTGCGATTAGAGGGATCAAACA 1817340 29 100.0 31 ............................. TTGGTGACACCAATAGCATCCGTCACAGATG 1817400 29 100.0 31 ............................. TTTGGAAAATCACGCCAGTCAACTGGCTTGT 1817460 29 100.0 31 ............................. TCAAGTTACATATCAGCCGACTTCTCAGCCT 1817520 29 96.6 31 ............................T GCCTAATGCTCAGGCCGTGTCTCAAACCAAA 1817580 29 96.6 31 ............................T ATATCAATTCCTGCATTCTTCATCGACTCTG 1817640 29 96.6 31 ............................C CGACTTGGTTTTCACACCAAATCGAGGGCCT 1817700 29 96.6 31 ............................G TAACGGGACGCCGAGATAAAGTCATCCTTAC 1817760 29 96.6 31 ............................C AACAGCACCGTATTCTCTTTCCGGCAACATT 1817820 29 96.6 31 ............................G AACGCTTCTGCAGAACCTGAGGAAAAATATT 1817880 29 96.6 31 ............................C AAAGGCAAATACTCGCCACAATCATCAGCAT 1817940 29 96.6 31 ............................G TGAATTCATTATCGACCAGAGCTACCACAAT 1818000 29 100.0 31 ............................. ATAATGAGTGCAGCACTAAATGCAGAAATAG 1818060 29 96.6 31 ............................G TTAGATACTTGTTCTAACGTTGCCTCTGCAA 1818120 29 100.0 31 ............................. GCAGCTTTGCGGATACCTGTTACAGTCATAA 1818180 29 100.0 31 ............................. GTTTCTATAATGCTTTTAGCTCTTTATTTTT 1818240 29 96.6 31 ............................T CTGATTACGCTTTTACTGGAGACATTGATGG 1818300 29 96.6 31 ............................T CATCTCTTAGCCGCTGTGTCTGTGCCATTTG 1818360 29 96.6 31 ............................T CTACAGCCGTACCGCCTACAGTGCTAAAGCT 1818420 29 96.6 31 ............................T GGGTAATTGATGCCAATAATGTTCGTCACAA 1818480 29 100.0 31 ............................. GTTCTTTTAAAAACATCACGAACCCTAGTTG 1818540 29 100.0 31 ............................. TTTAGATAATTTAGAAGCAAAGGTACAGCAA 1818600 29 100.0 31 ............................. AAACAAAACCTTATCGCCCTTGTGTGGGACG 1818660 29 96.6 31 ............................C TATTGTTTTAGTCGTTCTCGCGGTGCTTGCA 1818720 29 96.6 31 ............................T GTCAGAGTAATTGTTCCAGTAGCAGCTACGC 1818780 29 100.0 31 ............................. ATTTCTCTGCCTTTGTGAAACGGTAGTGTTG 1818840 29 93.1 31 ....G.......T................ ACCACGCATACCACACTGCTGAATTGGGCCA 1818900 29 89.7 31 .C..G.......T................ GGATCGGACGCGCCACCTCGAAGGCTTTCGC 1818960 29 93.1 31 ....G.......T................ GTTATAGAATCTTTAATAGTTACATTGGCAA 1819020 29 89.7 31 ....G.......T...............T ACCCACTTGTCATTCAGCTTATCTATACTGA 1819080 29 89.7 31 ....G.......C...............G AGGCGTACCAGATGCCATTCTCGAAGCTGAA 1819140 29 93.1 31 ....G.......C................ CGCAAGAAGTCGCAATTAATGTACATTTGAT 1819200 29 89.7 31 ....G.......C...............G GAATCATGATGACTGCATTGATTCTGAATGA 1819260 29 89.7 32 ....G.......C...............T TTCCGTGCAGCCATAATGATCAGCCAGAATAC 1819321 29 86.2 31 ...TG.......T...............C GCCAGATCTGGCGGCACGGCTTTAGCCTTCA 1819381 29 89.7 31 ....G.......T...............T GAAACTATCCCAGCCAGCTTAGTGGCAATGT 1819441 29 89.7 31 ....G.......C...............T TAGCCTGCTGGTACTTTGCTATGAATTCTGC 1819501 29 89.7 31 ....G.......C...............T TGCAAAACTAGATAAGAGCCAAGGCCAAGCC 1819561 29 89.7 31 ....G.......C...............T GGCGTTGAATTGCCCCTGGACGACTGGAGAA 1819621 29 93.1 31 ....G.......C................ TCTTCACCACCAATCTTTTATTAAAATAAAT 1819681 29 89.7 31 ....G.......C...............T TTTGTACCCTCATCGCCCCACGATCTATCGT 1819741 29 89.7 31 ....G.......C...............T AACTACAAAAATGTTGAACCAATCACTTCTT 1819801 29 89.7 31 ....G.......C...............T TGTTGCGTATATGCGACGTACTTATTACCCT 1819861 29 89.7 31 ....G.......C...............T TTAAATTAGTTTCATATATTTTGGGATTAAG 1819921 29 89.7 31 ....G.......C...............G TTTGAAAGTGTTCCTACTCATTACACTGGCA 1819981 29 89.7 31 ....G.......C...............T TTTGATAATGTTCTTGCCAATGGTCATTCGG 1820041 29 89.7 31 ....G.......C...............T TTCGACATTCTTGTGATAGATCTGAGAGAGA 1820101 29 89.7 31 ....G.......C...............G CTAATAATGCATCAGTATCAAAAAATGGTGT 1820161 29 89.7 31 ....G.......C...............T TCAAACTCTGCTTAACTGAATCGGGCAAGCC 1820221 29 89.7 31 ...TG.......C................ ATGAGATCAGTTGAAGATATGGCGCAGGAAT 1820281 29 89.7 31 ....G.......T...............T CACCGTTTTTAGTGTCAGTAACGGTAATAGT 1820341 29 86.2 0 ....G.......C...........A...T | ========== ====== ====== ====== ============================= ================================ ================== 78 29 94.3 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCCAAAACATTATACAAGCAACTTGCTAAAGGCTTTGGTGTTGAGTTCATTCGCGATGAAGGAAAAAATTCTCATGATACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTACGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCTCTCCCTATTTTGCACGGTAAAACACGTCGTGGGGGTCTAGTCTTTGATCTAGCTGATCTAGTGAAAGATGCTTTTGTGATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACAAAGATATTTTAGATTACATGTTTGGCTTCATTACTGACATATGTAGTAAAATTAAATAAAATCATATAATTAAGTTTTATACTTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTCAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TATCCCTTATCTTTCGGCTTGTCATCTATGAAGTTTGTTATTCCATAAATGGTTTAAGACTTTTAAAGAGGCATAGTAAAAACTTCTATAAACAATAAAATTATTAAAAACAGAATTATTGTTCAATAAATCATCCAATTTCATCTACATTATTAAATTAAAAAGGTATTATGAGCCGAAATATATCAGAATTTGATTAATTTATGATGTTCATGAGAAAACTGGGTAAGTCTCTTGACCTGGACTTGAGAAAATTAATACTTTTATTAATCGTATTCTGCGTATCTACACTCTTCTTTGTATCTTTAGGCGTGAGTTATTTAATCGTAAAAAACCAGTTAATCAGCAACTCTTTAGCGATTAACTCGGAATATGCAAATAAAATTGCCCTTAATACAGACAATCATTTTCAAAATATATTAAAAGAACTCAAGTACAGTGCTCAATCTTTGGGGAAAGATTTTAACAATTTTGCGTTAAGAGAAGCAGAAGTTGACCGT # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : GTTCGTCATCGCCTAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //