Array 1 529370-530810 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPB010000001.1 Hungatella sp. L12 CP_D2P_D3_59_ctg0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 529370 33 100.0 34 ................................. TTCTTCCTCGAACCTCATTTCGCAATCTACTGGC 529437 33 100.0 34 ................................. GATGAATCAGCAGAAACAACTATATCAATCAGGT 529504 33 100.0 35 ................................. TTAATGATCGTAGTATTAGCGGCAGTAGTCTGACC 529572 33 100.0 33 ................................. TTTACGGTATCGGTTACTAAATGACCATCTTTT 529638 33 100.0 35 ................................. CCGGTCACCGGATCCCGGGCACGGCGCTGCATTCC 529706 33 100.0 33 ................................. TCGAATCTCACCGCCGTTGCTGCATTTTTTGTA 529772 33 100.0 34 ................................. CTCTCAGGATATATCACAGGAACAGCTAGATGCG 529839 33 100.0 34 ................................. ATTAATGCACGAACTGGGGCACTTTATTATGGAT 529906 33 100.0 35 ................................. TTTAAATCCGGATCCACGATCCCTGCGGCTGCAAT 529974 33 100.0 34 ................................. GGCTCCAATCCGGTAATTTTCTGCCCGTCAATGA 530041 33 100.0 33 ................................. CCTAAATAACTATCCTGCGCCGTTTTGGTAATA 530107 33 100.0 34 ................................. TGGAAACAGTACTTCGCCCATGTATGCTTCCGTT 530174 33 100.0 34 ................................. TTTCACAAACGTAGTCTATCAGTTTCATTCTCCT 530241 33 100.0 34 ................................. ACGGATACGGTTTATGCACATCCAGCAACAGCCG 530308 33 100.0 33 ................................. TCATTATGACGGAGTTGCCGCCTCCTGCATTTG 530374 33 100.0 34 ................................. CTTTGACGTCGAAAATGACGCCAGTGCCGTGAAC 530441 33 100.0 34 ................................. TGTACGCTGTATCATACATATTTGCTTTGCCATA 530508 33 100.0 35 ................................. TCATACCATTTTACCCGGCGCTCCATCTTCTCCGG 530576 33 100.0 35 ................................. TTACAGTTTGGCGCACAGAAAATATAACGTACTCG 530644 33 100.0 34 ................................. TGCACTAACATAATCGGCATACATTAATGTCTGG 530711 33 100.0 34 ................................. ACGGATCCGCCAAAGCTGTCAATCCGACTGGAAG 530778 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 22 33 100.0 34 GTCTCCGCTAGCGATAGCGGAGTGGATTGAAAT # Left flank : CGCCATTTTTCTGGAAGTAGGAGGCGTTTTTCAAGATGTTAGTGCTGATTACCTATGATGTAAATACCGAGACCGCTGAGGGGAAAACAAGGTTGCGTAAAGTTGCAAAGCAATGTGTAAACTATGGTACCAGGGTACAAAATTCAGTTTTTGAATGTATTGTGGATAATGCCCAGTGCGTGATGTTAAAAGCGGTGTTGAAAGATCTGATTGATGTGAATGTTTACAGTCTGAGGTTTTATTATTTGGGTAACAAACATGACACGAAGGTGGAACATTTTGGTGTAGAGAAGGGAGTAAATGTAGAAAAACCTCTTATCTTTTAGAAGCGAATTTATGGTGCGAACCGGAAGTGATCATAAATTCCCTGAGAGGTTCGCACCGGAAATTTTGCAGTTATGCAGGGAGTATTGGGAAATTGGATATATTGATTTAATGAAAAGTATGCAAAATGCATATAATTATTGCTGGTTGTATGGTATAATATATGCGAATTTGCT # Right flank : TACACCCGCAGCTATGAACATCTCAGCTTTGTAGACGCTTCCGCCATCGCTAGCTGTGTGTTTTAAAATCGTAAGATTATTGCAGAAATAAATCGTTGAGGGGACTCCATTCAGTAATAGCAGAGTATATTAAATTTATGCAAAAAATCAGTTTATAAACGATAAAAGTAAATAGATAGGTTAAGGAGAGCAAAGAGTGAAGTACATTTTTATACATGGACTTGGACAGGGGCCAGATAGTTGGAATAAAACAGTTTCCTGCATGAGAGAACAGGAAGAGATTCAATGTCTGAACGTATTTGCATTTAAAGAGGGATCAGAGATTTCATACAGAAAAGTATATAAGGCTTTTTCGACGTATTGTGAGTCTATAAAAACGGAGTTTGGACTTTGTGGTCTTTCTTTGGGCGCTGTGATTGCGTTAAATTATGTGGTGGAGCATCCGGGAAGGGTAAAGTCGCTGGTCTTGATAGGGGGACAGTGCGTGATGCCGAAGGGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTAGCGATAGCGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 1 66648-64968 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPB010000003.1 Hungatella sp. L12 CP_D2P_D3_59_ctg0003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 66647 32 100.0 35 ................................ GTAGAGTTGTTATGGCTCATGAACTTGGACACGCT 66580 32 100.0 33 ................................ AAAAAGACAACGGATCTCGGCTATGACATGGCG 66515 32 100.0 34 ................................ AGTCTACCTTCCAGAATGCATACGACAATCTGAC 66449 32 100.0 33 ................................ TTCTCTGCGAGCACGGGAAAGGCATCGAGCGCC 66384 32 100.0 34 ................................ CAGCATATACGGGATACGATTTCGACTGCCGGGA 66318 32 100.0 34 ................................ TTTTAGGTGGCGGAGTAAGCTCTGGTTCCTTTAC 66252 32 100.0 34 ................................ TTTTAGGTGGCGGAGTAAGCTCTGGTTCCTTTAC 66186 32 100.0 35 ................................ GATTTGTAAAGAGGAATTTTTATCCAGCCAAAAAA 66119 32 100.0 35 ................................ AATCTCTTTTACAATGTCACGCTCTGGAATTATAT 66052 32 100.0 33 ................................ CGGCTCATATGCGCCTCCATCTTTCCAGTCTTC 65987 32 100.0 34 ................................ ACCCGTTGGATAGTCCGCGTACAAATTACCAGTA 65921 32 100.0 34 ................................ AAGTTCAGAAACTTTGAAGGTATTCCGCTTATAC 65855 32 100.0 34 ................................ ATTTTCTTTGGTCCACCCGTAGTACTCCATCTGT 65789 32 100.0 35 ................................ TCCTTATAAAATGTTTCTTTCAACATACTTTAAAA 65722 32 100.0 33 ................................ TTTTGTCCATGGAATATCCCCCTTCGATTTTTT 65657 32 100.0 33 ................................ AGGTTATTATTGAGGCGCAGACGAAGCCATACC 65592 32 100.0 34 ................................ CGGAACACAGGTCATATACCAACCCTTCAAAGTT 65526 32 100.0 33 ................................ AACAGATCGAGTTATCACGAACCGGATTAATTT 65461 32 100.0 34 ................................ CATGGAATATCCCAAGGAGCCGCAGACAGGCGCC 65395 32 100.0 33 ................................ TGTAAAAAGCCGAGACGAAGCAGGGCGATATCT 65330 32 100.0 35 ................................ AGTCTGATTGGAGTGCGACGGATTCTGCGTCCGAC 65263 32 100.0 35 ................................ CCGAAGCCCTCTTTTACCGCAGTGCTCACCGCGCT 65196 32 100.0 33 ................................ TAAATCAGATCGTGAGTAGTGACGGCTTGATGT 65131 32 100.0 35 ................................ GATTGTATACTGCGTTCCATCTTTAAGCTGTGCCG 65064 32 96.9 33 ...............T................ ATCAATATCAATTCTACATGAAACCGGTATGTG 64999 32 87.5 0 .......................AT.....GT | ========== ====== ====== ====== ================================ =================================== ================== 26 32 99.4 34 GATCAGGCTCTTGCGAGCCTGCGGATTGAAAC # Left flank : GGAAATGAGGTGATGGATTTGCTCGTACTGATAACCTATGACATTAATATTACTGAAGCTGCAGGGGCGCGACGTTTAAGGCGTGTAGCTAAGCAATGTGTAAATTACGGTACACGAGTGCAGAATTCTGTTTTTGAATGTCAAGTAGATGCAACACAATACGTGAAACTAAAGCATCTTCTGTTGAAGGAAATTGACGAAGAAAAGGACAGCTTGCGTTTTTACTCGCTGGGCAATCATTACAATGGTAAGGTTGAGCATTATGGCGTACGGCGTGGAATACAGGTGGATGAGCCCTTAATTTTATGAAAAAACGGAGATAATAGGTCTGTATTTGTCCGTGCGAACCCTAAGTGAACATAAATTCTGTGGGAGGTTCGCACCTGAATTTTAGGATGAATTGGAGGAGATTTGTATAAAAAAGTAAAAAGCAATGTGAAAATTGGTTGATTGCAATAAAAAAGTAATGTGTAATTGCTTTGGATTTGTAAGTATTTGCT # Right flank : TGTAGCATTGAAATTTGCACAGAGTCAGCTTGATGTAGGAGTAAGTTTACTTGAAATTTAAGATAGTTCAAAATTAAAGTTCAGGAAGGTAAAATGTAAAGTAATTCTCTACAATCAATAAATGATTATTACTGTTGGTCTAAAATGAATAATAACTGCTCTGAGAGAAAACGGAATACAAAATATAATATCGCACAGGAGAGTTTGGGGAAATAGTTCTTGGTCCAAAATGTAAAATGACTACGGCAGATGTAGAGTTTTTATTAAGTTCTTGGGGATACAACTGCGTGGGAGAAAATGTATATGACCAGAGAAGTATATACATACATCATACTGAATTGTCGTATAGATAAATAACTTATTATTAAAAGAAAGTTTTAATAGCGGAGAAATAGAGCGAGAGACAACTGTTCAAAAATTTTGAGTAGTTTAAAAAGATGGCAATCGGTCTGTGAATTGCGAAATTGGACACTTTAATTTAGATGTAATCATATCCGCTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCAGGCTCTTGCGAGCCTGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.90,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 123726-123360 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPB010000006.1 Hungatella sp. L12 CP_D2P_D3_59_ctg0006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 123725 33 100.0 34 ................................. ATCTGGGACAGGACTTACTGGGGGTCAATTTAAG 123658 33 100.0 33 ................................. ACCCCCTCAACGAGCACGGGATAAATTTCACCC 123592 33 100.0 34 ................................. ATGTGAATATAGAAGGTTCCCACACCACTCTCAT 123525 33 100.0 33 ................................. GGACAAATACAGCGGGGAAAGTTATGTTTTCCC 123459 33 100.0 34 ................................. ATCCATGCCAGTGCTGCATGGCCATAGTCAGCCC 123392 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ================================== ================== 6 33 100.0 34 GTCACCTTCTGCGAGGAAGGTGTGGATTGAAAT # Left flank : TTTTTATGATAAGGAGTACAGAAAGGCATTGAACATCTGCGGAACAAAATCCGGACGTGACTGCGACAAGGTAAAGGAGGCAGGTCTGACTCCCTATTTTATCGACGGTACCACAGCATTCGAGGAAGCAAATATGATTTTTGTCTTGCGGAAACTGTACTCCGATCCCATGCCGGCTGAAAATTTACTGGATCGGGAAATTGATCAGAAATGTTATCCGAATAAAGACTATCATACTATGTATGTATCGGAGATTGTGAAAGTGCTTGTGGCAGAATGTTAAGCTGTATAATTGTGAAGGGATTTTTAGTAGATGGGGAGATAAGGAAGTGAAATGCTGGTGCGAATCTCAAGTAAACATGAAAATACTGGGGGATTCGCACTGGGAAAATGAGGGAGTATGAAGCAGAAGGAAGATAGCTATTGATTTTTTTGAAAAATATTGTACAATATAGTTAAAAATGTGGGTGGGTAGTGGGGGAATGTTGTGGAGAATTGCT # Right flank : TTCGAGGAATATATGGATTGGAATAACCATATCCCCCCTTCCAACCTTTCTTCACAACAAAAAGAACCTTCAGAAAGCAAATGCTTCTAAAGGTTCTTTTTTTCTGATAACAACATCCACTCTAATCCCCAAGATAATAAACCGCCGTAAAATACCCCTTACTATTATAATAAAGCGCATTCCCAAGTACGCTGCTGTCAGCCAGCGCCTCCGTCTCCCCGCCGCTCTCCGATGCACCAGCACAAATCTCCATCTGAGTTTTCGATGCTTCTGCCAGGCTGGTATAAGCGCCTGTCACGGCTCCTTTCAGAATGTAAATGTCCCCCTCATATACCGTCTTCATCACAGTGTCTGCGCTGGTCTGCCACAAAGTATAGGTTCCATTTTCCAGATCTGCGATGACTCCTGTTTCACTGCCTTGTGAGGAAGGCAGTGTTCCCTTGTCATACATCAGATAGCCGTATGAATTCGAGTCTCCTGCATTGGGATCCAGGGAAAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCTTCTGCGAGGAAGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //