Array 1 1381767-1387646 **** Predicted by CRISPRDetect 2.4 *** >NC_017464.1 Ignavibacterium album JCM 16511, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 1381767 30 100.0 37 .............................. AATGTTGAAATCACCTTTAGTAAGAGAAACCTTCTCT 1381834 30 100.0 39 .............................. AGAAAATCGAGCTTCGTTATTAGCATCAATTATTAGGTA 1381903 30 100.0 38 .............................. TTTGGAGGGATATAAAATACAGGTACTTTCCTAATGGA 1381971 30 100.0 39 .............................. CAGTATAGATTTAAAGAAATAATTATCGTTCTTGAAGAA 1382040 30 100.0 37 .............................. TGCTGAAGCTAAAGCAAAAGCAGAAATAAGTAATAAA 1382107 30 100.0 36 .............................. CAAGGGAAAGGGATAAGGTTTTTTCAACAAGTTCCA 1382173 30 100.0 36 .............................. TGAAGATTTATTTTGATTTTATGTCGCTCTGATTTT 1382239 30 100.0 39 .............................. GCAAAATTGACAGTCCTACTATGCCAATAAATGCCATAG 1382308 30 100.0 38 .............................. CTGATAATTTGTAATAAATATTTTTGTTTTTTTCATTA 1382376 30 100.0 37 .............................. ATCGACCTAATCGTTTTCTTTGATATTAAGCTTGACT 1382443 30 100.0 37 .............................. AGCACTTTGCTTTTTCTCATATCGATTAATTTAGTCA 1382510 30 100.0 37 .............................. ACAGTAGTTTTCTCAACTGTTCCATCCTCTTTCATGT 1382577 30 100.0 37 .............................. AAAAAATCAGATTTTTTGAGAAAAAGCACTTTGCTTT 1382644 30 100.0 37 .............................. TTCCTGAAAATTATTTCCAAAATTTCTGATTAGGTCG 1382711 30 100.0 37 .............................. CCTGGCAAATGCATCATAATTGCACCGACGCCCTCAG 1382778 30 100.0 35 .............................. CCTGGTCAGTTGTAGTCTGATGCGGAATTTTTCCA 1382843 30 100.0 36 .............................. CTTGGAGAAGCATTTTGAGTTGCTTCGTTTAGCATT 1382909 30 100.0 37 .............................. AAGCTTCGGATCGAACACTGCAATTGCGCCAACAGTA 1382976 30 100.0 37 .............................. TGCTTCAGGATTAGCCGATGTCATATCACCGGAGAAC 1383043 30 100.0 36 .............................. TTTGGATAAAATCAATATCCAAATTTTTTTGACTAT 1383109 30 100.0 35 .............................. CCATATCAAAAGGATATTTATATTAAAAATGCTTA 1383174 30 100.0 39 .............................. GAGAAACTCTTCAAGGGATAAATCGGTTTTTTCAACAAG 1383243 30 100.0 39 .............................. CAGGTCTCCGACTCTTTCACAAATTGCCCCAAGTTGGGG 1383312 30 100.0 34 .............................. ATCAAAATAATTCGTCTAGTTTGTGTTCTGTTTG 1383376 30 100.0 37 .............................. TTTCTTTCGGTAGTAGGAACATAAAAGTTCCATTTAT 1383443 30 100.0 37 .............................. TACTACTTTATAAATTTATAATTTATTATTGTCTAAA 1383510 30 100.0 37 .............................. AAATATCCTAATTATCAAACAATAATTATTCGGATAA 1383577 30 100.0 38 .............................. ACTCTCTCAACTTGCTCACGAAGGATGTTAATTTCCTT 1383645 30 100.0 37 .............................. TACTACTTTATAAATTTATAATTTATTATTGTCTAAA 1383712 30 100.0 37 .............................. AAATATCCTAATTATCAAACAATAATTATTCGGATAA 1383779 30 100.0 38 .............................. CCTTTCAAGGACTGGTCTTTCTCCACCGCCCGCCTTCC 1383847 30 100.0 37 .............................. GCAAATCCAATTAATACAGCTTTCAATTGGATCAACC 1383914 30 100.0 38 .............................. TATTTTTTCGATCTGTTCACGAAGGAGGTTTATCTCCG 1383982 30 100.0 39 .............................. CTTGCAACCAATCCGATTATATCAGATGGAGCTTCTGAG 1384051 30 100.0 34 .............................. TCAGCTTGATGCACAGGAAGTTTATGTTCAGCCA 1384115 30 100.0 37 .............................. GGACTTGGAACTTTTATATCCCTTGCGAGAGTGTTTT 1384182 30 100.0 39 .............................. CCAAAAACCTCAGCTTGAGATTATTATAATAATAAAATA 1384251 30 100.0 36 .............................. GTATTGATTCGGAGGTCTAATTCCTCCCAATCTTCT 1384317 30 100.0 35 .............................. CCAAATATATCTTTATGTTATTAGGATATTTATTG 1384382 30 100.0 38 .............................. AAACTTTTATTTTTGGAATAAAACCATCAAGATTTTTA 1384450 30 100.0 37 .............................. CCGATGATTAAAGCCAAGCCATTTGGCTGCTTTTTTA 1384517 30 100.0 35 .............................. CATATCTTCTCCTTATTAAATTATTAATTAGTTAA 1384582 30 100.0 36 .............................. GCAGCTTCAGGCTCATACTTAATCGCAATTGAATTG 1384648 30 100.0 37 .............................. AGAAACGAATCAGCTTTTCCGGGATTTGCGGTAATGT 1384715 30 100.0 39 .............................. AAAGCTTTACCAGTTCCTCGGCATGGCCGATATTTATCG 1384784 30 100.0 36 .............................. TAAATTGCCCATCTTTAAGGTAAGACTCATACAACA 1384850 30 100.0 36 .............................. TTACTTGGCCAGCGTAGAATTCGTCAAGGCGTTTTT 1384916 30 100.0 39 .............................. TTTGTTTATCACCCCAATTAGTTGAGGGGTGATTTGATA 1384985 30 100.0 36 .............................. GCATTCTTTAACTTCCACTCGTTACGAATGATTTTG 1385051 30 100.0 36 .............................. CCTCCTTTCAAGGACTGGTTTTTCTCCACCGCCCGC 1385117 30 100.0 37 .............................. GGCGATATTATCAAGGTAACATATATCGGTTCAAACA 1385184 30 100.0 38 .............................. CGGGATCTGCCGGTATTTGCCCAAGTTTTGAAGTTTCC 1385252 30 100.0 39 .............................. CATTTGAGCTATCTTAATAATGGTCGGGCGATTAGATAC 1385321 30 100.0 37 .............................. TGTTTTTTCTCCAAGTATCTTTTCTCAAAGGCCTTAG 1385388 30 100.0 36 .............................. TTTTTAGTTGTTTTCATGTTTTTCTCCTTTTTATGT 1385454 30 100.0 38 .............................. TTTCGTAATTCTAAGACCCAACAAGGGATTCACCCTTG 1385522 30 100.0 38 .............................. TTGTTCATATAGGTTTTCCTTTGTCTTTTGCGCTTAAA 1385590 30 100.0 39 .............................. TGTCATTTTCTTTGATGACGTATTGTATTGGTTCATCAA 1385659 30 100.0 37 .............................. AACTGTGGCATAATGAATGCCTGTTTTATATGATTCT 1385726 30 100.0 37 .............................. AACCGGCCCAACCACTGGTACCTAATGTCCTTATGGA 1385793 30 100.0 37 .............................. AAGACTTGCTCAGGTCTTATATTTATTCCTCTAGTTC 1385860 30 100.0 38 .............................. CTGACCAGCCCTTTTGAAATAAATTCATTGATGAATAG 1385928 30 100.0 39 .............................. TATCTCATGTTCTTGCAGGTCTCTCACTTCGTTGTCCTG 1385997 30 100.0 37 .............................. CGCTTTTCTCTCCATTTCCTCAGTAAAAGCAAGCATC 1386064 30 100.0 41 .............................. TTGCCAAATACACCGTCATCTTTCAGTAATCTGACTTTAAG 1386135 30 100.0 40 .............................. TGTCATTACAAATGCTTTAATAATATAGATACCAAGTGTA 1386205 30 100.0 38 .............................. AAATGTTTAATAATGATACACTATCCATAGGTTCATTA 1386273 30 100.0 38 .............................. GATTAAGTGGACCGCACGGATTAGGTGCGTGTTAATCC 1386341 30 100.0 37 .............................. TACCTTTACTGCTGTTCTTTCCGGAGAATCAATAATA 1386408 30 100.0 36 .............................. CAAAGCTTGTTCTTGTTCTGAATATCTCCCTGATTA 1386474 30 100.0 40 .............................. GAAAGCTTGCCACAATATAGATGTTATATGTATCAAGCGG 1386544 30 100.0 38 .............................. TGGTGAAACACATTATTATAATCACCCTCACGGACGTA 1386612 30 100.0 37 .............................. TTTGCTGAGGCTATCCTTCAGAATAGCCTCAAACAAA 1386679 30 100.0 37 .............................. CCGTTGGAGCTGGCAGCATTTCTATGAAGGTGCAAAG 1386746 30 100.0 37 .............................. TTTGCTGAGGCTATCCTTCAGAATAGCCTCAAACAAA 1386813 30 100.0 37 .............................. TGCGCAATAAAACATATCTAACATCCTTTTATCTTCA 1386880 30 100.0 38 .............................. AATTACTATTTTGTATTTGTTCGGCTTCCCGTATAGCC 1386948 30 100.0 38 .............................. ATATTTCGGGAATTGCTTGTTGTAATTGAAATAATTTT 1387016 30 100.0 36 .............................. GCAATATGGCCCGCTTCCATTGATTTATGGAGACAT 1387082 30 100.0 35 .............................. TCATTGCACCTCTATTTTATTTTTATGTTAGACCC 1387147 30 100.0 37 .............................. CGTTTGAACATTGGCACCAGGTCTTACAGATACTGGA 1387214 30 100.0 36 .............................. CCGGTAATGGTATTCTTATTTTCTGCCGGGATCTGC 1387280 30 100.0 36 .............................. TAAAATTCCATTTGCACTTGAGTCCCACTCTATTAA 1387346 30 100.0 38 .............................. TATAAATCAAAATTCAGAACACAGGATGAAGATATTGT 1387414 30 100.0 38 .............................. TTCCATAGAATTGTCTCTATGTTTATTGAGTGTATTTC 1387482 30 100.0 36 .............................. CTCAGCATTTGGAGACTATGGTGGGACTGGCAGTGG 1387548 30 100.0 39 .............................. ACAATTCCCTTTGCAAAAACTTTTATTTTTGGAATAAAA 1387617 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 88 30 100.0 37 GTTTTAATCGAACCATAGTGGAATTGAGAC # Left flank : AAAGTTCATAAATCTATTTTCAACACACTCCAAAAAATTAGATCTGTAGGGACAGGGCTTGCCCTGTCCGCAAAAGAAACAAATTTACGATATTTTGCTTTTGAGAGAGCCCCGAATTCAATCTTATCATCCTTAACCTCAAACATCTAAGCATCATCAAATCATTATTCGTGACCTAACTATTCAGACAGATTATTTCGGGTAAATTCCGGCCTGTAAACCCTGTAAAAAGACTTTACAACCTGCAGATCCCCCCCCAAAATTCAATTTTTGAAGTTGCGAATTTGAGCCGAAAACAAAGCCGAATCCTCAAACCTCCGTCCAAAAAAATATACAATTACTCCCGAAAACCCTAAAAATTGCGATTTTGCTTCAAAATCTAAACTTGAACCTCCCGAGGTTTTTAAAGAAAAAAAGGTTCCAAAAATTTTTTTTAAAATAATTTTAAGAAACATTTGATTTTTTCAAATAAACAAATATTTTTGCCCAAGAAATGGTGG # Right flank : CTAAAATCAAAATAATAACAAAACAGAAAAATGAAAAACAAACTAAAAAACATCATAAAATACATCGGAATAGGAATAACTAGCGGATTAACAATAATCACACCAACAAAAGCACAATCAACAGAATACAACAAACCAACAACAGAAATAATACAAGAAGGAGACAACATAATAATACCAGAACACAAACTAACAGAATTCATAAAAAACAACAAACAAGAAAAAAACAACAAAATAACAAAAAAAACACTAGAAGAATTCATAAAAGACGGATACATAACAAACGTACTAACAAAAGAACCAATACAAGGAATAGAAACAAAACTAGTAACATACACACCATTCCCAACAGACACCATAGGACCAGTAACAACAAACTCTCAAGGATACTACACATTCACAATAACAGGAATAAACGAACAAAAAGAAACAAAAAACATCGGAACAATAGAATACATAAACGGAACAGCAAAAATAACAGTCAACAACTACAAAAAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGAACCATAGTGGAATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-85.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 3459265-3460552 **** Predicted by CRISPRDetect 2.4 *** >NC_017464.1 Ignavibacterium album JCM 16511, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================ ================== 3459265 30 100.0 45 .............................. AAAGCAAATCACAACGCACCACCTTATTTAATGGCACTGTAACAT 3459340 30 100.0 45 .............................. AAAGCAAATCACAACACGATGACGGGACAATAAGCGGCCACATTG 3459415 30 100.0 45 .............................. AAAGCAAATCACAACTAATGGTTCAACAACATTTTACAATAACCC 3459490 30 93.3 50 ........................G.C... TCGGGAAAAGCAAATCACAACAAATCGCTTTGTGCGATTCATCTCTGTTA TCC [3459513] 3459573 30 100.0 45 .............................. AAAGCAAATCACAACTAATGGTTCAACAACATTTTACAATAACCC 3459648 30 93.3 51 ........................G.C... TCGGGAAAAGCAAATCACAACATATCACTTAGTATTAACCACTCAAGTTTT TCC [3459671] 3459732 30 100.0 45 .............................. AAAGCAAATCACAACCAATCTGGGGGGTGAGACAGGTTTTTCATT 3459807 30 93.3 51 ........................G.C... TCGGGAAAAGCAAATCACAACAGTGTTCTCATGTAAGCTCTCGTGAATCTG TCC [3459830] 3459891 30 100.0 45 .............................. AAAGCAAATCACAACAGAACTAATATAATTCCCCCATCATTGCTA 3459966 30 100.0 45 .............................. AAAGCAAATCACAACTTACAAAATCAGCATAATAATAACAAATCA 3460041 30 100.0 45 .............................. AAAGCAAATCACAACCCCATAGCCTCTCGGGTGTTCTGCCAAAGT 3460116 30 100.0 45 .............................. AAAGCAAATCACAACTATATGCAATTATGCTTCTTATTGTGCTTG 3460191 30 100.0 45 .............................. AAAGCAAATCACAACCAGGGGTTATTGTAGGATTATTAACACTTG 3460266 30 100.0 45 .............................. AAAGCAAATCACAACTAATGGTTCAACAACATTTTACAATAACCC 3460341 30 93.3 52 ........................G.C... TCGGGAAAAGCAAATCACAACAAAAAGATATTGACTATCTTAAACAGATAGG TCC [3460364] 3460426 30 90.0 64 T.G.T......................... TCCAAAGGATGCTGTGCAAAAGCAAATCACAACAAATGGGACAGAAATATCGTCTTATGATAAG 3460520 30 83.3 0 T.G.T...................G.C... | TCC [3460543] ========== ====== ====== ====== ============================== ================================================================ ================== 17 30 96.9 48 GTTGGTTTAATATCCTCAAAGAACAAGTTG # Left flank : GTTTTTCCGGCAATCAAAGAAAAATTATTTATCCGGTATTTAGATTATGAGATTAAATCAATACAGAATAATGTGGATACTTGTATTATTTGACCTTCCGACAGATACACCGAAGGATAGAAAGGCTTATGCAAAATTCAGGAAGGAACTGATAAAGGATGGATTCAATATGTTTCAGTTTTCAATTTATGCAAGGCATTGTGCAAGTAAAGAGAATATGCAGGCACATGTTAAAAGAGTAAGAGAAATTCTTCCTTCTAAAGGTCATGTCGGAATATTAAAAATAACCGACAAACAATTTGGAATGATGGAAATTTTTTACGGAAAGAAAAAAGAAGACAGCGGTTTTATAGAATCTCACCAGTTAGAGTTGTTTTAAAGAAGGGCTGAATTTTCAGATAGAATTCAGCCCTTTAAATGATATTAAAACCCACAGCTTAATTTTTTCAATCCTAAAATTTCCGTAAGTAATTGTTTTATAAAGAGGTAAAACCAAATGA # Right flank : GTCGGGAAAAGCAAATCACAACTATATCATTATCATTTTAAAACCTGCATACAAATAGTCGCACGCTTCACGTCTACCTGTCGGTAGACAGGCGTGCGTGGATTGAAGGATTTTTGATTATTCACTTTAGTGGCAGACTAATTTCTTTAAATGATTTATTTTTTAATCAAGGTTAAGAATTAACTTTTTAACTACTTTTCTCTCCTAATTTTTTCTAATCTTTGCTATGCTTTTGTCATCGAGTTACTCTTTAAAAGTTTTATTTTAAGATAAAACTTATGAATAAATACATCTATTTTATCTTATCTTTCAAAAATACCATTCTTAAGATTATGCTTTCTCACTTAAGTAAAATCATACTTTTAACATCACTAAATTTAGATGCTTGCAATCTATAAAAATAGATAGCGCTAGATAATTCCGAGCCGTCAAATGTTACCTTATAATTTCCCGCATTCTGATGCTCATTCACCAAAACTGAAACTTCTTCACCTAATAAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGTTTAATATCCTCAAAGAACAAGTTG # Alternate repeat : GTTGGTTTAATATCCTCAAAGAATCCCGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //